CsaV3_6G047390 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G047390
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UPF0434 protein
Location	chr6: 27961082 .. 27969546 (+)
RNA-Seq Expression	CsaV3_6G047390
Synteny	CsaV3_6G047390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCTTCGGCTGTGTATTTAAAAAGCCTTTGGAAGAAGAAATCCAGACTGTGGAAAGGTTGAATACAACTCCTTCAAAACCTCTCCACTTTCTTCCGACTTCATTCTAAAATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTCATCATTATTCCTTTTCGATTCCATCATTTTCAGTCATTCTCCTCAATCTGTGGTGCATAATTTGGTTTTATTTTCTGTTTTTTCATTAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTATCACCTTGAATTCTGTAAAAAAAAAATTGTACTCCGCTATAATTCTTCATCTCTGACCATTTTCTGTTTTCATTGTGATTTTCTTTTTCCTTACTAGCTTTCTGGTTCTTCTTTTAGATCATCTAGGGTGCTGTAGCTGGTTTGTTTTATGAAGTATTTCTCAATTTTGCTAGGTTAGGTAGTAAAAATAGTTGTAGGGATCAGCATCTAGTGTTGAAACCTTTGCTTCTTTTTTTTTCTCTCCTGTTGGAATGCCATCAATCCATTATCTAGCACTATGAATGACCGAGCAAGCATAGGGTTCAGGGAGGTATTCGTATCATATGTTATTTACGATTATAGACTAAAGGTTTAGAGTTAGAGATATATATAAACTCTCTAATCTATTGATGCCCCTTTATTATATGATATGAATAAACTGTTCTCTCTTTGCTTAAAGATATAAGTAGCATAATAGTAGTGAACTACATGGATCTGTATGTTGATGGTTGTTATTTACGCTTTCTTGTTTTCTTTATTTGTCTGTTTTATAACACCCCTTGTTTGGGGGAGTTAGGTTATAGGACATCTGTTTGTTGTATGTTGTAATTTTGCATACTGTTGTGTTAGATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCACTGTTTAGTTTGGGGGTCGAAGACAGTTTTTATTTCTTGAGCTCAATAATCAGAAGAGATGTCAACATAACGCCACAACACTTCACACTTGTATTTGTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTCACTGGTGTTGCCCAATAAAATAGTCAGATTAGACCACTTGTCCACAGTTCTTTCTTAGGGTGATTTGAAATTGTTATGGTGGAAACTAAACAAGAGAATATCCTCTAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTGATTTGAAAAGTTGCTGGTTTAACCTACCTTTATTCCTTGTTTTCCGTAACATCAACTCCTTATCCTTTGGGTTTAACACAACATACCACAATCGCAGGTGATTTGATAATTGATAATATTTTTCTTCCATGAGGTGAGAAGAACGGGGAAACAGGCGGTGCCATAGTCACGATAGTTATGGTTATGGCTATTATCGTTATTATTATAGTTTTCTACCTTTACCAATTTACTGTTTTTCAAATTGTATAGTGGGCACCATCTCATTGAGTTCTTGATAGTTAAATGGGGGTTGAAGTGTGAAAAACTCTTTGATGGGTTTGCATTCATGCCATCGCAAAAGGCATCAAAGTTGAGTGGCAATATTCAATTGGCTGAGATTGTTCTCAATTCGGAACCAGTCAAGGTTATGCAATACATTTATATTAATTTTGTGAAACTCTTTTTTTAGTAGAGCTTCGTAACCTGATTTAGGAGACTTCTTGTGTAAAATGACGATGTTCAAGTGTTTGGTTTAGTTGTTAATTTCATTCTTCACCCTTGTTGATGCGAGTGAGAATAAATTATCCCGTCCATTTTAGGTGATCTTGTAATAAGTTGGACACGATATTATTTGAAATTTTTTAGACAATTGTTGTGAAAACAAGTGCATCCTTAGAAGCTAAAATTATGTCTGAGCTTGTATTGCATGAAATTCCTGATTTTGGGAGTTCTGTTTAAACTTATATATGTTATTAAGGGGAGCTATTAGAAATCACAAACCATAACCACCAATGGATTGACTAGACTAGCCATTTTGTCAAGGATGCTAAGGTGAGCTTTAAATTGGCATCATCTTCCATTCTAATTAATTGTAGAAGGTTTGATACCTAAAAAATCTGACTAAAAGTTAAACATGTTTTTCTTGGTATTTGAGAAAAAGTACTAAGAGATGTAGACTTCAAACAAATGGAACCATATAAATTATATAAATATACATGAACAAAAGCAATTTAGGGCATGTTCGGCCCGACGAGTAAATTGACAAACTAAAATTAATTATTGAACTTATTAGTGCCTTAACTTATGACGACTAAACAACTTTGTCTCTAATCCTCAACGCTTGGAGTTTAGGAACCTGGGAAATAGGGTTTATTTGGATTTAATTTTTAAGAAAGAAAAAAAGAAGAGAGAAAAATCACCAAACAAGTAAAATAAAGAAGAAGAAGAAGAGAAAAATCTCCCCACCCTGTTTATCCTATAGATGCATTTAACGAAATTCATACAAAGAGCAGCATATGAAACAGGATAAAGAACAAAAGGGTTGCGAGAAATGCAGAAATAATGTTAACTGGTATTCCAAATTCCCATTCTCAAGAATGTTTGTTCCGAAACAAAACGTATCAATAAAATGAAGATATGTCAAGCAAAATAATATATCAATTGGACAAAAAACTTCAGAACATATAATTAGGTGGGGAGTCCAATCTTCAGAAGTTCCTAATGCCTCATCATCATTCAAAGTTGAAAGATATTTATAGAGCAAAACGCCATGGCAAAGTCTCTGATAAAACAATAATAATAAAAGAAGATGGAAAGAACCTTCAAGATTTAGAACAGCAATTGCAGCTCTAGATACTCACCTTGCACAACGAAACTCAAAACATTTCCCAACTTCTTTTACCAATCACCGTGTTGTTTGTTTGTTCTCTCATTGAAGAGCTCGAAGTTCTCTGACCCCAAAGATATCAAAAAACCAGCTTAGGGGCAGCCATGGGGAAGCAAATCAAAATTCCCCCACATCATTAAGTACATGCCACCATCACCAAAAACCAAAATCACAACAAAAAAAGAATATAAACTTAAGAAACAAAGCATACCAGCCAGCCAACAGCAGCCCACAAAACCAAAAATGCTACCCTCCACCATAAAAGGAACTTCTGTTATAGTCTTTTTTTTTTTCTTTTTCTTAATAATTTTTTAAGTTTAAGTTATAGACTTTTTGTTTTTTCTTTTCTTTTTTTTTTTTTCTTTTTTTGTTTAGAAAAATTGTTCCTCCTCCTCTTCAACTTCAGCTTACCAATTTACTTGGCATCAAGAGAAGAGAATATTCGTCGAG

mRNA sequence

ATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGA

Coding sequence (CDS)

ATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGA

Protein sequence

MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALKDEDTVEITREK*

Homology

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_011658060.1 (uncharacterized protein LOC101219142 [Cucumis sativus] >KGN48943.1 hypothetical protein Csa_003028 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 2.6e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALKDEDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKDEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein [Cucumis melo var. makuwa] >TYK12522.1 UPF0434 protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 5.5e-37
Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+KALLKEA+SGFTNTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALK EDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKGEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida])

HSP 1 Score: 150.2 bits (378), Expect = 8.2e-33
Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MV+I+KALLKEA+SGFT TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIRDGIPCL
Sbjct: 1  MVKISKALLKEASSGFTKTLSEILVCPLSKQPLRYCEASNSLISDTICVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPK+GRIIE +DALK EDTVE+TREK
Sbjct: 61 VPKDGRIIETEDALKGEDTVELTREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo] >KAG7034074.1 hypothetical protein SDJN02_03801 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-30
Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIE DD LK EDTVEI REK
Sbjct: 61 VPKEGRIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_022977422.1 (uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEG IIE DD LK EDTVEI REK
Sbjct: 61 VPKEGTIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-11
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 1   MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
           + R  +  LK++ + F  TL Q LVCPLS++ LRY  ++N LI+D +G+++PI DGIP +
Sbjct: 41  VARSPEQSLKDSKT-FDPTLLQFLVCPLSRKSLRYEESTNELINDELGIAYPIVDGIPNM 100

Query: 61  VPKEGRIIENDDALKDEDTVEIT 84
           +P++ R+I  D   +  DT + T
Sbjct: 101 IPQDARMIHKDRKPESPDTEQTT 122

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.7e-10
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L Q LVCPLSK+PLRY A++N LI+D +G+++PI DG+P ++P+  R     +  K
Sbjct: 48  FHPALLQFLVCPLSKKPLRYDASTNELINDELGIAYPIIDGVPNMIPQAARTTRQKE--K 107

Query: 76  DEDT 80
            E+T
Sbjct: 108 QEET 109

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-09
Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L + LVCPLSK+PLRY A++N LI++ +G+++PI DGIP ++P+  R+   +   K
Sbjct: 50  FDQALLEFLVCPLSKKPLRYEASTNELINEELGIAYPIIDGIPNMIPQAARMTHQN---K 109

Query: 76  DEDTVE 82
            ++ VE
Sbjct: 110 KQEEVE 112

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-09
Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 10  KEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIE 69
           +E    F   L + LVCPLSK+PLRY A++N LI++ +G+++PI DGIP ++P+  R+  
Sbjct: 44  EEPPRDFDPALLEFLVCPLSKKPLRYEASTNELINEELGIAYPIIDGIPNMIPQAARMTR 103

Query: 70  NDDALKDEDTVE 82
                K ++ VE
Sbjct: 104 QS---KKQEEVE 112

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09
Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L Q LVCPLSK+PLRY A++N L+++ +G+++PI DGIP ++P+  R    ++  +
Sbjct: 48  FHPALLQFLVCPLSKKPLRYEASTNELVNEELGIAYPIIDGIPNMIPQAARTTRQNEKQE 107

Query: 76  DED 79
           + +
Sbjct: 108 EAE 110

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL
Match: A0A0A0KHC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALKDEDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKDEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL
Match: A0A5A7SJZ8 (UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001030 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37
Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+KALLKEA+SGFTNTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALK EDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKGEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL
Match: A0A1S3B2Q6 (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.6e-37
Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+KALLKEA+SGFTNTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALK EDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKGEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL
Match: A0A6J1GDI4 (uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC111453193 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIE DD LK EDTVEI REK
Sbjct: 61 VPKEGRIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL
Match: A0A6J1IIE0 (uncharacterized protein LOC111477769 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477769 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEG IIE DD LK EDTVEI REK
Sbjct: 61 VPKEGTIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. TAIR 10
Match: AT4G35905.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 3.7e-23
Identity = 50/76 (65.79%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVR+ + LLK+A +    TLS+ILVCPLSKQPLR+C  + SL+SDTIGVSFPI+DGIPCL
Sbjct: 1  MVRLNRVLLKDAGNVIDKTLSEILVCPLSKQPLRFCEKTKSLVSDTIGVSFPIKDGIPCL 60

Query: 61 VPKEGRIIEND-DALK 76
          VPK+G+I+E + DA K
Sbjct: 61 VPKDGKILEEEGDASK 76

The following BLAST results are available for this feature:

BLAST of CsaV3_6G047390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658060.1	2.6e-39	100.00	uncharacterized protein LOC101219142 [Cucumis sativus] >KGN48943.1 hypothetical ...	[more]
XP_008440859.1	5.5e-37	95.35	PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein...	[more]
XP_038883681.1	8.2e-33	86.05	UPF0434 protein Ecaj_0131 [Benincasa hispida]	[more]
XP_022949957.1	2.2e-30	82.56	uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 unchar...	[more]
XP_022977422.1	1.1e-29	81.40	uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G047390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5M8Z2	4.1e-11	40.96	Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1	[more]
Q5U1Z8	7.7e-10	46.88	Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1	[more]
Q2T9V7	2.2e-09	43.94	Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1	[more]
Q96I23	2.2e-09	41.67	Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1	[more]
Q9D1C3	2.9e-09	41.27	Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1	[more]

BLAST of CsaV3_6G047390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHC1	1.3e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1	[more]
A0A5A7SJZ8	2.6e-37	95.35	UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010...	[more]
A0A1S3B2Q6	2.6e-37	95.35	UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1	[more]
A0A6J1GDI4	1.1e-30	82.56	uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1IIE0	5.3e-30	81.40	uncharacterized protein LOC111477769 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsaV3_6G047390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35905.1	3.7e-23	65.79	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005651	Trm112-like	PFAM	PF03966	Trm112p	coord: 19..56 e-value: 9.0E-5 score: 23.0
None	No IPR available	GENE3D	2.20.25.10		coord: 23..79 e-value: 4.8E-17 score: 63.3
None	No IPR available	PANTHER	PTHR33505	ZGC:162634	coord: 1..79
None	No IPR available	PANTHER	PTHR33505:SF4	ZGC:162634	coord: 1..79
None	No IPR available	SUPERFAMILY	158997	Trm112p-like	coord: 17..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G047390.1	CsaV3_6G047390.1	mRNA