CsaV3_6G052150 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G052150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	F-box protein SKIP19-like
Location	chr6: 30356133 .. 30359620 (+)
RNA-Seq Expression	CsaV3_6G052150
Synteny	CsaV3_6G052150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATGTGTGCAAGCGGGCTGTTGATCGTGGTTGTGATCGGTCGACATGAATATTGAGCATTTTGGCTCTGATGAGTTGCTCCGATACATCGCTATCAGGTAACCATTGCCTGTGCGTCATGAACTTGTGGTTTTAAGTTAGTTTTGAAATCACAGATAGTCTATTTTATACATGTTTCTTAGTTATATTTTATAAATTTTATCTAATTTTCTGTCTTTGTTGATCATGAGTTACGTACACATTTACTTATCCAGTTCAAATCAAGTTAGAAAACGTCGGGTTACAGTAAACAAATGATGGATTGAGAGCAGCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGGTTGAAGTAATTACGCTCCAATGTGTTCCCACCAGTTTCCTCTAGAATTTACCATTCCCATGATTTCTCTGGTCTCGCGATTATTATCTCGACGATGTTCTTGATATGATATATTTTTATTTGGGGCATTTTTTATGGTTGGTACGGTGAAGTTATTTTGTTAGAAAGGTGGAAATTGGTATGCATGCTTTTTTGTTAGCTTTGAGTGCTATGTGGTCGAGAATTATTGATATATATTACGTACTGTCATGTTGTTGTTGATATTGATGTGCACATGAGGGGATCAGCAAAAACTGTATTTTGGTATTTTCATAAATTATAAACTCGGTTACCAAAGTTCTTTTATTCAATTATGTTCAATTACAATTTTATGCAATAAGTACGCCGTGTAAATATTGCTTTTTTAGAAGTGAAAAGGTTAAAATAACTGTGTTTTAAAAAATAAACATGAACAAATGTAGTAATTGATTTTTAGAAAATATATCACACTATTTATTGAAATTGCATAACAGAAATGCTAATGCTACCATAGCATTTTGATAATGCTACCATATCATTTTGATAATGCTACCATAGCATTTTGCAAATGGATAGAAAAACAAAGGAGTTTAATGGGGTTTTTTTTACGCATGGTCCTTTCCTTTTCAAGTGTTCAATCCAAATTTAACTCTCTTTTCAATAGTTAGATAAACTTTATAATTTGATTTTACAATTGGACAACTCAGTAATTTATTTCCATTTGATGACCAAACCCTAATTGATTGTCGTCTCCATTTCAAAATTTCACTCAAAACTCTCCCCAAAATTCACCATTGTCTATGATTCTGTTGAAGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAGTTGTTCTAACTTAAAAATCTCTTGACTTGCGCATGTGTTGTCATTTAGATTTTGAGGAAAACTTGAAAAAAAAAAGTGTCAAAAGGATCAAAACTTTGCGTCTGCCTGATCATTGGACTATGGGGATGGATTACGTGGGGAATTAACTACCGATGCGTATCATGACATGATCTTATGATTTATTTTGATTTGGGGCATTTTTTATGGTTGATACTTGATAAGATCATGAAGTTGTTTAGTTAGAAAAGGCGGAAATTGGGACATTTTTGTTAGCTTTGAGTGCTATGTGATCGAGAATTATCGATATATATTTTATGTATTATCATGTTCGTTATTGATACTGATGTGTGCACATCAGGATCAGCAAAAATCTCTAAGTATGGTTATGAAAGTTATTTTATCCAATTATTATATTTAATTACAGTTTTAGGCTGAAAAAAGTTAAAATAATTGTTTTTTAAAGAAATAAACACAGAACAAATGTATAGTAACTGATTTATAGAAAATTGATCACACTATTTATTGAAATTGCATGACAAAAATGCTAATGCTACCATAGGATTTGCTAATGCTCCCTTTTCCAACCAGACAATTACCCACATAGGAAAATAAATTGAAAATTATAAAAAATATATTGAAGAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTTTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCATCTTGACCACTGGTGAATTCAACTATCGTTTCTTACTGAGGGATGATTTCGACTACTCAGACTACCGTAGACATGGTTACTCGAGGGACGACGGTTTCTTTGACTAAGAGCAATTAATCAACGTCCTCTTTCCATTCCAATTAAATCTAACCACTGTTTTGTTTTATGGGTATCTTATATTCCAAGTAACGGATGTAACTAAGCAAACTTTGGACTGCATTTATGTTTTTGTGTGTAGAAGTAATTGTATAGGGCTGTATTGAAACTTTTTTGTAATTAAACTGATGGATTGTATGTCATAACAAAAAAGATGATTGGGTTTTTATGTTCCATTTACTTGGTAAAAAAAGTCATTTATGGATGATTTGGTTCAAGGTTTAAAGGAAATGAAAGATAACCCTATTTGGTTATTGTGCATGAAGATGCAGTTAAGATTTTAGGAACAAATATTTTTATTTTATTTTATTTATGAAATTAAATTTAATAATCTCGAATAACGCTCAGAAATAAATTAATTAAAGAATAAATATCATTTATTATGTTGATAAAAATATTTAAGAATCTATTACACCTCTAATGGTAAATATTTGGATCAAAAGTATCTCACTTGAAATAAACAAAACATATTAAACCCGCATGGTTCAGGTTTATATCTTTATTTAATTTGATTCTCAATATAGAAAAATAAAATCCAAAGTTTCTTTACAAAGATTGAAAGAAAAAGTAATTCAAATTTTTATTTAGTAAAAAAGAGAAACAAATCATCGTATGA

mRNA sequence

ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTTTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCATCTTGACCACTGTAAAAAAGAGAAACAAATCATCGTATGA

Coding sequence (CDS)

ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTTTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCATCTTGACCACTGTAAAAAAGAGAAACAAATCATCGTATGA

Protein sequence

MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKENVKGSKLLRQIVRHTRLHGNLRFAKNLTCGVFLIFKTKPPQTLNPLLKWVKLSVYCRSGFISSSDEAALAIAETMTKLADLAIVGNRLTSFGLHALLDKIENGMIGDNDEAFAIPFTIVLILKKIPFWHLDHCKKEKQIIV*

Homology

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BLAST of CsaV3_6G052150 vs. NCBI nr
Match: KAE8647757.1 (hypothetical protein Csa_003460 [Cucumis sativus])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
           MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY
Sbjct: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60

Query: 61  WNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLRE 120
           WNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLRE
Sbjct: 61  WNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLRE 120

Query: 121 AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEH 180
           AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEH
Sbjct: 121 AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEH 180

Query: 181 LKENVKGSKLLRQIVRHTRLHGNLRFAKNLTCGVFLIFKTKPPQTLNPLLKWVKLSVYCR 240
           LKENVKGSKLLRQIVRHTRLHGNLRFAKNLTCGVFLIFKTKPPQTLNPLLKWVKLSVYCR
Sbjct: 181 LKENVKGSKLLRQIVRHTRLHGNLRFAKNLTCGVFLIFKTKPPQTLNPLLKWVKLSVYCR 240

Query: 241 SGFISSSDEAALAIAETMTKLADLAIVGNRLTSFGLHALLDKIENGMIGDNDEAFAIPFT 300
           SGFISSSDEAALAIAETMTKLADLAIVGNRLTSFGLHALLDKIENGMIGDNDEAFAIPFT
Sbjct: 241 SGFISSSDEAALAIAETMTKLADLAIVGNRLTSFGLHALLDKIENGMIGDNDEAFAIPFT 300

Query: 301 IVLILKKIPFWHLDHCKKEKQIIV 325
           IVLILKKIPFWHLDHCKKEKQIIV
Sbjct: 301 IVLILKKIPFWHLDHCKKEKQIIV 324

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BLAST of CsaV3_6G052150 vs. NCBI nr
Match: XP_011658525.1 (putative F-box/LRR-repeat protein 23 [Cucumis sativus] >KGN49440.1 hypothetical protein Csa_003071 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-46
Identity = 118/238 (49.58%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
           MI+KRE PARNWLELPAEV+ VIL KLGA+EILTTAQNVCSL YKICKDPFLWRVI+   
Sbjct: 1   MIQKREVPARNWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHN 60

Query: 61  WNRVHNFEDWN----------------------------------------------RLF 120
              +++F+                                                  L+
Sbjct: 61  SGDLNSFDHLEIMCKHAVDRSCGQLVEINIEHFGSDELLLYIANSSKQVRRLRLMGYSLY 120

Query: 121 YWKNQFGI----FHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIATF---- 180
           + K   G+          L+I+S  IGL+P+TLRTIGRCCHLLKSLKL+E     F    
Sbjct: 121 FTKEVLGVAVSELPLLEHLEIQSFIIGLDPETLRTIGRCCHLLKSLKLKELCYIGFISSS 180

Query: 181 -EVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKE 184
            E  LAIA+ MP LHHLEIVG  ITN GLHALL  CS LQSLDL +   +DFDEHLK+
Sbjct: 181 DEDALAIAETMPNLHHLEIVGNSITNFGLHALLDSCSGLQSLDLRKCMYLDFDEHLKK 238

[Close]

BLAST of CsaV3_6G052150 vs. NCBI nr
Match: KAA0052509.1 (F-box protein SKIP19-like [Cucumis melo var. makuwa] >TYK13315.1 F-box protein SKIP19-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-32
Identity = 94/183 (51.37%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
           MIRK EAPARNWLELPA+V+ +ILQKLG +EILTTAQNVC L YKICKDP LW VI+   
Sbjct: 6   MIRKPEAPARNWLELPADVIFMILQKLGTIEILTTAQNVCFLWYKICKDPLLWCVID--- 65

Query: 61  WNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLRE 120
              +HN  D N   +                      LE      + R C L        
Sbjct: 66  ---MHNSGDLNSFDH----------------------LEIMCKHAVERTCGLF------- 125

Query: 121 AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEH 180
             I++ E  LAIA+ MPKLHHLEIVG  ITN GLHALL  CSDLQSLDL +   +DF+E 
Sbjct: 126 --ISSDEDALAIAQTMPKLHHLEIVGNRITNFGLHALLDSCSDLQSLDLRKCRYLDFEEL 151

Query: 181 LKE 184
           LK+
Sbjct: 186 LKK 151

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BLAST of CsaV3_6G052150 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-26
Identity = 95/249 (38.15%), Postives = 135/249 (54.22%), Query Frame = 0


Query: 6   EAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINF----DYW 65
           EA ARNWL+LPAEV+ +IL KLGA+EILT+AQNVCS   KICKDP +WRVI+     + +
Sbjct: 10  EAEARNWLDLPAEVMSMILLKLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMRNSGNLY 69

Query: 66  NRVHNFE---------------DWNRLFYWKNQ--------------FGIFHCWSILK-- 125
           +  H+ E               D N  ++  ++                +  C+ I    
Sbjct: 70  DMDHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITQSSNQLRRLRLADCYDISDEG 129

Query: 126 ----------IESLQI---GLEPKTLRTIGRCCHLLKSLKLREAA-----IATFEVPLAI 185
                     +E L+I     + +TL+T+GRCC LLK LKL E       + T +  LAI
Sbjct: 130 LTEAISRLPLLEHLEIFIYSFDVETLKTVGRCCPLLKWLKLIEEQYWREDMVTNKEALAI 189

Query: 186 AKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHL-KENVKGSKLL 201
           A+ MPKL HL+I+G  +TN+GL A+L  C DL+SLDL + + ++ +  L KE  +  K+L
Sbjct: 190 AETMPKLRHLQIIGNGLTNMGLQAILDGCPDLESLDLRQCFHLNLNGQLGKECAERFKVL 249

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BLAST of CsaV3_6G052150 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-25
Identity = 86/220 (39.09%), Postives = 116/220 (52.73%), Query Frame = 0


Query: 9   ARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVI---NFDYWNRVH 68
           ARNWLELPA++  +IL KLGA+EIL++AQ+VCSL  KICKDP +WRV+   N   W+  +
Sbjct: 11  ARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDY 70

Query: 69  NFE---------------DWNRLFYWKNQ--------------FGIFHCWSILK------ 128
           + E               D N  ++  N+                I  C SI        
Sbjct: 71  DLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITDTGLSEA 130

Query: 129 ------IESLQIGL---EPKTLRTIGRCCHLLKSLKL-----REAAIATFEVPLAIAKHM 177
                 +E L+I L     KTL T+GRCC LLKSLKL     R   I      +AIA++M
Sbjct: 131 VSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENM 190

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BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17
Identity = 73/233 (31.33%), Postives = 109/233 (46.78%), Query Frame = 0


Query: 5   REAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWN-- 64
           ++   RNW ELP+++   IL +LGA+EIL  AQ VC   +++CKDP +WR I+ D  N  
Sbjct: 174 KDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDR 233

Query: 65  ----------------RVH----NFEDW----NRLFYW-------KNQFGIFHCWSILK- 124
                           R H      E W    N L  +           G+  C+ I   
Sbjct: 234 AAFKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDE 293

Query: 125 -----------IESLQIG---LEPKTLRTIGRCCHLLKSLKLREAAIATF------EVPL 184
                      +E L++       ++LR IGR C  LK+LKL  A    F      +   
Sbjct: 294 GVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAK 353

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16
Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 0


Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINF----DYWNRVHN 70
           NW ELP E+   IL +LGA+EIL  AQ VC    ++CKDP +WR I+     D  +  +N
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 71  FEDWNRLFYWKNQFG-----------------------------IFHCWSI--------- 130
            E   R    ++Q G                             +  C  I         
Sbjct: 78  LEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAV 137

Query: 131 --LKIESLQI---GLEPKTLRTIGRCCHLLKSLKL-REAAIATFEVPLAIAKHMPKLHHL 190
             L +E L++       ++LR +G+CC  +K+LKL +       +  LAIA+ MPKL HL
Sbjct: 138 VKLPLEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMPKLRHL 197

Query: 191 EIVGICITNLGLHALLVRCSDLQSLDLSESW----LMDFDEHLKENVKGSKLLRQIVRH 198
           ++ G  +++ GL+A+L  CS+L+ LDL   +    + D  +   E+VK       +VRH
Sbjct: 198 QLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVK-------VVRH 249

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12
Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVI--------NFDYW 69
           RNW++LP E+   IL +L   +IL  AQ VC    +ICKDP +WR I        NFD+ 
Sbjct: 44  RNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFV 103

Query: 70  NRVHNFEDWNR-----------------LFYWKNQ----FGIFHCW----------SILK 129
           +   +  D ++                 L Y  ++     G+  C+          +I K
Sbjct: 104 SMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAK 163

Query: 130 I---ESLQI--GLEPKTLRTIGRCCHLLKSLKLRE-------------------AAIATF 184
           I   E+L++        L+ IG  C  LK+LKL                       +   
Sbjct: 164 IPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECD 223

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 67/240 (27.92%), Postives = 103/240 (42.92%), Query Frame = 0


Query: 2   IRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYW 61
           + K E    NW ELP ++L  IL +L  +EIL  A+ VC    ++ KDP +WR I+    
Sbjct: 17  VMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNL 76

Query: 62  NRVH-----------------------NFEDW-----NRLFYWKNQ-------------- 121
            R++                       N + W     + L Y   +              
Sbjct: 77  RRLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQI 136

Query: 122 --FGIFHCWSIL----KIESLQIGLEPKTLRTIGRCCHLLKSLKL---REAAIATFEVPL 181
              GIF     L    ++E L   +E +  +TIG+ C  LK+LKL         +    L
Sbjct: 137 TSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDAL 196

Query: 182 AIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLM----DFDEHLKENVK 187
           AIA  MP L HL+++   +TN+GL+A+L  C  L+ LDL + + +    D +    E +K
Sbjct: 197 AIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIK 256

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.9e-11
Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 0


Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWNRVHNFED 69
           RNW ELP E+   IL +LGA+EIL  AQ VC    ++C+DP +WR I+      + N  +
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 70  WNRLFYW---------------------------------------KNQFGIFHCWSILK 129
              LFY                                          + G+  C  +L 
Sbjct: 79  ---LFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLS 138

Query: 130 ------------IESLQI----GLEPKTLRTIGRCCHLLKSLKLREAAIATF--EVPLAI 172
                       +E L I     +  + L+ +G+ C  L++LKL          +V LAI
Sbjct: 139 RGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAI 198

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL
Match: A0A0A0KI84 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525270 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 118/238 (49.58%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
           MI+KRE PARNWLELPAEV+ VIL KLGA+EILTTAQNVCSL YKICKDPFLWRVI+   
Sbjct: 1   MIQKREVPARNWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHN 60

Query: 61  WNRVHNFEDWN----------------------------------------------RLF 120
              +++F+                                                  L+
Sbjct: 61  SGDLNSFDHLEIMCKHAVDRSCGQLVEINIEHFGSDELLLYIANSSKQVRRLRLMGYSLY 120

Query: 121 YWKNQFGI----FHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIATF---- 180
           + K   G+          L+I+S  IGL+P+TLRTIGRCCHLLKSLKL+E     F    
Sbjct: 121 FTKEVLGVAVSELPLLEHLEIQSFIIGLDPETLRTIGRCCHLLKSLKLKELCYIGFISSS 180

Query: 181 -EVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKE 184
            E  LAIA+ MP LHHLEIVG  ITN GLHALL  CS LQSLDL +   +DFDEHLK+
Sbjct: 181 DEDALAIAETMPNLHHLEIVGNSITNFGLHALLDSCSGLQSLDLRKCMYLDFDEHLKK 238

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL
Match: A0A0A0KP25 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525280 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.8e-38
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
          MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY
Sbjct: 6  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 65

Query: 61 WNRVHNFEDWNRLFYWKN 79
          WNRVHNFEDWNRLFYWKN
Sbjct: 66 WNRVHNFEDWNRLFYWKN 83

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL
Match: A0A5D3CNY7 (F-box protein SKIP19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009390 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33
Identity = 94/183 (51.37%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDY 60
           MIRK EAPARNWLELPA+V+ +ILQKLG +EILTTAQNVC L YKICKDP LW VI+   
Sbjct: 6   MIRKPEAPARNWLELPADVIFMILQKLGTIEILTTAQNVCFLWYKICKDPLLWCVID--- 65

Query: 61  WNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLRE 120
              +HN  D N   +                      LE      + R C L        
Sbjct: 66  ---MHNSGDLNSFDH----------------------LEIMCKHAVERTCGLF------- 125

Query: 121 AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEH 180
             I++ E  LAIA+ MPKLHHLEIVG  ITN GLHALL  CSDLQSLDL +   +DF+E 
Sbjct: 126 --ISSDEDALAIAQTMPKLHHLEIVGNRITNFGLHALLDSCSDLQSLDLRKCRYLDFEEL 151

Query: 181 LKE 184
           LK+
Sbjct: 186 LKK 151

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-25
Identity = 86/220 (39.09%), Postives = 116/220 (52.73%), Query Frame = 0


Query: 9   ARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVI---NFDYWNRVH 68
           ARNWLELPA++  +IL KLGA+EIL++AQ+VCSL  KICKDP +WRV+   N   W+  +
Sbjct: 11  ARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDY 70

Query: 69  NFE---------------DWNRLFYWKNQ--------------FGIFHCWSILK------ 128
           + E               D N  ++  N+                I  C SI        
Sbjct: 71  DLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITDTGLSEA 130

Query: 129 ------IESLQIGL---EPKTLRTIGRCCHLLKSLKL-----REAAIATFEVPLAIAKHM 177
                 +E L+I L     KTL T+GRCC LLKSLKL     R   I      +AIA++M
Sbjct: 131 VSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENM 190

[Close]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-22
Identity = 87/237 (36.71%), Postives = 120/237 (50.63%), Query Frame = 0


Query: 9   ARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINF----DYWNRV 68
           ARNWLELPA+V  +IL KLG V+ILT AQ+VCS   KIC+DP +WRV++     D+W+  
Sbjct: 16  ARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMD 75

Query: 69  HNFEDWNR---------LFYWK-NQFG-------------------IFHCWSILK----- 128
           ++ E+  R         L Y K   FG                   + +C  I       
Sbjct: 76  YDLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRLVYCNRISDEGLIK 135

Query: 129 -------IESLQI---GLEPKTLRTIGRCCHLLKSLKLREAAIATFEV---PLAIAKHMP 188
                  +E L+I     + +TL T+G+C  LLKSLKL        E     LAIA++MP
Sbjct: 136 AVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMP 195

Query: 189 KLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHL----KENVKGSKL 191
            L HL+I G  +TN GL A+L  C DL+SLDL + + ++    L     E +K  +L
Sbjct: 196 NLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNLRL 252

[Close]

BLAST of CsaV3_6G052150 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 7.8e-18
Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 0


Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINF----DYWNRVHN 70
           NW ELP E+   IL +LGA+EIL  AQ VC    ++CKDP +WR I+     D  +  +N
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 71  FEDWNRLFYWKNQFG-----------------------------IFHCWSI--------- 130
            E   R    ++Q G                             +  C  I         
Sbjct: 78  LEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAV 137

Query: 131 --LKIESLQI---GLEPKTLRTIGRCCHLLKSLKL-REAAIATFEVPLAIAKHMPKLHHL 190
             L +E L++       ++LR +G+CC  +K+LKL +       +  LAIA+ MPKL HL
Sbjct: 138 VKLPLEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMPKLRHL 197

Query: 191 EIVGICITNLGLHALLVRCSDLQSLDLSESW----LMDFDEHLKENVKGSKLLRQIVRH 198
           ++ G  +++ GL+A+L  CS+L+ LDL   +    + D  +   E+VK       +VRH
Sbjct: 198 QLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCFESVK-------VVRH 249

[Close]

BLAST of CsaV3_6G052150 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVI--------NFDYW 69
           RNW++LP E+   IL +L   +IL  AQ VC    +ICKDP +WR I        NFD+ 
Sbjct: 44  RNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFV 103

Query: 70  NRVHNFEDWNR-----------------LFYWKNQ----FGIFHCW----------SILK 129
           +   +  D ++                 L Y  ++     G+  C+          +I K
Sbjct: 104 SMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLGVVNAIAK 163

Query: 130 I---ESLQI--GLEPKTLRTIGRCCHLLKSLKLRE-------------------AAIATF 184
           I   E+L++        L+ IG  C  LK+LKL                       +   
Sbjct: 164 IPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECD 223

[Close]

BLAST of CsaV3_6G052150 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13
Identity = 67/240 (27.92%), Postives = 103/240 (42.92%), Query Frame = 0


Query: 2   IRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYW 61
           + K E    NW ELP ++L  IL +L  +EIL  A+ VC    ++ KDP +WR I+    
Sbjct: 17  VMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNL 76

Query: 62  NRVH-----------------------NFEDW-----NRLFYWKNQ-------------- 121
            R++                       N + W     + L Y   +              
Sbjct: 77  RRLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQI 136

Query: 122 --FGIFHCWSIL----KIESLQIGLEPKTLRTIGRCCHLLKSLKL---REAAIATFEVPL 181
              GIF     L    ++E L   +E +  +TIG+ C  LK+LKL         +    L
Sbjct: 137 TSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDAL 196

Query: 182 AIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLM----DFDEHLKENVK 187
           AIA  MP L HL+++   +TN+GL+A+L  C  L+ LDL + + +    D +    E +K
Sbjct: 197 AIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIK 256

[Close]

BLAST of CsaV3_6G052150 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 70/253 (27.67%), Postives = 112/253 (44.27%), Query Frame = 0


Query: 2   IRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVIN---- 61
           ++K +    NW++LP E+   IL +L   +IL  A+ +C    +ICKDP +WR IN    
Sbjct: 30  LKKDDEERINWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDC 89

Query: 62  ----FDYWNRVHNFEDWNRLFYWKNQFGIFHCWSIL--------KIESLQIGL-EPKT-- 121
               FD+ +   +  D ++    +     F   S+L         ++SL I + EP T  
Sbjct: 90  LMYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNK 149

Query: 122 -------------------------LRTIGRCCHLLKSLKLREAA--------------- 181
                                    L+ IG  C  LK+LKL                   
Sbjct: 150 GVMNGIEKLPLLETLVIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPL 209

Query: 182 IATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQS-LDLSESWLMDFDEHL 194
           +   +  LAIA+ MPKL HL+++G  +TN GL+A+L  C  L+  LD+ + + ++   +L
Sbjct: 210 LECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNL 269

[Close]

BLAST of CsaV3_6G052150 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-12
Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 0


Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWNRVHNFED 69
           RNW ELP E+   IL +LGA+EIL  AQ VC    ++C+DP +WR I+      + N  +
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 70  WNRLFYW---------------------------------------KNQFGIFHCWSILK 129
              LFY                                          + G+  C  +L 
Sbjct: 79  ---LFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLS 138

Query: 130 ------------IESLQI----GLEPKTLRTIGRCCHLLKSLKLREAAIATF--EVPLAI 172
                       +E L I     +  + L+ +G+ C  L++LKL          +V LAI
Sbjct: 139 RGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAI 198

The following BLAST results are available for this feature:

BLAST of CsaV3_6G052150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647757.1	1.1e-186	100.00	hypothetical protein Csa_003460 [Cucumis sativus]	[more]
XP_011658525.1	2.8e-46	49.58	putative F-box/LRR-repeat protein 23 [Cucumis sativus] >KGN49440.1 hypothetical ...	[more]
KAA0052509.1	1.4e-32	51.37	F-box protein SKIP19-like [Cucumis melo var. makuwa] >TYK13315.1 F-box protein S...	[more]
XP_038883506.1	3.3e-26	38.15	F-box protein SKIP19-like [Benincasa hispida]	[more]
XP_022146630.1	6.2e-25	39.09	F-box protein SKIP19-like [Momordica charantia]	[more]

BLAST of CsaV3_6G052150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9V9	1.3e-17	31.33	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
Q9M0U9	1.1e-16	30.54	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
Q9M0U8	1.6e-12	28.27	Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE...	[more]
Q9M0U6	3.6e-12	27.92	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]
Q9S9V8	6.9e-11	27.40	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]

BLAST of CsaV3_6G052150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI84	1.4e-46	49.58	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525270 PE=4 ...	[more]
A0A0A0KP25	6.8e-38	100.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525280 PE=4 ...	[more]
A0A5D3CNY7	6.6e-33	51.37	F-box protein SKIP19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1CXS5	3.0e-25	39.09	F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV...	[more]
A0A6J1EGI8	4.0e-22	36.71	F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114331...	[more]

BLAST of CsaV3_6G052150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05460.1	7.8e-18	30.54	RNI-like superfamily protein	[more]
AT4G05470.1	1.2e-13	28.27	RNI-like superfamily protein	[more]
AT4G05490.1	2.6e-13	27.92	RNI-like superfamily protein	[more]
AT4G05475.1	1.3e-12	27.67	RNI-like superfamily protein	[more]
AT4G05497.1	4.9e-12	27.40	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..56 e-value: 9.8E-9 score: 37.0
None	No IPR available	PANTHER	PTHR38926	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 91..191
None	No IPR available	PANTHER	PTHR38926	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 5..60
None	No IPR available	PANTHER	PTHR38926:SF2	F-BOX/LRR-REPEAT PROTEIN 21-RELATED	coord: 91..191 coord: 227..283
None	No IPR available	PANTHER	PTHR38926:SF2	F-BOX/LRR-REPEAT PROTEIN 21-RELATED	coord: 5..60
None	No IPR available	PANTHER	PTHR38926	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 227..283
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 38..279
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 12..58 e-value: 9.2E-7 score: 28.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 9..56 score: 10.133335
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 79..288 e-value: 2.6E-13 score: 51.1
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 7..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G052150.1	CsaV3_6G052150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding