CsaV3_6G047080 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGCGAAGTAAACAAAACAAATCTCCCCCTTAATCAATTTCCTTAACCTCCTCCATTTCCCAACCTCCCTCTTTAAAACCCACTCCCCACACAATACACACATTATCCCACATCCATATTTTTATTATCACTCCCACTACTTTCATTTCCAAAATCTCTCCGCCCCGCCGGAGAGGTTAATTTCTTCAGCCGCAGAACATGGACGGAGAAGACGGTGGCGGGCGGCTGATTGTGAGAGGTAGAGCCGAGATTGATACTAGAGCGCCGTTCAGGTCGGTTAAGGAGGCAGTTGTGTTGTTCGGAGAAAGAGTTCTTGTTGGGGAAATTTATGCCAACAAAATTAAGGAAGTACGTATATTATTATAGCTTTCTATCGCTGTTTAACATAACAATGTTTTAATGAGTCCGAGACATGCACGAATGCCACGGATAAATTTATATTTCTGATCGTAACACAAAATAGTAAGTACTACATTGGTATTGGTGTAAATAATATATATGTTTAACTCTTTTTATGTTTATTTTCTAATTAAATTTTTTTCTAAATATATGATTGAATAATTTTCACATTTTATCATTGTTTTTATCGATATTAACTAAAGCTATATAGTTAAACGTGCAAAAAATTACAAGCACACGAATGTAACTTCCTGAATTGATTTTACATATTTAACCTATTGAATTATATGTTTGTTCATTGAGTTGTTTTTAAAAGAACAAAATATAGCGTAAGTATGCATTTCTTTTAGTTTCAACCATAAAAAAGTGAAGATAGATGATTTGAACTATTTGGACATTTGAATCACATATAACTTATCTAATTAGTTATACGAATTACTAAATTTATTCGGTAACCTAATCAGATCATTTAAAAGCCTTTATTTAATTATTTACAAGTATATTAAACAAAATATTAGTCTTATTTCTATTTTAAAATTTCGTATCCCATAAACTTTTAGCTATGAAATGTAATGTACATAATATATTTTGAAAGAAAGAATGATAACTAATTAACTAATGTTAAATGGTTATTTTATAACACTCTAATGGTAAAAAATAAGTTTTTTTTTTTTAAAAAAGCAGTTAGACCATCAGTATAATCTATATTCAAATTTCTCTGTTTGTAACTGATATATATACATCCTAATCTTATTTTTCAAAAGAGCCCTTAATTAGCTCCATCACTTATATTAGTAATGTATAAATGAATTAGGGTTCATTACAATCAGTTTAGTTCTGTCATATATCTTATTTATTACTTCAAGCTCATCTTTCCTTCCCTAATCATCATTTATACCCAACCAATACATAGGGCTTAACAACTTGATTTGATTAGTTCATTCTAGCTTTCTACTTTTGAAACATATCTTTTTTTATTCCACTTTCCATACTATGGATTTTACATTTTCTTAAAACATTTAATTTCTTAGTCGTAGTCTACAAATCAAAACACGATTTATTAAAATTATTGTTTTTTCTTTTTTCACATTTACACTATTTGACTGGTTTTTGAATTTTTTTTGTTAAAAGTGAATATATATGTATATATATTAAAATGAGTTCTATTTACAGATTATATAAAAAGTAAAATGCTATGGATCAAAGTTTGTAGAGTAGATTGTTACTTTAATAAATACTTAAAAGAACCAAAAATATTTTTTTCTAGCTTAATTAAATTCACGAGATAGAAAAAGAAAATTTAAAACAAAATGAAATAAAGTACCAGCATGCATGACATCAGAATGGTCTTTATACGAGAAATTAAAATTATATATGTGGCTTAGTCATGAATAATTTGATATTTCTTGACTGAATCCGTTATATTCTTTTTTTTAACCTCCTCTTACTGTGAATATATATCCTAAAATTCAATTGATAAACTTACAATGACACTATTCAGTAAATGTTTTAAATTTGTATTAATTAATTATCTATGGCTATTTATGATTTACTGGTTTAGATGAAGTGCATTGTATAAACCTATATGACATCTTCTTGTATTCTAAATTTGTGGGTATATATCAATCTTCTCTTACATTTTGATGTATTTATTTGTTTGGTGATTGCTGTAACATAGTTTTTTTCTTGAAAAAATTTTTCCAAAACTACTGAGTGTCTTGTTGATCAACACGTACAAAAAGATCAAATAGAGCATATGGTTTAGTAAGTTTTAGTTTTTTTTTTTTTTTTTATAAGATGGCGGAAGGAGGACAATCTCAAACTAGAATAGGTGTCTTAGCGGCGGAGCTAGAAGGAACAAAGGAAAGTCTAGAGAAAGCCAAAGAAGAGAACGGAGTATTAGCATTCTGCCTCCAATCTCTCACGGACGAGCTCGAGCGAACCAAACAAGAACTCGAAAAACTCAAGTCAATAGAACACCGAAGCCCGCACCGGCGCAACGATCATCGCCATCCGCTTTCACTAGCCCTGACAATGCATCCCGACGTGGACGAAGATCTCAAATTCGTAGAGAATGAAAAAGAATTAAACAGCAAAACAAACAACAATGCAGTGATATTGCAGAATAGGAGAAGTGTGAAATTTGCAAGTCCTCCTGAATTGGACCGAATCATGGTTAATAAGAATGAGGAGTTATTGTTGGCTCAAAAACCGTCATTATTATCGCCTCCGGGTTCTTCTTCTTCGGTTAAAAGGTCGAAAAAAAAGGGTTTGGTTCCTTTGATTGGATGGCTTTTCGCTAAAAAGAAGGGAAATTATTAAGAAGTTTGATTTTATATTTGAAAGTTTAAATTTGATTTCGAAATTTATAGATGTGATTATTTTGGCATGCAAGTTCAAATTGGTTTTTGTATGTCCTTTTAATCCTGGGTTTTGCATGCTCACGATTTTGGAGTTGTGTACTGTGTTGAGTTTTCGCATTGAATAAAAAAGCTTTGAAATTTTTCTTGTTTG ATGGACGGAGAAGACGGTGGCGGGCGGCTGATTGTGAGAGGTAGAGCCGAGATTGATACTAGAGCGCCGTTCAGGTCGGTTAAGGAGGCAGTTGTGTTGTTCGGAGAAAGAGTTCTTGTTGGGGAAATTTATGCCAACAAAATTAAGGAAATGGCGGAAGGAGGACAATCTCAAACTAGAATAGGTGTCTTAGCGGCGGAGCTAGAAGGAACAAAGGAAAGTCTAGAGAAAGCCAAAGAAGAGAACGGAGTATTAGCATTCTGCCTCCAATCTCTCACGGACGAGCTCGAGCGAACCAAACAAGAACTCGAAAAACTCAAGTCAATAGAACACCGAAGCCCGCACCGGCGCAACGATCATCGCCATCCGCTTTCACTAGCCCTGACAATGCATCCCGACGTGGACGAAGATCTCAAATTCGTAGAGAATGAAAAAGAATTAAACAGCAAAACAAACAACAATGCAGTGATATTGCAGAATAGGAGAAGTGTGAAATTTGCAAGTCCTCCTGAATTGGACCGAATCATGGTTAATAAGAATGAGGAGTTATTGTTGGCTCAAAAACCGTCATTATTATCGCCTCCGGGTTCTTCTTCTTCGGTTAAAAGGTCGAAAAAAAAGGGTTTGGTTCCTTTGATTGGATGGCTTTTCGCTAAAAAGAAGGGAAATTATTAA ATGGACGGAGAAGACGGTGGCGGGCGGCTGATTGTGAGAGGTAGAGCCGAGATTGATACTAGAGCGCCGTTCAGGTCGGTTAAGGAGGCAGTTGTGTTGTTCGGAGAAAGAGTTCTTGTTGGGGAAATTTATGCCAACAAAATTAAGGAAATGGCGGAAGGAGGACAATCTCAAACTAGAATAGGTGTCTTAGCGGCGGAGCTAGAAGGAACAAAGGAAAGTCTAGAGAAAGCCAAAGAAGAGAACGGAGTATTAGCATTCTGCCTCCAATCTCTCACGGACGAGCTCGAGCGAACCAAACAAGAACTCGAAAAACTCAAGTCAATAGAACACCGAAGCCCGCACCGGCGCAACGATCATCGCCATCCGCTTTCACTAGCCCTGACAATGCATCCCGACGTGGACGAAGATCTCAAATTCGTAGAGAATGAAAAAGAATTAAACAGCAAAACAAACAACAATGCAGTGATATTGCAGAATAGGAGAAGTGTGAAATTTGCAAGTCCTCCTGAATTGGACCGAATCATGGTTAATAAGAATGAGGAGTTATTGTTGGCTCAAAAACCGTCATTATTATCGCCTCCGGGTTCTTCTTCTTCGGTTAAAAGGTCGAAAAAAAAGGGTTTGGTTCCTTTGATTGGATGGCTTTTCGCTAAAAAGAAGGGAAATTATTAA MDGEDGGGRLIVRGRAEIDTRAPFRSVKEAVVLFGERVLVGEIYANKIKEMAEGGQSQTRIGVLAAELEGTKESLEKAKEENGVLAFCLQSLTDELERTKQELEKLKSIEHRSPHRRNDHRHPLSLALTMHPDVDEDLKFVENEKELNSKTNNNAVILQNRRSVKFASPPELDRIMVNKNEELLLAQKPSLLSPPGSSSSVKRSKKKGLVPLIGWLFAKKKGNY* Homology
BLAST of CsaV3_6G047080 vs. NCBI nr
Match: XP_004135029.2 (WEB family protein At3g51220 [Cucumis sativus] >KGN48911.1 hypothetical protein Csa_004180 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 6.2e-117 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. NCBI nr
Match: XP_008440814.1 (PREDICTED: WEB family protein At3g51220 [Cucumis melo]) HSP 1 Score: 380.6 bits (976), Expect = 9.6e-102 Identity = 203/231 (87.88%), Postives = 213/231 (92.21%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. NCBI nr
Match: KAA0025677.1 (WEB family protein [Cucumis melo var. makuwa] >TYK12552.1 WEB family protein [Cucumis melo var. makuwa]) HSP 1 Score: 345.1 bits (884), Expect = 4.5e-91 Identity = 187/224 (83.48%), Postives = 195/224 (87.05%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. NCBI nr
Match: XP_038883384.1 (WEB family protein At3g51220 [Benincasa hispida]) HSP 1 Score: 343.2 bits (879), Expect = 1.7e-90 Identity = 187/232 (80.60%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. NCBI nr
Match: KAG6603913.1 (WEB family protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 282.3 bits (721), Expect = 3.6e-72 Identity = 154/222 (69.37%), Postives = 180/222 (81.08%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy Swiss-Prot
Match: Q9SD24 (WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.9e-24 Identity = 90/223 (40.36%), Postives = 118/223 (52.91%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy Swiss-Prot
Match: O48822 (WEB family protein At2g17940 OS=Arabidopsis thaliana OX=3702 GN=At2g17940 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20 Identity = 80/217 (36.87%), Postives = 119/217 (54.84%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.0e-18 Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy TrEMBL
Match: A0A0A0KME9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505890 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy TrEMBL
Match: A0A1S3B2R8 (WEB family protein At3g51220 OS=Cucumis melo OX=3656 GN=LOC103485122 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 4.7e-102 Identity = 203/231 (87.88%), Postives = 213/231 (92.21%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy TrEMBL
Match: A0A5D3CMJ1 (WEB family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001340 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91 Identity = 187/224 (83.48%), Postives = 195/224 (87.05%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy TrEMBL
Match: A0A6J1ISF6 (WEB family protein At3g51220-like OS=Cucurbita maxima OX=3661 GN=LOC111478002 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 6.6e-72 Identity = 154/222 (69.37%), Postives = 178/222 (80.18%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. ExPASy TrEMBL
Match: A0A6J1GET1 (WEB family protein At3g51220-like OS=Cucurbita moschata OX=3662 GN=LOC111453530 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 4.2e-71 Identity = 152/222 (68.47%), Postives = 176/222 (79.28%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. TAIR 10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-25 Identity = 90/223 (40.36%), Postives = 118/223 (52.91%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. TAIR 10
Match: AT2G17940.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 101.7 bits (252), Expect = 8.0e-22 Identity = 80/217 (36.87%), Postives = 119/217 (54.84%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 92.0 bits (227), Expect = 6.4e-19 Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 88.6 bits (218), Expect = 7.0e-18 Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = 0
BLAST of CsaV3_6G047080 vs. TAIR 10
Match: AT5G55860.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 42.4 bits (98), Expect = 5.8e-04 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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