
CsaV3_6G043590 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGTTTAATGCTTGAAAAAAAAATTAAAAATTTTAAAAGGATAAAACGTAAGCTATGCAAAATGTAATCCTTCATGAATATATATTTTAGAAATAAATAAAAAAAGCTGATAAATTTGTTGGAGACGTAAAAGTGAGAAGGATGAAAAAAATAGAGAGCGAGGGAAACAAAGGAAAAGACGGAGAGAAAGAACACATCTAGGGTTTTTTCTTTTTCCTTTTACTTATTCAACCTTAATAAGAAAAACATCCATCATATTAAATTTAAAATGAATAATTACTAAAATTGAAAAAGATTAACGTGATCTAAATGAATAATTACTAAAATTGAAAAAGATTAATGTGATTTAAATGAATAATTACTAAAATTGAAAAAGACTAATGTGATCTATTTGAAATATAAACAAGTGATCCACTATAGTCTAGTCAAGTCATAATCAATTTTTTTAACTAGTTATAACAATTTTCTTAACATTTTTTTAAAATTCAATCGATATTTCCATAACTTGGGACTTTAATATTTTCATCAAATATCTATTACTTCAAAACTTGGTTAAAATTAGATTTATTATTAATGCATCAAATTTTTTTAGTTAAAATTAGTACTTATTCAACCTTAAAATTAAAAAATTAGCCTCTAAGTCTAGAATCAAGTTTTTTTAAAAAGAAAATAAATACAATGGAAACAACTAAAGCTGGAAACCTTTCGAAGTTAAAAAATCATAATTTTATTGTTTTGTTATATGGAGTAAATAGTTTTTTTTTTTTAAAAAAAAACAAAATAGTAAAGGAAAAACGATTCAAAATAAAAACATTAATTTTTTTTTAAAAAAATCAAACTTCAATCCCACCGAACTTATATTTTCAATTAACTTTCCAAATTTGTTTTGATATCAAATTTCCATTAAAAAAATTGAATATTCATAATTTTCTCCTCCGACGGAACTAAATATATATATATATATATATATTTTTGTTTTTCTTACTAAACAAATAAAAAACAATTCATAAGTTTATTTATTTATTTTATCTTACACCGACAAAATCTAAATATTAACGGATGAAACAAAATATATCAACAAATTCAAGTGTCAATAAATTTATATAAATAGATGCAACGAAAATACATTGTAATGAAAGACTAGCGTTAAATATATTAGCGATGTAAGAATATATATATAAAAATAGGAAGAAAAAATCGTATAAATGAAATACTAGTCGGTTAGATTTGATTTTTCTATGTCTTGATTTGTTGGGGGATAAAGCAAAAAAAAATAGTTGCTATGGTCTCTAACCATTCAAAATTGAACCAAGCTATAATAGACGTACTTAAGAAAATATTTTTTAAAATTTCAAGTATTTATATTTGGAGTGCATGTATGTTTGGTACATGAAAATAACAAAATAAACAAAAGGAAATAACCCGTCTTAATGTGGAAAAAAAAGGCTAGAAAAAAGTGATTTAAAATAAAAATAATTTAAAGATCAATAATTCTGGTGTTTCCACGTGTCGTGAAATTCTAAGTCAAACAAGTGGGTGTTTTTGATTGGAGGGAAGTCAGAGCATTAACGTAGCCATCGGGTTGGGACTGCCAAACCCTGCTGACTATCCCCCTGCAGCCTTCTAAACTTCAAACAACCTTCTAACAAGAAAACCACATTCAAATTCAACCTTCATATAATTCCAATCAAAACAATATATTATTTATTGAAGTGTTGAATTATTAAATGCAAAGAATATGCTCTACTATAATTAATCAAGGAAGAGAACAATTATTCTATTCTTGTAACTATACAATTCAAAGTGTTACATTGCATATTTAATTTTAAAATTAAATAAGTTTGTGCTCTTGTTTCAATTTAATATTAATATTTTAATTTTATTCTTTAATAAATTCTCAACGTCTATTAATTAATTTTAGAAAAATATAATTTATTAAGTTTTAGAACTTTACTCAAATAGTAGAGTGAAATATAGAAGTTACTTAAAATTTGAGACATAGTTAAAAATCAAATTGAAATAAAATTTAAATTTTAAAGAGTTAAAATTGTAACAAATAAAACATGTAAACGAGCAGATTAAAACCACACACAAAATTTAAACATTAAATACATAATTCTTGAAATCGATGGATGAACGGAAAACTAGACTTGAAAACTAAAAGTAAAAATGTATTATTTATTGAAAAATAAAAATATATATAATTTAATTTGATAATTAGGTAAACCGTGTAATTATGATATAGCCGGGCTGATGGACTTAAGTAATTAAGTTTTCCAAATGTCTCACTTACAAATTGGACTCGCAACCTCCCCTCTATACATTTTTCTCATTCAACGCCGAAGAAAATGGAAACTTAGAAACCTTTTCTCACATTCTTTCCTAAACAATGCCATCTCAAGAGAACCTCCCTCGATCTTTCCCATTTGATGTCCCACGTTTCATTGTCTACAACTTTGAAAATCTTGACACTTTCTTCCACAATAAATAAATAAGTAAATAAGTACCTTTTCCAACCACCCTCCTTCCCTATAAATACCTCCCAAACTCCCCCCATTAAATTCACATATACTTACACAAATTCCCCCCCATCTCTCAAGCCTACGTTACTATGAGGAGCATCACCAACATTTTCATCGGCTTCATTCTGGTGGCTGCGCTATTGGGCAATGGCGGGTTAGTTACTGTAACAGACGCCAGGCCATTGACCCTCATGCGCTTGGGCTCGGGCTCGGCGGCAACAATAGCTGAAGATTTCTTTGAAGGCCTTTCTTTGGGAGCCATTAAGCAGTCAGGTCCCAGCGCTGGTGGAGATGGTCACAAATTTGTTAATTACGACACGCTTGGAGGTATCAAGGATTCGGGCCCCGCACCTGGAGATGGACATAGACACATCACCTCCTCACATCATTGA ATGAAAGCCTACGTTACTATGAGGAGCATCACCAACATTTTCATCGGCTTCATTCTGGTGGCTGCGCTATTGGGCAATGGCGGGTTAGTTACTGTAACAGACGCCAGGCCATTGACCCTCATGCGCTTGGGCTCGGGCTCGGCGGCAACAATAGCTGAAGATTTCTTTGAAGGCCTTTCTTTGGGAGCCATTAAGCAGTCAGGTCCCAGCGCTGGTGGAGATGGTCACAAATTTGTTAATTACGACACGCTTGGAGGTATCAAGGATTCGGGCCCCGCACCTGGAGATGGACATAGACACATCACCTCCTCACATCATTGA ATGAAAGCCTACGTTACTATGAGGAGCATCACCAACATTTTCATCGGCTTCATTCTGGTGGCTGCGCTATTGGGCAATGGCGGGTTAGTTACTGTAACAGACGCCAGGCCATTGACCCTCATGCGCTTGGGCTCGGGCTCGGCGGCAACAATAGCTGAAGATTTCTTTGAAGGCCTTTCTTTGGGAGCCATTAAGCAGTCAGGTCCCAGCGCTGGTGGAGATGGTCACAAATTTGTTAATTACGACACGCTTGGAGGTATCAAGGATTCGGGCCCCGCACCTGGAGATGGACATAGACACATCACCTCCTCACATCATTGA MKAYVTMRSITNIFIGFILVAALLGNGGLVTVTDARPLTLMRLGSGSAATIAEDFFEGLSLGAIKQSGPSAGGDGHKFVNYDTLGGIKDSGPAPGDGHRHITSSHH* Homology
BLAST of CsaV3_6G043590 vs. NCBI nr
Match: KAE8647505.1 (hypothetical protein Csa_003084 [Cucumis sativus]) HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. NCBI nr
Match: TYK12857.1 (hypothetical protein E5676_scaffold255G004490 [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 8.2e-35 Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. NCBI nr
Match: KAG6595008.1 (PAMP-induced secreted peptide 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027036.1 hypothetical protein SDJN02_11045, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.8 bits (338), Expect = 4.4e-28 Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. NCBI nr
Match: KAF7828678.1 (PAMP-induced secreted peptide 2-like [Senna tora]) HSP 1 Score: 87.8 bits (216), Expect = 6.1e-14 Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. NCBI nr
Match: XP_030477329.1 (PAMP-induced secreted peptide 2-like isoform X2 [Syzygium oleosum]) HSP 1 Score: 85.5 bits (210), Expect = 3.0e-13 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy Swiss-Prot
Match: F4JRC5 (PAMP-induced secreted peptide 2 OS=Arabidopsis thaliana OX=3702 GN=PIP2 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.4e-05 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy TrEMBL
Match: A0A0A0KIE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491710 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy TrEMBL
Match: A0A5D3CLN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004490 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35 Identity = 80/97 (82.47%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy TrEMBL
Match: A0A059AZU8 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02229 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy TrEMBL
Match: A0A2P2NI55 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.6e-12 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. ExPASy TrEMBL
Match: D7TTE3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0129g01010 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. TAIR 10
Match: AT2G23270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, root, stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 8.3e-09 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of CsaV3_6G043590 vs. TAIR 10
Match: AT4G37290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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