
CsaV3_6G049220 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGTTTAAAATTAAAAAAATGACATTTTCTTATTTTCGAAAATAAGCTATTTTGCATAACATAAATAAAAAAGAAAGGGTTATGAATCTAAGATTTGCCATTTGCGACCCTTCTCCTTTACTTTTACAATTTTGACGAAAATCTCGTCGATCGATTCCTCTTCGTCTTCCTCCATAGATTTCTCATCAGGGCTCTGATCACATCCGTTTCTATATTCGATTTCAGTATCGCCAAACCGGCACTTCAGCCATGGTCTGCGAGAAGTGTAAGCCTCTTTCTCTCCTCTTACTGATTCACTACGAATTTTGACTACAATCGAGTAATTTTTCGATTTGTTCGCTGGTTCTTTTGATTTGTTTGTTTCCTTACTGAGTTGTTGGGAGTTGTGGATGCAGGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGTAAAATTAACGAAAACAAGCTCCTCTCCAAGAAGAAAAGGTTTGTTCTTTTTAATAATCTCCCTTGTGAATTTACCAATTAAATTGACTTTTTTATTAGTTTCTAGGGTTTTCTTTTTTTGTCCTTGGCTGATTCATCTAAACATTTACCCAGAAATATGAATTAGGGTTTATAATATGAAGTTCATGTACACAATAGAATATGCCCTGCCTTCAATTTAGAGACTTAGTGAATGTTTTGTCTAGGAGTTCATCTTGTGATTGTATAAATTATGCCATTCTGGAGATGAGAGCAGTAATGTCTACTTCTTAAACATGCTAATTGAATGTGATATTATATCAAATAGATTAACCTAGGCATATGACATTATCATTCTTACATAGCATATGAATAGCTAATCAATCCTCGATGTCAACTCATCGGTGGATCTTTTGTCAAGCATACACACGATACTTATAGTTCATGATTGAATGACATTTTGTTTCAAGGAGATTAGCTTAGGTTTATGCATATGAGTCTATGACTAATAGATGTTTTGTGTGAAACTGATCAACCCATCTTTCTTCTGGCTCATTCATCGAGTTGCAAAGTAAAAACCATCTGATATTCATTAAGCTCATCATTTGTAAAGGTTTGCAAGTCTATTCATTATTCTGAATGGTATGCTTGTAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACACCAGGATGGGAAGTATTGTCACACATGTGCTTACAGCAAAGGTATGAATTGCAGATGGAAATTTATCTTTGTTTTTATATCTACATACGTGGTTACAATACTACAACGCAATTATGTGTGAAATTGTATCACGCTTGGCAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTAATTAGTAGCCAGAAGTGATATTCAACTTGTAACTCATCAAGGGTTAACAACATGTACTTCAATCCTGATGTAATTTTCATCCCGGTATCCATCTATAGTTAATGACTTGATAGTTCCTTCAATTTCCTGATCTGACTTGAAGTGTAATTCAACCCAGAATTAACATTTGTTTGTTTAATGGAATTTATGTATTATAAACTTCTACCTCCTTTCCTTGCTAATGCAGTTACAACCTAATCTTTCACCCAATGTGATTGTTGTTGAGTTCTTTTCTTGAATAAAGATAGATAGTGTCTATATATCCTTTCTGAGTTGACAGATATTCTCTTCATCGATTATGGCTTCTATGACAATTAGCCATTGTTAAGAGCTTCTCTGTTCTAGCAAATATAAGGTTATATTGTTATATTGTAATTCAACACAAATTCTTATTGTTGTATTGTTAAGAATGGATTCAATACTTCTGGCGGCT ATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGTAAAATTAACGAAAACAAGCTCCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACACCAGGATGGGAAGTATTGTCACACATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTAA ATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGTAAAATTAACGAAAACAAGCTCCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACACCAGGATGGGAAGTATTGTCACACATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTAA MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV* Homology
BLAST of CsaV3_6G049220 vs. NCBI nr
Match: XP_004134750.1 (cysteine-rich PDZ-binding protein [Cucumis sativus] >XP_008439962.1 PREDICTED: cysteine-rich PDZ-binding protein [Cucumis melo] >KGN49130.1 hypothetical protein Csa_004040 [Cucumis sativus] >TYK13064.1 cysteine-rich PDZ-binding protein [Cucumis melo var. makuwa]) HSP 1 Score: 209.1 bits (531), Expect = 1.7e-50 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. NCBI nr
Match: XP_022950220.1 (cysteine-rich PDZ-binding protein [Cucurbita moschata] >XP_022979024.1 cysteine-rich PDZ-binding protein [Cucurbita maxima] >XP_023543320.1 cysteine-rich PDZ-binding protein [Cucurbita pepo subsp. pepo] >KAG6603763.1 Cysteine-rich PDZ-binding protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033931.1 Cysteine-rich PDZ-binding protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 206.8 bits (525), Expect = 8.2e-50 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. NCBI nr
Match: XP_038882901.1 (cysteine-rich PDZ-binding protein [Benincasa hispida]) HSP 1 Score: 206.8 bits (525), Expect = 8.2e-50 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. NCBI nr
Match: XP_021887355.1 (cysteine-rich PDZ-binding protein [Carica papaya]) HSP 1 Score: 203.4 bits (516), Expect = 9.1e-49 Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. NCBI nr
Match: XP_022142069.1 (cysteine-rich PDZ-binding protein [Momordica charantia]) HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy Swiss-Prot
Match: O70333 (Cysteine-rich PDZ-binding protein OS=Mus musculus OX=10090 GN=Cript PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-32 Identity = 69/101 (68.32%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy Swiss-Prot
Match: Q792Q4 (Cysteine-rich PDZ-binding protein OS=Rattus norvegicus OX=10116 GN=Cript PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-32 Identity = 69/101 (68.32%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy Swiss-Prot
Match: Q3ZC66 (Cysteine-rich PDZ-binding protein OS=Bos taurus OX=9913 GN=CRIPT PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.8e-32 Identity = 69/101 (68.32%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy Swiss-Prot
Match: Q567Z6 (Cysteine-rich PDZ-binding protein OS=Danio rerio OX=7955 GN=cript PE=3 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.8e-32 Identity = 67/101 (66.34%), Postives = 78/101 (77.23%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy Swiss-Prot
Match: Q9P021 (Cysteine-rich PDZ-binding protein OS=Homo sapiens OX=9606 GN=CRIPT PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.8e-32 Identity = 69/101 (68.32%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy TrEMBL
Match: A0A5D3CPV5 (Cysteine-rich PDZ-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006660 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 8.0e-51 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy TrEMBL
Match: A0A0A0KHE3 (Cysteine-rich PDZ-binding protein OS=Cucumis sativus OX=3659 GN=Csa_6G514910 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 8.0e-51 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy TrEMBL
Match: A0A1S3B0M5 (Cysteine-rich PDZ-binding protein OS=Cucumis melo OX=3656 GN=LOC103484593 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 8.0e-51 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy TrEMBL
Match: A0A6J1IVK1 (Cysteine-rich PDZ-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111478789 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.0e-50 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. ExPASy TrEMBL
Match: A0A6J1GF41 (Cysteine-rich PDZ-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111453377 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.0e-50 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of CsaV3_6G049220 vs. TAIR 10
Match: AT1G61780.1 (postsynaptic protein-related ) HSP 1 Score: 182.6 bits (462), Expect = 1.5e-46 Identity = 84/98 (85.71%), Postives = 88/98 (89.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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