
CsaV3_6G049400 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGAAAGCCACGGCCATCATAGACCCAATACTGGCTAGAACTTGCATTGATGAAATCATGAGATGCATCCATCTAGAATTACTGTGTGTTCAAGAAAATGTAGATATCCGACCAACCATGGATTCAGTTGTTTTCATGCTCAATTGCAACTCCGTCACTCTACTTGTACCGTTGCAGCCTGGATTTTTGCTGCAGAGCAATACCTCAAACTTGCCACAGCATCTTGATGATCACACAGAAGGACCACACCATAGTCTATCTGAGAGCTTTTATGTTGAAGAAGAATCGGGAAATCAGTATTCAGCTATTGATATTCAAGCTTACTAG ATGGAAGGGAAAGCCACGGCCATCATAGACCCAATACTGGCTAGAACTTGCATTGATGAAATCATGAGATGCATCCATCTAGAATTACTGTGTGTTCAAGAAAATGTAGATATCCGACCAACCATGGATTCAGTTGTTTTCATGCTCAATTGCAACTCCGTCACTCTACTTGTACCGTTGCAGCCTGGATTTTTGCTGCAGAGCAATACCTCAAACTTGCCACAGCATCTTGATGATCACACAGAAGGACCACACCATAGTCTATCTGAGAGCTTTTATGTTGAAGAAGAATCGGGAAATCAGTATTCAGCTATTGATATTCAAGCTTACTAG ATGGAAGGGAAAGCCACGGCCATCATAGACCCAATACTGGCTAGAACTTGCATTGATGAAATCATGAGATGCATCCATCTAGAATTACTGTGTGTTCAAGAAAATGTAGATATCCGACCAACCATGGATTCAGTTGTTTTCATGCTCAATTGCAACTCCGTCACTCTACTTGTACCGTTGCAGCCTGGATTTTTGCTGCAGAGCAATACCTCAAACTTGCCACAGCATCTTGATGATCACACAGAAGGACCACACCATAGTCTATCTGAGAGCTTTTATGTTGAAGAAGAATCGGGAAATCAGTATTCAGCTATTGATATTCAAGCTTACTAG MEGKATAIIDPILARTCIDEIMRCIHLELLCVQENVDIRPTMDSVVFMLNCNSVTLLVPLQPGFLLQSNTSNLPQHLDDHTEGPHHSLSESFYVEEESGNQYSAIDIQAY* Homology
BLAST of CsaV3_6G049400 vs. NCBI nr
Match: XP_011658514.1 (putative receptor-like protein kinase At4g00960 [Cucumis sativus] >KGN49154.1 hypothetical protein Csa_003972 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. NCBI nr
Match: XP_016899199.1 (PREDICTED: cysteine-rich receptor-like protein kinase 8 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 5.0e-43 Identity = 92/107 (85.98%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. NCBI nr
Match: XP_023544482.1 (cysteine-rich receptor-like protein kinase 29 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.7 bits (387), Expect = 9.4e-34 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. NCBI nr
Match: XP_022950182.1 (cysteine-rich receptor-like protein kinase 29 isoform X2 [Cucurbita moschata]) HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32 Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. NCBI nr
Match: XP_022950183.1 (putative receptor-like protein kinase At4g00960 isoform X3 [Cucurbita moschata]) HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32 Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy Swiss-Prot
Match: O23081 (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana OX=3702 GN=CRK41 PE=3 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 3.6e-12 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy Swiss-Prot
Match: O65468 (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-11 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy Swiss-Prot
Match: O23082 (Putative receptor-like protein kinase At4g00960 OS=Arabidopsis thaliana OX=3702 GN=At4g00960 PE=3 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-11 Identity = 42/85 (49.41%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy Swiss-Prot
Match: Q8S9L6 (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.2e-11 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy Swiss-Prot
Match: Q9C5S9 (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.8e-11 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy TrEMBL
Match: A0A0A0KJZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516620 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy TrEMBL
Match: A0A1S4DT85 (cysteine-rich receptor-like protein kinase 8 OS=Cucumis melo OX=3656 GN=LOC107990444 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43 Identity = 92/107 (85.98%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy TrEMBL
Match: A0A6J1GE76 (putative receptor-like protein kinase At4g00960 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111453352 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32 Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy TrEMBL
Match: A0A6J1GE39 (cysteine-rich receptor-like protein kinase 26 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453352 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32 Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. ExPASy TrEMBL
Match: A0A6J1GE34 (cysteine-rich receptor-like protein kinase 29 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453352 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32 Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. TAIR 10
Match: AT4G00970.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 41 ) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-13 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 70.5 bits (171), Expect = 9.8e-13 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. TAIR 10
Match: AT4G00960.1 (Protein kinase superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12 Identity = 42/85 (49.41%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. TAIR 10
Match: AT4G21410.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 29 ) HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of CsaV3_6G049400 vs. TAIR 10
Match: AT4G23140.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 6 ) HSP 1 Score: 68.2 bits (165), Expect = 4.9e-12 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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