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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCGGATGCATCAAGTGTCAAATGTAGATTCCAAATTCTAGTTCCAATATTGTGCTTGAGACGTTGCTCCTCTAAACTTAAAACAAGGTTCAAATTACGCCTAACAGAACACAGGAAAGTCAAAGATGATCATTCTTTTCTCCAAGTTGAAGAAAATGTTGGAGGAACCGCACTAGCAAGGAATAGTCTCAAAAGAAAGTGAAGGATTCTGAATATATATCACCTTCAAATGGAGGGTGGAATAGGGAAATGATAGAGATTCTTTGAAAAAGTATGCTTCCTGTCATTTTCAGCTCATCATCACCAGAGAATCCCATGGAAATGACTCATGGTCAGCTTCCAATGACTTCCTAG mRNA sequence ATGTCGGATGCATCAAGTGTCAAATGTAGATTCCAAATTCTAGTTCCAATATTGTGCTTGAGACGTTGCTCCTCTAAACTTAAAACAAGGTTCAAATTACGCCTAACAGAACACAGGAAAGTCAAAGATGATCATTCTTTTCTCCAAGTTGAAGAAAATGTTGGAGGAACCGCACTAGCAAGGAATAGTCTCAAAAGAAACTCATCATCACCAGAGAATCCCATGGAAATGACTCATGGTCAGCTTCCAATGACTTCCTAG Coding sequence (CDS) ATGTCGGATGCATCAAGTGTCAAATGTAGATTCCAAATTCTAGTTCCAATATTGTGCTTGAGACGTTGCTCCTCTAAACTTAAAACAAGGTTCAAATTACGCCTAACAGAACACAGGAAAGTCAAAGATGATCATTCTTTTCTCCAAGTTGAAGAAAATGTTGGAGGAACCGCACTAGCAAGGAATAGTCTCAAAAGAAACTCATCATCACCAGAGAATCCCATGGAAATGACTCATGGTCAGCTTCCAATGACTTCCTAG Protein sequence MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALARNSLKRNSSSPENPMEMTHGQLPMTS*
Homology
BLAST of CsaV3_7G000040 vs. NCBI nr
Match: KGN44079.1 (hypothetical protein Csa_020576 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 3.4e-39 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA 60
MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA
Sbjct: 1 MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA 60
Query: 61 RNSLKRNSSSPENPMEMTHGQLPMTS 87
RNSLKRNSSSPENPMEMTHGQLPMTS
Sbjct: 61 RNSLKRNSSSPENPMEMTHGQLPMTS 86
BLAST of CsaV3_7G000040 vs. ExPASy TrEMBL
Match: A0A0A0K574 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169600 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.7e-39 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query: 1 MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA 60
MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA
Sbjct: 1 MSDASSVKCRFQILVPILCLRRCSSKLKTRFKLRLTEHRKVKDDHSFLQVEENVGGTALA 60
Query: 61 RNSLKRNSSSPENPMEMTHGQLPMTS 87
RNSLKRNSSSPENPMEMTHGQLPMTS
Sbjct: 61 RNSLKRNSSSPENPMEMTHGQLPMTS 86
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN44079.1 | 3.4e-39 | 100.00 | hypothetical protein Csa_020576 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K574 | 1.7e-39 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169600 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 58..86 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 60..86 |
Relationships
The following mRNA feature(s) are a part of this gene:
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