
CsaV3_6G043600 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAACATTTATAAAATATAGTAAAATTTTAGATTAGGGTGAATTTGAGTAAATTTAAAAATGTTTCTTAAATGTTAATAAAAAAGAAATGAAAAGAAAAAAAGAAAAAGGCTTTTGAGTCAAGTCAAACACTATCTCCATAAAAGGGACCCACATAAGAAAGCTTACTCACCGTCCATCGCCACTCATCAATCCTTATATAAACAACAACTACAATTTTCAAACCAAACAGAGAGATGCCACACACAGAAATGCCGAATCTATATTCTCCGCCCATGCTCAACCCCCGGATTTCTTCTTTCCTTTTAATCATCTTCTTAATTGCCGCTCCACGCTTCTTTCTCTATGTAGATTGCAGACCCCTCCGCCCCGGTTCACCCATAGATCGCCACCATGTTCATGATAATGCCTCTGCTCTTCCCCACAACGCCCCCCCGGAAACACAAAAAGCAGCAACGGCGCCTATAGATTCCGGTGCCCCGCCGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAAACCGATGGAACATATTCTTTGCCCATTTCATATTGCCAGATCTAATTTTTTGGCTTTATTCTTTGGGGTTGTAACTTCACTTGTAATATGTACATAACATACATACAATACAAGCTTCTTACTATACATATTTTTTTTTGTCCCCCTCATATAGAGGTTTTGGATTTTAGTCCTTAAATTTTTTTAATATCCACATTTTGGGATTACTTTTGGACTAAGGTAATTGTTGGAGAATTTAGCGCCTCGATAAATGTCTTAGATATTATAATTAAGCTCACCTTCGAGTTTCAGAGCTTATAAAAGTTTTGTATTTGAGCTCCTGCATTTGCATTAATATTTATTTTCACTCGTGGTTCTTTACTTTCAATTTCATGGAAATGCTAAATATTATAATTATT ATGCCACACACAGAAATGCCGAATCTATATTCTCCGCCCATGCTCAACCCCCGGATTTCTTCTTTCCTTTTAATCATCTTCTTAATTGCCGCTCCACGCTTCTTTCTCTATGTAGATTGCAGACCCCTCCGCCCCGGTTCACCCATAGATCGCCACCATGTTCATGATAATGCCTCTGCTCTTCCCCACAACGCCCCCCCGGAAACACAAAAAGCAGCAACGGCGCCTATAGATTCCGGTGCCCCGCCGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA ATGCCACACACAGAAATGCCGAATCTATATTCTCCGCCCATGCTCAACCCCCGGATTTCTTCTTTCCTTTTAATCATCTTCTTAATTGCCGCTCCACGCTTCTTTCTCTATGTAGATTGCAGACCCCTCCGCCCCGGTTCACCCATAGATCGCCACCATGTTCATGATAATGCCTCTGCTCTTCCCCACAACGCCCCCCCGGAAACACAAAAAGCAGCAACGGCGCCTATAGATTCCGGTGCCCCGCCGATCGGAGATGAAGGCGGTGGCGTAGCGTTTACTATGGCTTCGGGACCCAGCAGAAAGGGTGCTGGCCATTAA MPHTEMPNLYSPPMLNPRISSFLLIIFLIAAPRFFLYVDCRPLRPGSPIDRHHVHDNASALPHNAPPETQKAATAPIDSGAPPIGDEGGGVAFTMASGPSRKGAGH* Homology
BLAST of CsaV3_6G043600 vs. NCBI nr
Match: KAE8647506.1 (hypothetical protein Csa_003725 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 6.7e-53 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_6G043600 vs. NCBI nr
Match: TYK12856.1 (hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]) HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35 Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0
BLAST of CsaV3_6G043600 vs. NCBI nr
Match: KAG6604156.1 (hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.4 bits (202), Expect = 2.6e-12 Identity = 54/99 (54.55%), Postives = 66/99 (66.67%), Query Frame = 0
BLAST of CsaV3_6G043600 vs. NCBI nr
Match: KAG6595007.1 (hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09 Identity = 50/93 (53.76%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of CsaV3_6G043600 vs. ExPASy TrEMBL
Match: A0A5D3CR30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004480 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 8.0e-36 Identity = 88/106 (83.02%), Postives = 91/106 (85.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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