CsaV3_6G042900 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G042900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	nuclear pore complex protein NUP58-like
Location	chr6: 25220537 .. 25226115 (+)
RNA-Seq Expression	CsaV3_6G042900
Synteny	CsaV3_6G042900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTTGTGATAGATTACTATTGGGAACTATTATACAAATAAACACATACAATGGTCTATTTTTTGGTTCATTTCGTTATATGAAAGTAACGTTTTTTTTAATTTTGAGAAAGTAGGCTTAATATTAATATTAATATTATTTTAATCTAACAACTGATATTTTTTAAAATAGAAAAATAAAGTTTGTGATCAATAAGTTGAGGATTCATCAAAGTCAGTGGGCCAATATATAGAAGAAGGTGCAGATATGGGCTGGGCCGTGTGGTTGAAGGTTCAGTCCAGCCCAATTAAAGAGGAGAAGGGAGGCGCTCACTGAAATATTTTTGGGGCGAACGTCCGTGAGAAAAATTTGAAACGATGGTGAGCTCTCAAAATTTCCCTCTCTAGGGTTTTGGAAGAGGGTTCACCGTTTCGCACTCCCAAATCAAGTTTATGAACTGAACCAGTTTCAAGTAAGTGAAGTGGCTTATCACTCCCACGAAGCAATTGCAGAATCAAAATGGCGTTTTCTCTCTTTTCAACTCCACAACCGCAGCAGCCTCAGCAGTTATTTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCGTTGTTCTCGCAGCAGCAACCCCAGCAATTTCAACTGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAGTTAATGCAGCAACAGCAACAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCAGATCTCCATCCGGATTCGCAGAAAATTCTCCTTCAAATCGAGTATGTGGTCATTTGAAACTTGTGGAACAGTCTTGATTCTAGCTTAATTGTATAGGCAAAGGGTTTAAAAATCTTGGGCAAGAAGTAATATTTGGAGTCATCGATGGTTTTCCGATTATAAATGCTTTTTTCTACTCAAGCAGAATTGTTGGTCGTTTATTTATTACACCTTTGTCGTTTATGTAGTCTCATCGTTTATTGGTTGTAACTAGCTTTTGAACGCTTTATTTTCCACATTATATGGATATTTAGATAGTGCGTCATTACAGGGAACGCATCTTGGAGTATCGTGATGAAAGTCAGAGACTGGATCAATGTAGTCGTCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGTTTGATGCAAGTCGAATTGTTCAGGTTACTTTTGACACTATCAGTTTTCTTTTCCTTATCGAATAACTATTGAAAAGTTGAGCATACTGAAAATATATTTGTGGTTACTGAGACGTTCAAGTGAAAATGGTGGCAGCTTCAGTCTATTTGGCACGTTTCTTGTCAATTAAAAAGTCGTGTGAATAATTGAAAGGGGGTGTAACTTGTTTTGTGTAGTGGTTTGGATATGATATTCAACAACACCCAAAGCTTGCTTTTTATCTTTTTTCTTTAACCTTTGGGACAATTTAGTTCATTTTTTTATTACATTCTTTTATTCATGTGGAAATTGATATGCTACCATCGAGGAAATAGATCGGAAGTAGGATTTCTTAATAAATGTTGAAATTGATCTAGTATTTCACTGGTTGTGAACATTTTCCATTTGGCCCGTACCGTATATTTCTGGTGAATGAATGAGTGATGTGTACTTGGGAGAAAGATGATTGTCCACGCACGACATATTCATTGCCCAATGAATCTTTATTTTACCCACTTATTTTCTACGGACTTGGAAGGAGAAATTAACCAAATGGAGATAAAACATGAGGGATCCCCGTATCCTTCTGTTTTTTGTTGGAAGAGGTGATTGTTTCTTTCGTAGCTGAAGGAAGAAAGGTCTACAGAAAAACTGGTTTAGTATCTACAACATGTATCTTAATGTTCAACCTTTAAAGCATCTCATGTAAATTTATTCTTTGTTCATGTTTATTGATTTAAAATAGTTTAAAATAGTTTGATGCATGTTTATTGATTTTTATATGGTAAATTTATTAATTATGGGTTTATTTGAAAAGTTTAAATATTCCTTGTCAGGAACTTGGGGGAATTAGTGCGTCTACTGAACATCAAAAAGTAATGCTTCAAGAACTGATGGCTGCTGCAAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGTCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCTCCGTCACAGGTTCCTGGAGCAACAACGCCATTAGGATCTAGTGGTCAACCAACATCTACCTCGATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGAAAACCATCTCCCTTTTTGCAGCAAACTGTTTCAAGATTTGAGAAGTATCTTGCTGAATGTCGCCAGTGGATTGAAGACTTAGAGCAGCTCCTTGTTCTAGATTCTAATAGGAGTGCTTCCAATTCTAGTTCCTCACTGTTCCAATCACTACCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTTCCAAGGTAGGAGAAATGTTGTTCTTAGTTGGCATTAATTTGAGAAAATGTTGTGGGAATCTTTGAGATGGACATAGATTCAGTTATTCTCTAAGTAGTTTGATAGATGTGTCAGTGATCTTGATTTATTAAAATGATCTAATAAGTTCGTAATCAAAGTATATGTGTCAGTAAATATAATGTAAACTTGAAGCTGGTTCTTGACATCAAGTTTGACTTGGAAACAGAGTCTAGAATTATTTTAAGTGCTGCTTCTTAAGTTTGGAAAATTTGTCCTCATATTCTTCCAGAACGAGAAATTTCTTCATCTGATCTACATGTGCGTGGTCTTACAGGAGAGAGTAGGATGCTACATCCCTCACATTCTTATAGCTAACATTTTAAAAATTATCCCACAGGTTGAGAGCATTCATCAGTACATTGAATCAATGAAGTCAGCTTATCTTGCCGACCAGCGTCGCAGAGGGGATGGAAACAATCCGTTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGCACATCCAACTTTACATTTGCCCACAAATTCACAACCATCAACTCAAGCTACTGGATTACTTGCCAACTCAGGTAACCACGGTGCATCAACAGTACAACAATCATCTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTATCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTCTTTGGTTCTTCCAGTGTGGCAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCATTGTTTAGTTCTGCTAGTACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTATTTTCGACACCCTTTGCTTCAGGTAGTTTCTTGACATTTTTTTGTTTGAATGTATTTCTTATGATAGTACTTGGCTTATTGCTGATTAGTAATAGTCAATCACTTGTTGTCTAAAGGAAATGATGGTCCATGTGATAGGAATGCCCTTAGATGGTCAGAAATGTTATTATGGTATCAAGGGTACTAATTAGCTCGAAGAGTTTAGTTTTTATTTTTGTTTTCTTTTTCCTCTCCCTCCCTGTTAGGAATTGGTTATATAACTTTTCTTTTCTTTTTGAAATAGTGGGTAGTTGGGCATATAGATAAAATTAAGAAAAAAATTACTATTTTTGTCTTTGGACTTTGTGGCTCTTGATTTAGTTCTTGTATTTCAAATGCCCAAATTTAGTATATGTACTTTCGTTAAATTTTCAAATTAGTTTATACCATTAGTTTATAGTTATTCTCTATTGTTTTTTCCTCTTTACATTTTGGAAAGATATTCAAATATTGGCTTTTTGTATGGAAATTATTAACATCGTTTTAATTACGAAAATTAGGTTTGGACATATTGAATGGAAACTATTTTATCTTAAATTTATGGTGTGTTTGGATTATACTTTCAAGCGTTTAATTTAAAAAATAAGTTATTTTGAAAAAACTAAAGTGTTTTGAAGCCACTCAAAACAAAATTTGAAGTGTATTTTAAAATATTTTTAGGAAAAAGAGTTTAACAAAAATGAGTTTCTTGAAAAACATTTTTTTCTTAATTCAATCCAAACGTACTTAATCTCAATACTTGTGGTTGCTAGGAATAAGTTAAATGATTTGACATGGTTTCAATCTCTGATGAGAAGACATTATTACTACCAAGAACATGACTGATTTGAGTTTTTGATTGACCTGACGTAGAAGGAATATAACTCTTACTGGATGTTAATTGGTACGTTCCTCAGCTATCAGTTACTGATTGGATTTGTTTGTAACAATGACTTGAACTGTTTTTCATAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGGTGAGTTCAATTTTGTTTTGGTTCTTCAGTTTATTAATATATGTTCGGAGCACTATTAGTCTACCATTCTTTCATATTTAACTCAAGGTGTAACTTTCACGGCTTCTCTTTGACACTTCTGCTTATGAATCAAAGATCTGTTGGGGATGGGGATGGGGTTGGTGTTGTTTATATGTAAATATAAAATCTGGTGCTCATACTTGGTATATTTGCTTGTGTCCACACTCTATATAACCGATCTTATTTCACTGCAGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGGCGCTACTAATCACAAGTGACCATGTAAGACTATTACCAGCCACATTTAATAACTGATGAAAAAAGTAGCCAAAGATTATGAGAAACATCAGTACATCTTCGAGGAGAGGCCATCAGATGATTTACTGGCAGTGAAAAGCCTAGAGGTATCGGAATCTTTCTAGTAAGAAAATTGGAAGGCTTTTCTCAAAACGTCCACCATTGCTCGTTGCTTTCTGAAAGAGATCGGAAGGCGACCTGAGAATTTTCTGTAACTCTGTAGAATACAGCATAGATGCGATCAATTCTTATGAAAACTCAAAGAACAAGACTTGTTTTTTCTTGTGATGCAATTGATTCGAGGGATGCTAACGCAATATATCTTCCTAATCTCACGCCATTCTTGGCATTTTTAGTGGCCTGCTGTACAGAATACTTGACTTGCGGTTTCAGGAAACAAGAATATGCCCAAGTGGAATTCTCTTACATTCCAAAGATGGAGTATCTATCGAATATTCTTCTTGGACCGACCTCTGGCTGTGGCTGCTTCACAGCGGCCGTCAGGATTGACAAGTTATACCTCTTAGTTGGTTTATATATCAACGTATCTCTACAGCATGTTTTAACTTTATTTACTTCAATTACTCACATATGCATTACTTGTGTAATTTGTGTACTGAAATTACTAGTAGTGAGTTTTCGACCCTTTTTCACTCTATTTATATTTTCATTTGGTGTCATGTTTCCATTGAAATGCCATTTTGTAATTCATCTGTAAGGTATTTGGGTGATTTTCATCCCTGTGATTTGACCCTGCCACATTTACGGGGATTTCTATTTCTAGTCTTTAATTTTTTCTATGTGATCAGCTTCATCAATT

mRNA sequence

ATGGCGTTTTCTCTCTTTTCAACTCCACAACCGCAGCAGCCTCAGCAGTTATTTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCGTTGTTCTCGCAGCAGCAACCCCAGCAATTTCAACTGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAGTTAATGCAGCAACAGCAACAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCAGATCTCCATCCGGATTCGCAGAAAATTCTCCTTCAAATCGAGGAACGCATCTTGGAGTATCGTGATGAAAGTCAGAGACTGGATCAATGTAGTCGTCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGTTTGATGCAAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTGCGTCTACTGAACATCAAAAAGTAATGCTTCAAGAACTGATGGCTGCTGCAAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGTCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCTCCGTCACAGGTTCCTGGAGCAACAACGCCATTAGGATCTAGTGGTCAACCAACATCTACCTCGATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGAAAACCATCTCCCTTTTTGCAGCAAACTGTTTCAAGATTTGAGAAGTATCTTGCTGAATGTCGCCAGTGGATTGAAGACTTAGAGCAGCTCCTTGTTCTAGATTCTAATAGGAGTGCTTCCAATTCTAGTTCCTCACTGTTCCAATCACTACCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTTCCAAGGTTGAGAGCATTCATCAGTACATTGAATCAATGAAGTCAGCTTATCTTGCCGACCAGCGTCGCAGAGGGGATGGAAACAATCCGTTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGCACATCCAACTTTACATTTGCCCACAAATTCACAACCATCAACTCAAGCTACTGGATTACTTGCCAACTCAGGTAACCACGGTGCATCAACAGTACAACAATCATCTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTATCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTCTTTGGTTCTTCCAGTGTGGCAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCATTGTTTAGTTCTGCTAGTACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTATTTTCGACACCCTTTGCTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGGCGCTACTAA

Coding sequence (CDS)

ATGGCGTTTTCTCTCTTTTCAACTCCACAACCGCAGCAGCCTCAGCAGTTATTTCAATCACAACCGCAACTTTTTCAGCAGAGCAGCCCGTTGTTCTCGCAGCAGCAACCCCAGCAATTTCAACTGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAGTTAATGCAGCAACAGCAACAGCAACAGCAGCAGTTGTTCATTTTTACTAATGATAAGGCTCCTGCAAGTTATGGTACTAAGTGGGCAGATCTCCATCCGGATTCGCAGAAAATTCTCCTTCAAATCGAGGAACGCATCTTGGAGTATCGTGATGAAAGTCAGAGACTGGATCAATGTAGTCGTCTCTACGATTCTTCAGTTTCTAACGATGGATTTGAGTTTGATGCAAGTCGAATTGTTCAGGAACTTGGGGGAATTAGTGCGTCTACTGAACATCAAAAAGTAATGCTTCAAGAACTGATGGCTGCTGCAAAAGAGATGCTTTGGAATACAGAAGTTGCTATTCGCTCTTTCATGATGATACGTCCAAGGTTCCTTCATCAGAGTGCAGGAGGTGCTTCAAATCCCACTGCTCCGTCACAGGTTCCTGGAGCAACAACGCCATTAGGATCTAGTGGTCAACCAACATCTACCTCGATTGCTCCAGTTTTTGATTTCTACAGTGGGCTCCCAAGAAAACCATCTCCCTTTTTGCAGCAAACTGTTTCAAGATTTGAGAAGTATCTTGCTGAATGTCGCCAGTGGATTGAAGACTTAGAGCAGCTCCTTGTTCTAGATTCTAATAGGAGTGCTTCCAATTCTAGTTCCTCACTGTTCCAATCACTACCTAAAATCATGTCAAATGTGCACGAATTCTTTGTTCATGTGGCTTCCAAGGTTGAGAGCATTCATCAGTACATTGAATCAATGAAGTCAGCTTATCTTGCCGACCAGCGTCGCAGAGGGGATGGAAACAATCCGTTTCTTGAGGCTGATCGAAGGGAAACTGCACGCCAAGAAGCGGCAGCTAAGAGGGCACATCCAACTTTACATTTGCCCACAAATTCACAACCATCAACTCAAGCTACTGGATTACTTGCCAACTCAGGTAACCACGGTGCATCAACAGTACAACAATCATCTACAGTAGCTACACCAGCTTCTTCTGGGGGTGGATTATCACTTTTTAGCACTCCCTCTGCTCCATCCACTACAACATCTTCTCTTTTCATGACACCAACAGCATCTGTTCAAACATCCTCTCTCTTTGGTTCTTCCAGTGTGGCAGCTCCCTCAACCCTTTTTGGCTCGTCATCTGCACCATTGTTTAGTTCTGCTAGTACTCCCTTTGGCAGTACTGCTCCATCTTTTGGGCAATCTGCTTCTGCAGGAAGTTCATTATTTTCGACACCCTTTGCTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGGGCAACTTCGAAATCGTCAAAGCCAAAGTCCCGAACTGCACGGCGCTACTAA

Protein sequence

MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSRTARRY*

Homology

[Close]

BLAST of CsaV3_6G042900 vs. NCBI nr
Match: XP_004141933.1 (nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical protein Csa_004153 [Cucumis sativus])

HSP 1 Score: 881.7 bits (2277), Expect = 3.0e-252
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
           QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ
Sbjct: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKSSKPKSRTARRY 505
           TGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 TGSGASFGATSKSSKPKSRTARRY 504

[Close]

BLAST of CsaV3_6G042900 vs. NCBI nr
Match: XP_008440230.1 (PREDICTED: nuclear pore complex protein NUP58 isoform X1 [Cucumis melo])

HSP 1 Score: 836.6 bits (2160), Expect = 1.1e-238
Identity = 482/504 (95.63%), Postives = 485/504 (96.23%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
                QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  -----QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSA GASNPTAPSQV GATTPLG SGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIEDLEQLL+LDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           +KVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP NSQ
Sbjct: 301 AKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQA GLLANSGNHGAST+QQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQAAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSS AAPS LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSAAAPS-LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKSSKPKSRTARRY 505
           TGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 TGSGASFGATSKSSKPKSRTARRY 496

[Close]

BLAST of CsaV3_6G042900 vs. NCBI nr
Match: XP_038882193.1 (nuclear pore complex protein NUP58 [Benincasa hispida])

HSP 1 Score: 827.0 bits (2135), Expect = 8.7e-236
Identity = 475/504 (94.25%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFS QQPQQFQLQQQQQQQQQQQQQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFS-QQPQQFQLQQQQQQQQQQQQQQQQQQ 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
                  QQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  -----LMQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGISASTEHQK+MLQELM AAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKIMLQELMTAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSAGGASNPTAPSQV GAT+PLGSSGQPTSTSI PVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVTGATSPLGSSGQPTSTSITPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIEDLEQLLVLDSNRSASNSS SLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSPSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           +KVESIHQYIESMK+AYLADQRRRGDGNNPFLEADRRETARQEAAAKR HPTLHLP NSQ
Sbjct: 301 AKVESIHQYIESMKTAYLADQRRRGDGNNPFLEADRRETARQEAAAKRVHPTLHLPANSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQA GLL++SGNHGAST QQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQAAGLLSSSGNHGASTAQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLF SS  AAP+TLFGSSSAPLFSSA+TPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFSSSGAAAPTTLFGSSSAPLFSSANTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKSSKPKSRTARRY 505
           TGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 TGSGASFGATSKSSKPKSRTARRY 498

[Close]

BLAST of CsaV3_6G042900 vs. NCBI nr
Match: TYK12916.1 (nuclear pore complex protein NUP58 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 815.8 bits (2106), Expect = 2.0e-232
Identity = 470/493 (95.33%), Postives = 474/493 (96.15%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFSQQQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
                QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  -----QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSAGGASNPTAPSQV GATTPLG SGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           +KVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAA+RAHPTLHLP NSQ
Sbjct: 301 AKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAARRAHPTLHLPANSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQA GLLANSGNHGAST+QQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQAAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSS AAPS LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSAAAPS-LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKS 494
           TGSGASFGATS+S
Sbjct: 481 TGSGASFGATSRS 485

[Close]

BLAST of CsaV3_6G042900 vs. NCBI nr
Match: XP_023518567.1 (nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-222
Identity = 455/508 (89.57%), Postives = 474/508 (93.31%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQ 60
           MAFSLFSTPQ QQPQQLF    QSQPQLFQQSS LFS QQPQQFQLQQQQQQ QQQQQQQ
Sbjct: 1   MAFSLFSTPQSQQPQQLFQSQPQSQPQLFQQSSSLFS-QQPQQFQLQQQQQQLQQQQQQQ 60

Query: 61  QQQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES 120
           QQQQQQQLM QQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES
Sbjct: 61  QQQQQQQLM-QQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES 120

Query: 121 QRLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEV 180
           QRLDQCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKV+LQELM + K MLWNTEV
Sbjct: 121 QRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEV 180

Query: 181 AIRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRK 240
           AIRSFMMIRPRFLHQS GGA+NP AP+QVPG T+PLGSS QPTSTSI PVFDFYSGLP+K
Sbjct: 181 AIRSFMMIRPRFLHQSTGGATNPAAPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKK 240

Query: 241 PSPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFF 300
           PSPFLQQTVSRFEKYL ECRQWIE+LEQLLV +SNRSASNS SSLF SLPKIMSNVHEFF
Sbjct: 241 PSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFF 300

Query: 301 VHVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP 360
           +HVA+KVESIHQYI+SMK+AYLADQRRRGD NNPFLEADRRETARQEA AKRAHPTLHLP
Sbjct: 301 IHVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLP 360

Query: 361 TNSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTP 420
            NSQPSTQATG+LA+SGNHGAST  QSSTVATPASS GGLSLFSTPSAP+T +SSLFMTP
Sbjct: 361 ANSQPSTQATGVLASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSAPATASSSLFMTP 420

Query: 421 TASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFA 480
           TASVQTSSLF SS  AAP++LFGSSSAPLFSSA+TPFGSTAPSFGQSASAG SLFSTPFA
Sbjct: 421 TASVQTSSLFSSSGAAAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASAGGSLFSTPFA 480

Query: 481 SGAATGSGASFGATSKSSKPKSRTARRY 505
           SGAATGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 SGAATGSGASFGATSKSSKPKSRTARRY 506

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy Swiss-Prot
Match: Q8RWH9 (Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.4e-127
Identity = 306/506 (60.47%), Postives = 369/506 (72.92%), Query Frame = 0


Query: 10  QPQQPQQLF-QSQPQLFQQSSPLFSQQQPQQ----FQLQQQQQQQQQQQQQQQQQQQQQL 69
           QPQQ   +F QSQP   QQ++ +FSQ QPQQ    F   QQQQQ    Q QQ QQQQQQL
Sbjct: 25  QPQQTNSIFSQSQP---QQTNSIFSQSQPQQTNSIFSQPQQQQQTSLFQPQQFQQQQQQL 84

Query: 70  MQQQQQQ-QQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCS 129
            QQQQQQ QQQL++FTNDKAPA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCS
Sbjct: 85  NQQQQQQVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCS 144

Query: 130 RLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMM 189
           RLYDSSVS++GFEFDASRIVQELGGI+ + + QK +L ELM  AK+ML N E+A+RSFMM
Sbjct: 145 RLYDSSVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMM 204

Query: 190 IRPRFLHQSAGG--ASNPTAPSQVPGATTPLGSSGQPTS-TSIAPVFDFYSGLPRKPSPF 249
           ++PRF H   GG   S  + PSQ  G      SSGQ  + T+   V DFY G+P+KP+ F
Sbjct: 205 LQPRFPHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAF 264

Query: 250 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 309
           L QTV RFEKYL ECRQW+E+LEQLL LDS++ + +  +SL +SLPK+MSNVH+FFVHVA
Sbjct: 265 LLQTVVRFEKYLNECRQWVEELEQLLALDSDKYSRH--ASLLESLPKVMSNVHDFFVHVA 324

Query: 310 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP---T 369
           +KVESIHQYIESM+++YLADQRRRG+ ++PFLEADRRETA+QEAAAKR HPTLHLP   T
Sbjct: 325 AKVESIHQYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTT 384

Query: 370 NSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT 429
           ++QPSTQ  GL+A+S   G S   Q+S   +  SSG G S  +TP+  S  +SSLF TP+
Sbjct: 385 STQPSTQVAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPS 444

Query: 430 ASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFAS 489
           ++  TSSLFG S     + LFGSS A  F S  + FG T PS    +  G          
Sbjct: 445 STAPTSSLFGPSPTPTQTPLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG---------- 504

Query: 490 GAATGSGASFGATSKSSKPKSRTARR 504
           GA  GSGASFG+ +KSS+PKSRT RR
Sbjct: 505 GATPGSGASFGSMTKSSRPKSRTTRR 513

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL
Match: A0A0A0KI61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.4e-252
Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
           QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ
Sbjct: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKSSKPKSRTARRY 505
           TGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 TGSGASFGATSKSSKPKSRTARRY 504

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL
Match: A0A1S3B190 (nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484746 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 5.3e-239
Identity = 482/504 (95.63%), Postives = 485/504 (96.23%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
                QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  -----QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSA GASNPTAPSQV GATTPLG SGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSARGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIEDLEQLL+LDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLGECRQWIEDLEQLLILDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           +KVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP NSQ
Sbjct: 301 AKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPANSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQA GLLANSGNHGAST+QQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQAAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSS AAPS LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSAAAPS-LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKSSKPKSRTARRY 505
           TGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 TGSGASFGATSKSSKPKSRTARRY 496

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL
Match: A0A5D3CR89 (Nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005110 PE=4 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 9.7e-233
Identity = 470/493 (95.33%), Postives = 474/493 (96.15%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLFQSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLFQ QPQLFQQSSPLFSQQQPQQFQLQQQQQ QQQQQQ  QQ  
Sbjct: 1   MAFSLFSTPQPQQPQQLFQPQPQLFQQSSPLFSQQQPQQFQLQQQQQPQQQQQQLMQQ-- 60

Query: 61  QQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120
                QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD
Sbjct: 61  -----QQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLD 120

Query: 121 QCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180
           QCSRLYDSSVSNDGFE DASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS
Sbjct: 121 QCSRLYDSSVSNDGFELDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRS 180

Query: 181 FMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRKPSPF 240
           FMMIRPRFLHQSAGGASNPTAPSQV GATTPLG SGQPTSTSIAPVFDFYSGLPRKPSPF
Sbjct: 181 FMMIRPRFLHQSAGGASNPTAPSQVSGATTPLGPSGQPTSTSIAPVFDFYSGLPRKPSPF 240

Query: 241 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300
           LQQTVSRFEKYL ECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA
Sbjct: 241 LQQTVSRFEKYLGECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 300

Query: 301 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLPTNSQ 360
           +KVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAA+RAHPTLHLP NSQ
Sbjct: 301 AKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAARRAHPTLHLPANSQ 360

Query: 361 PSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420
           PSTQA GLLANSGNHGAST+QQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV
Sbjct: 361 PSTQAAGLLANSGNHGASTIQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPTASV 420

Query: 421 QTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480
           QTSSLFGSSS AAPS LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA
Sbjct: 421 QTSSLFGSSSAAAPS-LFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFASGAA 480

Query: 481 TGSGASFGATSKS 494
           TGSGASFGATS+S
Sbjct: 481 TGSGASFGATSRS 485

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL
Match: A0A6J1HHG2 (nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC111463519 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 3.5e-222
Identity = 453/508 (89.17%), Postives = 473/508 (93.11%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQQQQQQQQQ 60
           MAFSLFSTPQPQQPQQLF    QSQPQLFQQSS LFS QQPQQFQLQQQQQQQ QQQQQQ
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFS-QQPQQFQLQQQQQQQLQQQQQQ 60

Query: 61  QQQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES 120
           QQQQQQQLM QQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES
Sbjct: 61  QQQQQQQLM-QQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDES 120

Query: 121 QRLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEV 180
           QRLDQCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKV+LQELM + K MLWNTEV
Sbjct: 121 QRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMTSVKGMLWNTEV 180

Query: 181 AIRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPRK 240
           AIRSFMMI PRFLHQS GGA+NP  P+QVPG T+PLGSS QPTSTSI PVFDFYSGLP+K
Sbjct: 181 AIRSFMMICPRFLHQSTGGATNPAVPTQVPGVTSPLGSSVQPTSTSIVPVFDFYSGLPKK 240

Query: 241 PSPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFF 300
           PSPFLQQTVSRFEKYL ECRQWIE+LEQLLV +SNRSASNS SSLF SLPKIMSNVHEFF
Sbjct: 241 PSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEFF 300

Query: 301 VHVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP 360
           +HVA+KVESIHQYI+SMK+AYLADQRRRGD NNPFLEADRRETARQEA AKRAHPTLHLP
Sbjct: 301 IHVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQEAVAKRAHPTLHLP 360

Query: 361 TNSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTP 420
            NSQPSTQATG+LA+SGNHGAST  QSST+ATPASS GGLSLFSTPSAP+T +SSLFMTP
Sbjct: 361 ANSQPSTQATGVLASSGNHGASTAPQSSTLATPASSAGGLSLFSTPSAPATASSSLFMTP 420

Query: 421 TASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFA 480
           TASVQTSSLF SS  AAP++LFGSSSAPLFSSA+TPFGSTAPSFGQSASAG SLFSTPFA
Sbjct: 421 TASVQTSSLFSSSGAAAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASAGGSLFSTPFA 480

Query: 481 SGAATGSGASFGATSKSSKPKSRTARRY 505
           SGAATGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 SGAATGSGASFGATSKSSKPKSRTARRY 506

[Close]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL
Match: A0A6J1KTN6 (nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497125 PE=4 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.9e-220
Identity = 449/509 (88.21%), Postives = 469/509 (92.14%), Query Frame = 0


Query: 1   MAFSLFSTPQPQQPQQLF----QSQPQLFQQSSPLFSQQQPQQFQLQQQQQQ-QQQQQQQ 60
           MAFSLFSTPQPQQPQQLF    QSQPQLFQQSS LFS QQPQ FQLQQQQQQ QQQQQ Q
Sbjct: 1   MAFSLFSTPQPQQPQQLFQSQPQSQPQLFQQSSSLFS-QQPQPFQLQQQQQQLQQQQQHQ 60

Query: 61  QQQQQQQQLMQQQQQQQQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120
           QQQQQQQQ + QQQQQ QQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE
Sbjct: 61  QQQQQQQQQLMQQQQQPQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDE 120

Query: 121 SQRLDQCSRLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTE 180
           SQRLDQCSRLYDSSVSNDGFE DASRIVQELGGIS STEHQKV+LQELM + K MLWNTE
Sbjct: 121 SQRLDQCSRLYDSSVSNDGFELDASRIVQELGGISTSTEHQKVLLQELMISVKGMLWNTE 180

Query: 181 VAIRSFMMIRPRFLHQSAGGASNPTAPSQVPGATTPLGSSGQPTSTSIAPVFDFYSGLPR 240
           VAIRSFMMIRPRF+HQS GGA+NP AP+QVPG T+PLGSSGQPTSTSI PVFDFYSGLP+
Sbjct: 181 VAIRSFMMIRPRFVHQSTGGATNPAAPTQVPGVTSPLGSSGQPTSTSIVPVFDFYSGLPK 240

Query: 241 KPSPFLQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEF 300
           KPSPFLQQTVSRFEKYL ECRQWIE+LEQLLV +SNRSASNS SSLF SLPKIMSNVHEF
Sbjct: 241 KPSPFLQQTVSRFEKYLGECRQWIEELEQLLVQESNRSASNSGSSLFHSLPKIMSNVHEF 300

Query: 301 FVHVASKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHL 360
           F+HVA+KVESIHQYI+SMK+AYLADQRRRGD NNPFLEADRRETARQE  AKRAHPTLHL
Sbjct: 301 FIHVAAKVESIHQYIDSMKAAYLADQRRRGDVNNPFLEADRRETARQETVAKRAHPTLHL 360

Query: 361 PTNSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMT 420
           P NSQPSTQATGLLA+SGNHGAST  QSSTVATPASS GGLSLFSTPS P+T +SSLFMT
Sbjct: 361 PANSQPSTQATGLLASSGNHGASTAPQSSTVATPASSAGGLSLFSTPSGPATASSSLFMT 420

Query: 421 PTASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPF 480
           PTASVQTSSLF SS   AP++LFGSSSAPLFSSA+TPFGSTAPSFGQSAS G SLFSTPF
Sbjct: 421 PTASVQTSSLFSSSGATAPTSLFGSSSAPLFSSANTPFGSTAPSFGQSASTGGSLFSTPF 480

Query: 481 ASGAATGSGASFGATSKSSKPKSRTARRY 505
           ASGAATGSGASFGATSKSSKPKSRTARRY
Sbjct: 481 ASGAATGSGASFGATSKSSKPKSRTARRY 508

[Close]

BLAST of CsaV3_6G042900 vs. TAIR 10
Match: AT4G37130.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-128
Identity = 306/506 (60.47%), Postives = 369/506 (72.92%), Query Frame = 0


Query: 10  QPQQPQQLF-QSQPQLFQQSSPLFSQQQPQQ----FQLQQQQQQQQQQQQQQQQQQQQQL 69
           QPQQ   +F QSQP   QQ++ +FSQ QPQQ    F   QQQQQ    Q QQ QQQQQQL
Sbjct: 25  QPQQTNSIFSQSQP---QQTNSIFSQSQPQQTNSIFSQPQQQQQTSLFQPQQFQQQQQQL 84

Query: 70  MQQQQQQ-QQQLFIFTNDKAPASYGTKWADLHPDSQKILLQIEERILEYRDESQRLDQCS 129
            QQQQQQ QQQL++FTNDKAPA+Y TKWADLHPDSQK+LLQIEE+ILE+R ESQRLDQCS
Sbjct: 85  NQQQQQQVQQQLYLFTNDKAPANYSTKWADLHPDSQKLLLQIEEKILEHRSESQRLDQCS 144

Query: 130 RLYDSSVSNDGFEFDASRIVQELGGISASTEHQKVMLQELMAAAKEMLWNTEVAIRSFMM 189
           RLYDSSVS++GFEFDASRIVQELGGI+ + + QK +L ELM  AK+ML N E+A+RSFMM
Sbjct: 145 RLYDSSVSSEGFEFDASRIVQELGGINTAMDRQKAVLHELMIVAKDMLRNAEIAVRSFMM 204

Query: 190 IRPRFLHQSAGG--ASNPTAPSQVPGATTPLGSSGQPTS-TSIAPVFDFYSGLPRKPSPF 249
           ++PRF H   GG   S  + PSQ  G      SSGQ  + T+   V DFY G+P+KP+ F
Sbjct: 205 LQPRFPHWKQGGGVVSVGSQPSQGQGTNPAPASSGQQQAVTTTVQVSDFYRGIPKKPTAF 264

Query: 250 LQQTVSRFEKYLAECRQWIEDLEQLLVLDSNRSASNSSSSLFQSLPKIMSNVHEFFVHVA 309
           L QTV RFEKYL ECRQW+E+LEQLL LDS++ + +  +SL +SLPK+MSNVH+FFVHVA
Sbjct: 265 LLQTVVRFEKYLNECRQWVEELEQLLALDSDKYSRH--ASLLESLPKVMSNVHDFFVHVA 324

Query: 310 SKVESIHQYIESMKSAYLADQRRRGDGNNPFLEADRRETARQEAAAKRAHPTLHLP---T 369
           +KVESIHQYIESM+++YLADQRRRG+ ++PFLEADRRETA+QEAAAKR HPTLHLP   T
Sbjct: 325 AKVESIHQYIESMRTSYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPASTT 384

Query: 370 NSQPSTQATGLLANSGNHGASTVQQSSTVATPASSGGGLSLFSTPSAPSTTTSSLFMTPT 429
           ++QPSTQ  GL+A+S   G S   Q+S   +  SSG G S  +TP+  S  +SSLF TP+
Sbjct: 385 STQPSTQVAGLIASSATPGGSNPPQTSVPTSNPSSGAGFSFLNTPA--SGPSSSLFATPS 444

Query: 430 ASVQTSSLFGSSSVAAPSTLFGSSSAPLFSSASTPFGSTAPSFGQSASAGSSLFSTPFAS 489
           ++  TSSLFG S     + LFGSS A  F S  + FG T PS    +  G          
Sbjct: 445 STAPTSSLFGPSPTPTQTPLFGSSPASTFGSTQSLFGQTTPSLTMPSQFG---------- 504

Query: 490 GAATGSGASFGATSKSSKPKSRTARR 504
           GA  GSGASFG+ +KSS+PKSRT RR
Sbjct: 505 GATPGSGASFGSMTKSSRPKSRTTRR 513

The following BLAST results are available for this feature:

BLAST of CsaV3_6G042900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141933.1	3.0e-252	100.00	nuclear pore complex protein NUP58 [Cucumis sativus] >KGN48489.1 hypothetical pr...	[more]
XP_008440230.1	1.1e-238	95.63	PREDICTED: nuclear pore complex protein NUP58 isoform X1 [Cucumis melo]	[more]
XP_038882193.1	8.7e-236	94.25	nuclear pore complex protein NUP58 [Benincasa hispida]	[more]
TYK12916.1	2.0e-232	95.33	nuclear pore complex protein NUP58 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_023518567.1	1.1e-222	89.57	nuclear pore complex protein NUP58-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G042900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWH9	2.4e-127	60.47	Nuclear pore complex protein NUP58 OS=Arabidopsis thaliana OX=3702 GN=NUP58 PE=1...	[more]

BLAST of CsaV3_6G042900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI61	1.4e-252	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490040 PE=4 SV=1	[more]
A0A1S3B190	5.3e-239	95.63	nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5D3CR89	9.7e-233	95.33	Nuclear pore complex protein NUP58 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1HHG2	3.5e-222	89.17	nuclear pore complex protein NUP58-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KTN6	1.9e-220	88.21	nuclear pore complex protein NUP58-like OS=Cucurbita maxima OX=3661 GN=LOC111497...	[more]

BLAST of CsaV3_6G042900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37130.1	1.7e-128	60.47	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..74
None	No IPR available	PFAM	PF15967	Nucleoporin_FG2	coord: 237..494 e-value: 3.3E-10 score: 39.1
None	No IPR available	GENE3D	6.10.140.1350		coord: 236..326 e-value: 2.7E-26 score: 93.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..504
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 477..495
None	No IPR available	PANTHER	PTHR13437:SF2	NUCLEOPORIN P58/P45	coord: 6..498
IPR024882	Nucleoporin p58/p45	PANTHER	PTHR13437	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	coord: 6..498

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G042900.1	CsaV3_6G042900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0017056	structural constituent of nuclear pore