CsaV3_6G050280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G050280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	auxin-repressed 12.5 kDa protein-like
Location	chr6: 29329876 .. 29331688 (-)
RNA-Seq Expression	CsaV3_6G050280
Synteny	CsaV3_6G050280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATTAAACTTAGAATTTAGATATTTCAAATATTAACTTAAAAAATAAAATAAAATACACTGTAATTAAGTGATTTATTAAACATACTTCGCGTCGAAGTTTGAAAATAAAATAATTAAAGACTGTAGCCCACAATGCCAATATACTATGTGATCATGGCTCGATAGTAATAAGTACATTAAAAAGGAAAAAAAAAAAGAATTAACCAACTCAAGAAGCTAAGTTAACCTTGGTTAATTGACCCCCCCTTTCTTACCTGTTGTTTAGTTAAGAGTGGATTGAAAAAAACATAGGTGCATAAATATTGGTAAAAAAAGATATTGGGGCTAAGGTCTATTTATAAAAGCATACACAAGATCACTACAGAATTGGGGTTCTAAACGAAGGTTGGAACTTGGAAGTGAAAAAGTTGATAAGCAATGGTTCTGCTTGAGACACTTTGGGATGATGTTGCGGCTGGACCTCAGCCTACCCGTGGCCTCGGCAAGCTCAGAAAACTCAGTACTAAGCCTTTGGTCGTTAAGGGTAATTCATTCATAATCTTCTTTTCATTCTGATAGTTAGTTTTGTTGATCATTTTGATACAAATTCCTTGTTGGTTTTAGATTTGGAAGGAGATGGAAGCAAATACCAAAGATCCACGTCTATGCCAGCCAGTCCGGCAACACCCACCACTCCGGTCACACCTGTCACGCCGTTAACAGCGGCGCGTAAGGATAATGTTTGGAGAAGCGTCTTCAACCCTGGTAGAAACTTTGCTACCAAGACTATTGGTGCTCAAGTCTTCGACAAACCTCAACCCAATTCTCCAACTGTTTATGACTGGTACGTACATCAACTTTTCACTGGGGCGACTGTAATCCACGCGCCGCCGAGTGGAATATAATTATGGTGATGGTGAAGTAAAATTAGATTCTGGGGTATCTTGTCCTTAATATTCCCAACAGTTGGTGGATGATAAAAAAAACGATTCGAAGTTCTGATTCCCCCGAGTGAAATCCAAAGCCGTCAGATCTGTTGACTTGGTCATGGTTCTGACATCTGAGGGCTTGGATGAGTCCTCTATTTTTGTCGTATATCAAACTGACATGAAACTCTTTGTTTTGCGGTTTCAGGCTCTACAGCGGTGACACCAAGAGCCAGCACCGTTAAGCGGTGGCTACGACGGCGGTTGAATGTAAATAGTGTCGTGTGTGGTGACGTGAGCCGGTGGGTTCTGGATGTGTATGTGAGATACATCTTCTAACTAGGTTTCTTCGCATCCGAGTTGTCCCAAGCAAGTTTTTATAATTGTAGTGTTAAATTTGTGTGAGTCTATAGTTAAGTAGGGGTTAAGTGTGCTGACACAGCCAATGATGGGACGACTACTTCATATAGTCCGCCGTGCAGGGCGGTGATAAAATTGGCTCATGATTGCCGTTTAAATAAAGATGGTGTTTTTTCTGTCATTGAATAAGTTGATATTTTATGATGCTGATAGCGCATTAAATTGTGATAATATCCAATCTTGATTACATAGATGGCGTGTAATTGTATTGAAATGTTAGTAATGGAATGGACCCACCAAGCTTTAAAAACCTCTACGGTGGGGGCCTACTTATTTCCACCTTGGCCCCACAAATGTATTAAAAGTTTGGGAAAATCCAAAAGGAATAATAACAAACAACAATACAAGCGGTTTATGGATAAGGATAGAGTCGTAATCAATGAGCTAGGTTGAAGGTTAGAATTATTACAACGTTTATTTTATTCAATCTTACATCATCGATTTTACTTTAATTCCATAACATCAATCTTAATTATTGGGCCAA

mRNA sequence

ATGGTTCTGCTTGAGACACTTTGGGATGATGTTGCGGCTGGACCTCAGCCTACCCGTGGCCTCGGCAAGCTCAGAAAACTCAGTACTAAGCCTTTGGTCGTTAAGGATTTGGAAGGAGATGGAAGCAAATACCAAAGATCCACGTCTATGCCAGCCAGTCCGGCAACACCCACCACTCCGGTCACACCTGTCACGCCGTTAACAGCGGCGCGTAAGGATAATGTTTGGAGAAGCGTCTTCAACCCTGGTAGAAACTTTGCTACCAAGACTATTGGTGCTCAAGTCTTCGACAAACCTCAACCCAATTCTCCAACTGTTTATGACTGGCTCTACAGCGGTGACACCAAGAGCCAGCACCGTTAA

Coding sequence (CDS)

ATGGTTCTGCTTGAGACACTTTGGGATGATGTTGCGGCTGGACCTCAGCCTACCCGTGGCCTCGGCAAGCTCAGAAAACTCAGTACTAAGCCTTTGGTCGTTAAGGATTTGGAAGGAGATGGAAGCAAATACCAAAGATCCACGTCTATGCCAGCCAGTCCGGCAACACCCACCACTCCGGTCACACCTGTCACGCCGTTAACAGCGGCGCGTAAGGATAATGTTTGGAGAAGCGTCTTCAACCCTGGTAGAAACTTTGCTACCAAGACTATTGGTGCTCAAGTCTTCGACAAACCTCAACCCAATTCTCCAACTGTTTATGACTGGCTCTACAGCGGTGACACCAAGAGCCAGCACCGTTAA

Protein sequence

MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR*

Homology

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BLAST of CsaV3_6G050280 vs. NCBI nr
Match: XP_004134697.1 (dormancy-associated protein 1 [Cucumis sativus] >KGN49243.1 hypothetical protein Csa_004438 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

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BLAST of CsaV3_6G050280 vs. NCBI nr
Match: XP_008439831.1 (PREDICTED: dormancy-associated protein 1-like [Cucumis melo] >KAA0052673.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa] >TYK13151.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 4.6e-58
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

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BLAST of CsaV3_6G050280 vs. NCBI nr
Match: XP_038881719.1 (dormancy-associated protein 1-like [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPLV+KDLEG+GSKYQRS S+PASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKISTKPLVLKDLEGEGSKYQRSMSLPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TP TAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

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BLAST of CsaV3_6G050280 vs. NCBI nr
Match: BAI52956.1 (auxin-repressed protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

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BLAST of CsaV3_6G050280 vs. NCBI nr
Match: XP_022925661.1 (auxin-repressed 12.5 kDa protein-like [Cucurbita moschata] >XP_023543678.1 auxin-repressed 12.5 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDD+ AGP+P RGLGKLRK++  P +VKDL+G+GSK   S SMP SPATPTTP
Sbjct: 1   MVLLEKLWDDIVAGPRPDRGLGKLRKITINPPIVKDLDGEGSK--GSLSMPNSPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRN ATKTIGA+VFDKPQPNSPTVYDWLYSG+T+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNLATKTIGAEVFDKPQPNSPTVYDWLYSGETRSKHR 118

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BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot
Match: O22611 (Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.1e-38
Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 3   LLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVT 62
           +L+ LWDD+ AGPQP RGL KLRKL+T    +KD +G  ++  RSTS+   P TPTTPVT
Sbjct: 1   MLDKLWDDIVAGPQPERGLEKLRKLTT---TLKD-DGASNQLMRSTSI---PTTPTTPVT 60

Query: 63  PVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 121
           P TP +A + DNVWRSVFNPG N ATK+IGA VFDKP PN+PTVYDW+YSGDT+S+HR
Sbjct: 61  PTTPSSARKVDNVWRSVFNPGSNSATKSIGAHVFDKPLPNTPTVYDWMYSGDTRSKHR 111

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BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.6e-37
Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLL+ LWDD+ AGPQP RGLG LRK+  +PL +KD EG+ SK          P TPTTP
Sbjct: 1   MVLLDKLWDDIVAGPQPERGLGMLRKV-PQPLNLKD-EGESSKI-------TMPTTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQH 120
           VTP TP+ +ARKDNVWRSVF+PG N ++KT+G QVFD PQPNSPTVYDW+YSG+T+S+H
Sbjct: 61  VTPTTPI-SARKDNVWRSVFHPGSNLSSKTMGNQVFDSPQPNSPTVYDWMYSGETRSKH 109

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BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot
Match: B9DGG8 (Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

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BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot
Match: P93017 (Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.9e-29
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 7   LWDDVAAGPQPTRGLGKLR-KLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVTPVT 66
           +WD+  AGP+P  GLG+LR K++T+PL +K + G+GS  +   ++  SP TPTTP     
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGV-GEGSSSKTVAAVAGSPGTPTTP----- 60

Query: 67  PLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGDTKSQHR 121
              +ARK+NVWRSVF+PG N AT+ +G  +FDKP  PNSPTVYDWLYS DT+S+HR
Sbjct: 61  --GSARKENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 108

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BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot
Match: Q9FKV8 (Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DRMH2 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQP-TRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTT 60
           M +LE LWDDV AGP+P   G G LR++ST  L   +   +G     S S+PASPATP T
Sbjct: 1   MGVLENLWDDVVAGPRPEAGGRGHLRRISTS-LTSLNNTTEGMSVAGSVSLPASPATPVT 60

Query: 61  PVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGDTKSQ 120
           P        + RK +VWRSVF+P  N  T+ IGA VFDKP  PNSPTVYDW+YS +T+S+
Sbjct: 61  P-------GSGRKVDVWRSVFHPASNVTTREIGANVFDKPSHPNSPTVYDWMYSNETRSK 114

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BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL
Match: A0A0A0KI43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518000 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.7e-63
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL
Match: A0A5D3CMW2 (Dormancy-associated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007620 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]

BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL
Match: A0A1S3B0B2 (dormancy-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484508 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]

BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL
Match: D1MWZ6 (Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitAuR PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL
Match: A0A6J1INZ7 (auxin-repressed 12.5 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478641 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.5e-49
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDD+ AGP+P RGLGKLRK++  P +VKDL+G+GSK   S SMP SPATPTTP
Sbjct: 1   MVLLEKLWDDIVAGPRPDRGLGKLRKITINPPIVKDLDGEGSK--GSMSMPNSPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRN ATKTIGA+VFDKPQPNSPTVYDWLYSG+T+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNLATKTIGAEVFDKPQPNSPTVYDWLYSGETRSKHR 118

[Close]

BLAST of CsaV3_6G050280 vs. TAIR 10
Match: AT1G28330.1 (dormancy-associated protein-like 1 )

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYDWLYSGD
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGD 120

[Close]

BLAST of CsaV3_6G050280 vs. TAIR 10
Match: AT1G28330.4 (dormancy-associated protein-like 1 )

HSP 1 Score: 165.2 bits (417), Expect = 3.2e-41
Identity = 83/126 (65.87%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYDWLYSGD
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGD 120

[Close]

BLAST of CsaV3_6G050280 vs. TAIR 10
Match: AT1G28330.3 (dormancy-associated protein-like 1 )

HSP 1 Score: 144.1 bits (362), Expect = 7.6e-35
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

[Close]

BLAST of CsaV3_6G050280 vs. TAIR 10
Match: AT1G28330.2 (dormancy-associated protein-like 1 )

HSP 1 Score: 144.1 bits (362), Expect = 7.6e-35
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

[Close]

BLAST of CsaV3_6G050280 vs. TAIR 10
Match: AT1G28330.5 (dormancy-associated protein-like 1 )

HSP 1 Score: 144.1 bits (362), Expect = 7.6e-35
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

The following BLAST results are available for this feature:

BLAST of CsaV3_6G050280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134697.1	1.4e-62	100.00	dormancy-associated protein 1 [Cucumis sativus] >KGN49243.1 hypothetical protein...	[more]
XP_008439831.1	4.6e-58	91.67	PREDICTED: dormancy-associated protein 1-like [Cucumis melo] >KAA0052673.1 dorma...	[more]
XP_038881719.1	6.6e-57	90.00	dormancy-associated protein 1-like [Benincasa hispida]	[more]
BAI52956.1	2.5e-56	88.33	auxin-repressed protein [Citrullus lanatus subsp. vulgaris]	[more]
XP_022925661.1	1.1e-48	80.00	auxin-repressed 12.5 kDa protein-like [Cucurbita moschata] >XP_023543678.1 auxin...	[more]

BLAST of CsaV3_6G050280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22611	7.1e-38	65.25	Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1	[more]
Q05349	4.6e-37	64.71	Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1	[more]
B9DGG8	1.1e-33	60.00	Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1	[more]
P93017	7.9e-29	54.31	Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 P...	[more]
Q9FKV8	1.7e-26	53.28	Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DRMH2 P...	[more]

BLAST of CsaV3_6G050280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI43	6.7e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518000 PE=3 SV=1	[more]
A0A5D3CMW2	2.2e-58	91.67	Dormancy-associated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B0B2	2.2e-58	91.67	dormancy-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484508 PE=3 ...	[more]
D1MWZ6	1.2e-56	88.33	Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitAuR...	[more]
A0A6J1INZ7	5.5e-49	80.00	auxin-repressed 12.5 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147864...	[more]

BLAST of CsaV3_6G050280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28330.1	1.1e-41	66.67	dormancy-associated protein-like 1	[more]
AT1G28330.4	3.2e-41	65.87	dormancy-associated protein-like 1	[more]
AT1G28330.3	7.6e-35	60.00	dormancy-associated protein-like 1	[more]
AT1G28330.2	7.6e-35	60.00	dormancy-associated protein-like 1	[more]
AT1G28330.5	7.6e-35	60.00	dormancy-associated protein-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008406	Dormancy/auxin associated protein	PFAM	PF05564	Auxin_repressed	coord: 7..120 e-value: 1.0E-53 score: 181.0
IPR008406	Dormancy/auxin associated protein	PANTHER	PTHR33565	DORMANCY-ASSOCIATED PROTEIN 1	coord: 1..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..67
None	No IPR available	PANTHER	PTHR33565:SF2	DORMANCY-ASSOCIATED PROTEIN 1	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G050280.1	CsaV3_6G050280.1	mRNA