CsaV3_6G043950 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G043950
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 25937157 .. 25937306 (+)
RNA-Seq ExpressionCsaV3_6G043950
SyntenyCsaV3_6G043950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCCAGCAGGAGGGAAAGGAGCCGGCCGTGGCCAGAGTTGTTTTGTCAAGAAGTGGGACTTGGGAATTTGTCATTTTATTGGCACACAACATGGAGGTTTTGTATGGTGGAGTTTGGAACCACTTATACTTTACCTTTTTGGCTCACGG

mRNA sequence

CAGCCAGCAGGAGGGAAAGGAGCCGGCCGTGGCCAGAGTTGTTTTGTCAAGAAGTGGGACTTGGGAATTTGTCATTTTATTGGCACACAACATGGAGGTTTTGTATGGTGGAGTTTGGAACCACTTATACTTTACCTTTTTGGCTCACGG

Coding sequence (CDS)

CAGCCAGCAGGAGGGAAAGGAGCCGGCCGTGGCCAGAGTTGTTTTGTCAAGAAGTGGGACTTGGGAATTTGTCATTTTATTGGCACACAACATGGAGGTTTTGTATGGTGGAGTTTGGAACCACTTATACTTTACCTTTTTGGCTCACGG

Protein sequence

QPAGGKGAGRGQSCFVKKWDLGICHFIGTQHGGFVWWSLEPLILYLFGSR
Homology
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BLAST of CsaV3_6G043950 vs. NCBI nr
Match: KAE8647517.1 (hypothetical protein Csa_003308, partial [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 9.8e-23
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  QPAGGKGAGRGQSCFVKKWDLGICHFIGTQHGGFVWWSLEPLILYLFGSR 51
          QPAGGKGAGRGQSCFVKKWDLGICHFIGTQHGGFVWWSLEPLILYLFGSR
Sbjct: 1  QPAGGKGAGRGQSCFVKKWDLGICHFIGTQHGGFVWWSLEPLILYLFGSR 50

The following BLAST results are available for this feature:
BLAST of CsaV3_6G043950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647517.19.8e-23100.00hypothetical protein Csa_003308, partial [Cucumis sativus][more]
BLAST of CsaV3_6G043950 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G043950 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G043950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G043950.1CsaV3_6G043950.1mRNA