CsaV3_6G048750 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G048750
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	chaperonin-like RBCX protein 1, chloroplastic
Location	chr6: 28565718 .. 28567166 (-)
RNA-Seq Expression	CsaV3_6G048750
Synteny	CsaV3_6G048750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACTGATACAGTAAGCACAAGCTTTGGAACTATCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTGTGGTTCCAGTTTTCTTCTGAAGTAATTTGCAATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTCTTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGCTTTCAAGCCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGTGGGTTCTCTCTCTCTCTCTCTTTCATTCTATTTTTATCCCAGATGTTTGTTTGTTTGTTTGTTTGTTTATCTGTGTTCAAAAATTAGGGTTTGGAGAGGCCTCACCAGAATCCAAGGCAGCCAGAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATAGTGACTGCGCAGCTTGAGGTTGCTCTTCAATTGCTTTGTTGTAATTGCTCTGCCATGTTGTTGTGTGGGTTTTCATTGGTATTGATTCTTGTTTTGGTAGAGCAGAGCTATAATCCAGAGGCGTACCTGGAGTTAATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCCAGTTTGATGCGGGAATCGTCAAGGCATAAAGCTCTTGGTAATACCCCAAATCTACTCTAGTTCTTTAGTTTGTCCAAATCTAGAGCGAGTTCATTAAGGGGCCAGAATTGCGTAAAAATAGAGTTTCTTAGAAGCATACAAAAAGAGGAATGAAATGCATGATCTTCATTCAGATGTTTTTCCTGGTTTCTTTTGGCCAAAACCTATCAGCATAGAAAACCAATGGTCAATAGATTCTACTTTAGTCAAGTCTGAAGAAAGATGAAGTTTATTGTTAATCAAGTTTCATATCTTGTTCTAACAATGAGGCTTCTAATTGTGGTAAATCTCTTGGCTTTGGCAGCATTGCGTATACTAGAGGTTAGTTCTGTACACTTAGTTGATGAATGCATCCCCACAGTGAAAAACACTCATAAGTAAGCGAATTGTTGATTCCAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCTTTCAAAGTAAGAAAAACTCGTACATTTCTCTGCCATTTTCCTAACAGCATTATGATCAGTTGCTTGCTACCCTACTGAGATTAATCATTGTTTTCAGATGGTTAGCGAATCCAACACAAGAATAATGAGGGAGTACTTGACAGAGACAAGTCCATCAGACACCGAGAAGTGACGAATTTCTGCATTGTGTTCACCTTTTGCAGCTAAACAGGAGGATACATAAATCCAGTGTGTATAATATGAGATGAGAGTGACAAAGAAAATGTAGCAAACCAAACCCAGTGTGGTAAAATATACAAAAACATTCATTCTGAATTCTTCTCAAGAACTACA

mRNA sequence

ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTCTTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGCTTTCAAGCCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCCAAGGCAGCCAGAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAGGCGTACCTGGAGTTAATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCCAGTTTGATGCGGGAATCGTCAAGGCATAAAGCTCTTGCATTGCGTATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCTTTCAAAGTAAGAAAAACTCGTACATTTCTCTGCCATTTTCCTAACAGCATTATGATCAGTTGCTTGCTACCCTACTGA

Coding sequence (CDS)

ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTCTTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGCTTTCAAGCCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCCAAGGCAGCCAGAAATCTGCACAATTTCTTCACGTATGTTGCTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAGGCGTACCTGGAGTTAATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCCAGTTTGATGCGGGAATCGTCAAGGCATAAAGCTCTTGCATTGCGTATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGCTTTCAAAGTAAGAAAAACTCGTACATTTCTCTGCCATTTTCCTAACAGCATTATGATCAGTTGCTTGCTACCCTACTGA

Protein sequence

MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFKVRKTRTFLCHFPNSIMISCLLPY*

Homology

[Close]

BLAST of CsaV3_6G048750 vs. NCBI nr
Match: KGN49472.2 (hypothetical protein Csa_003132 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKVRKTRTFLCHFPNSIMISCLLPY 173
           ALALRILEVRSAYCKNDFEWDNLKRLAFKVRKTRTFLCHFPNSIMISCLLPY
Sbjct: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKVRKTRTFLCHFPNSIMISCLLPY 172

[Close]

BLAST of CsaV3_6G048750 vs. NCBI nr
Match: XP_004134778.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           ALALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. NCBI nr
Match: XP_008440039.1 (PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo] >TYK13022.1 chaperonin-like RBCX protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 3.1e-76
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. NCBI nr
Match: XP_038881664.1 (chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 6.7e-71
Identity = 138/150 (92.00%), Postives = 141/150 (94.00%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           ME SARILS TQFPSLF LPNLNR NVFPV P KP+A K MRLHCSKMYVPGFGEASPES
Sbjct: 1   MEPSARILSSTQFPSLFPLPNLNRSNVFPVWPKKPKATKSMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAY ELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYQELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. NCBI nr
Match: XP_023003335.1 (chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 128/150 (85.33%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MES ARILSPT FPSLF LPNLNR N  PV P KP A K +RLHC KMYVPGFGEASPE+
Sbjct: 1   MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEA 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRHSLNDGDKFL++LMRESSRHK
Sbjct: 61  KAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLA K+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLASKM 150

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy Swiss-Prot
Match: Q94AU9 (Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-45
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 36  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELME 95
           R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL E
Sbjct: 35  RKCKQTRICSNKMYVPGFGEASPEAKAAKHLHDFFTYVAVRIVSAQLESYNPEAYMELRE 94

Query: 96  FLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFK 150
           FLD +S++DGDKF A+LMR SSRH  LALRILEVRSAYCKNDFEWDN+KRLAFK
Sbjct: 95  FLDTNSVSDGDKFCATLMRRSSRHMNLALRILEVRSAYCKNDFEWDNMKRLAFK 148

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy Swiss-Prot
Match: Q44177 (RuBisCO chaperone RbcX OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rbcX PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.0e-05
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           + A  L ++ TY AVR+++ QL   NP   + L EF  RH + + D +L ++M E   +K
Sbjct: 9   ETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLE---NK 68

Query: 121 ALALRILEVRSAYCKNDFEW 141
            L LRIL VR    +   E+
Sbjct: 69  ELVLRILTVRENLAEGVLEF 85

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL
Match: A0A0A0KMZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513450 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.6e-79
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           ALALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL
Match: A0A5D3CNU4 (Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006230 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL
Match: A0A1S3B054 (uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 145/150 (96.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPES
Sbjct: 1   MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPES 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK
Sbjct: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLAFK+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLAFKM 150

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL
Match: A0A6J1KRH1 (chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496972 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.4e-66
Identity = 128/150 (85.33%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRAFKPMRLHCSKMYVPGFGEASPES 60
           MES ARILSPT FPSLF LPNLNR N  PV P KP A K +RLHC KMYVPGFGEASPE+
Sbjct: 1   MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEA 60

Query: 61  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHK 120
           KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRHSLNDGDKFL++LMRESSRHK
Sbjct: 61  KAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHK 120

Query: 121 ALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           +LALRILEVRSAYCKNDFEWDNLKRLA K+
Sbjct: 121 SLALRILEVRSAYCKNDFEWDNLKRLASKM 150

[Close]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL
Match: A0A6J1BTL5 (chaperonin-like RBCX protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005638 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.6e-65
Identity = 128/152 (84.21%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MESSARILSPTQFPSLFSLPNLNRGNVFPVRPIKPRA--FKPMRLHCSKMYVPGFGEASP 60
           MESSAR+LSPTQFPSLF LPNLNR  VFP+ P KP+A  F  ++L C KMYVPGFGEASP
Sbjct: 1   MESSARVLSPTQFPSLFPLPNLNRSRVFPLWPTKPKASKFTRLQLQCHKMYVPGFGEASP 60

Query: 61  ESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSR 120
           E+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLDRHSLNDGDKFLASLMRESSR
Sbjct: 61  EAKAAKNLHNFFTYVAVRIVIAQLESYNPEAHVELMEFLDRHSLNDGDKFLASLMRESSR 120

Query: 121 HKALALRILEVRSAYCKNDFEWDNLKRLAFKV 151
           HK+LALRILEVRSAYCKNDFEWDNLKRLA K+
Sbjct: 121 HKSLALRILEVRSAYCKNDFEWDNLKRLASKM 152

[Close]

BLAST of CsaV3_6G048750 vs. TAIR 10
Match: AT4G04330.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 184.1 bits (466), Expect = 9.5e-47
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 0


Query: 36  RAFKPMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELME 95
           R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL E
Sbjct: 35  RKCKQTRICSNKMYVPGFGEASPEAKAAKHLHDFFTYVAVRIVSAQLESYNPEAYMELRE 94

Query: 96  FLDRHSLNDGDKFLASLMRESSRHKALALRILEVRSAYCKNDFEWDNLKRLAFK 150
           FLD +S++DGDKF A+LMR SSRH  LALRILEVRSAYCKNDFEWDN+KRLAFK
Sbjct: 95  FLDTNSVSDGDKFCATLMRRSSRHMNLALRILEVRSAYCKNDFEWDNMKRLAFK 148

The following BLAST results are available for this feature:

BLAST of CsaV3_6G048750 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49472.2	1.7e-93	100.00	hypothetical protein Csa_003132 [Cucumis sativus]	[more]
XP_004134778.1	1.1e-78	99.33	chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus]	[more]
XP_008440039.1	3.1e-76	96.67	PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo] >TYK13022.1 chape...	[more]
XP_038881664.1	6.7e-71	92.00	chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_023003335.1	1.1e-65	85.33	chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima]	[more]

BLAST of CsaV3_6G048750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU9	1.3e-45	78.07	Chaperonin-like RBCX protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q44177	3.0e-05	36.25	RuBisCO chaperone RbcX OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6...	[more]

BLAST of CsaV3_6G048750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMZ4	5.6e-79	99.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513450 PE=4 SV=1	[more]
A0A5D3CNU4	1.5e-76	96.67	Chaperonin-like RBCX protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B054	1.5e-76	96.67	uncharacterized protein LOC103484635 OS=Cucumis melo OX=3656 GN=LOC103484635 PE=...	[more]
A0A6J1KRH1	5.4e-66	85.33	chaperonin-like RBCX protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1BTL5	1.6e-65	84.21	chaperonin-like RBCX protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of CsaV3_6G048750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04330.1	9.5e-47	78.07	Chaperonin-like RbcX protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003435	Chaperonin-like RbcX	PFAM	PF02341	RcbX	coord: 61..148 e-value: 8.0E-28 score: 96.9
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 1..150
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	1.10.1200.210		coord: 48..159 e-value: 3.7E-47 score: 161.6
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	158615	RbcX-like	coord: 55..146
None	No IPR available	PANTHER	PTHR33791:SF12	CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G048750.1	CsaV3_6G048750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
molecular_function	GO:0044183	protein folding chaperone