CsaV3_6G042630 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G042630
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transmembrane protein 220
Location	chr6: 25030153 .. 25032542 (+)
RNA-Seq Expression	CsaV3_6G042630
Synteny	CsaV3_6G042630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTGAAGCCCTTTTCAAGTTTTTAAGATCTGCATCAAATTTTCATTACACTTTGATTAACAAAACCTTAGAGATGATTAGTTATCATCTTTCCACCAAACCCATGTGAGCAATATTAATTTTCAACTGACAAAAGAAACTTTAAGCTACAACTAACACTTATGGTTTACTTAACCATATTTAGACCAATTTCAAAAGGGCAAGGCGTTGACTAAAAAGGGTTTTTGCTGTTCGATCGTATAAGCTTTGGAAAAAGAAGAGAAAATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGGTATTCCAAACCCTTCTCTTCTTTTCTTTCAATTAACAAACTTGTGAATCGAAGATCCGAACTTTTCAAAATCTCAGGCTGCTTTCTGTTGGTGATGATCTGACAACAGAAAATTTGATGAAGTTGAAATTGTGTGTTTGAATAATGTAATTTAGAAAACAAAAGCTTATTGGAGGGGTTAAACAATGCAGCAGCTACTTTTATACTGTTTAATAAAAGAATTTATGAAATGTATTTCGAACTCAAAAACATCACATGTGGATTAGTGGATTTTTCCTGTTACATGTGCAACCGTTTTCACAGTAAGAGACTATGATCCAACTACTCGCTACAGCTTTCAATTAGAGTAAGTATTTAGGCATCATGATACAATCATATCACAACTTAACAGAAGTGTATCAGAGGAGTATATACTTTTAGACTTCTACCGTTTATGTTAGTATATTTATGATAATACTATAATTGTTAAGGCATTTCCAAGACATGTTCCCTGATACCGCTATATAATTACAATCTATCTTTTATTTAATGGATACGGAGCACCAATGCTTTAGGAATACGTATATTTCAAACGTGTGTCTGACCCGTTATTCTAAATTACTGAAGAAATGTACATCTTGTAAAAGCCATTCAATTACTTTTCCTAATTCTGATATTGACTTGAGCAGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGTAAGGCTATAAGCTCATTCTTCTCTCTTTGGTTACAAATGGAAATTAGAGAGGCTAAAATTAAACCAACATCAAGGTACGGGAAACAAAAATCGAATTTGAAAAAACTATTTTAATCTTTGGTATAAGTTATGATTAATTAGGTATCGATATACTGTTTTATAAGCCTAAAGAATATTTTCAATTGATTGCAGGAATAGCATGTTTGGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGGTGAAAAAGGGCAAAATGAAATTCTGAAACATGTTGCACAAATCTCACTCTACAAACTTCAAAGGAATGGAAAGAGTTCTTGAGTTCAACATTGGTCGATTTAGTTCATGTATTTTTCCAATTTATAATGCAAACTCTCCATAAAATTGATCTGTTCTGATATAACAATTGAATGATCTGCCACAATTGTAAACTATGATACACTTTCAAAACAACCCATCACAACAACCAAATGAAAAAAGAAAAGAAAAGAAAAGGGGAACATATTTATTCCTAAAACTTCCTTGAAACTTTGGAAAAAAGCATATACAATTTGCTAAACTAAGTTGGTCCAGTAGTAAAAGTAAGATAAATCCATAGCTACAAACTAGAGAAGGTTAGAGGGCATTGACATCTTTTCAACCGGAAACAAATTCCTACGTACAGAAAATTTGTTTTGCCATTTTCCTCCGACCTCCAGGGTGAGGGAGTTGTTTGGCTAGACGAGGGAATAAACCTTAAAACAGTGCAGGATGTGTGCTCTCAGAACCTCTCCTGCTCGTTGTTCCAAAATTTAAGGCTCCAGGTCTTTTTCCCTCGAATGATAGGTTGAACATGTTCATCAAATATGACCTCAGCAACTTGAAGATTCACAGCCACTTCCTACGGGCAGTAGCTCACGTCGGTAATTGAATGTCAACTCTTCACCTGTAGCTATCTGCAGGAATACATGTACAGGAGTCTTAATATGAGATTGTGATTGCTTGTACAGAATGTTTCTTGGTTATATAAAAAGAAGTCGAAA

mRNA sequence

ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGAATAGCATGTTTGGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGGTGAAAAAGGGCAAAATGAAATTCTGA

Coding sequence (CDS)

ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTGTGTTAATGGGGTTTTTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGCTGTGCTTGTGCTGTGAATCTTCTCAAATGGAACGTCTCTTTAGAAGCCATGAATAATGTTGCCAAGGCAGCAATGGGAGTTGGAATATGTTTGTGGGTGAAGGTTGTAGCAGAGGATTATATGAATGGAATTGCAGGTTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTGTGTGTTCCATGATTTTGCATCTGATAGCTGCATCTTCATCATCCCCAAAACTTCGTAGAACAAGTAAAAGTAAAAGTAAAAGGGTGTTTCCAAGACATCTCACATATGGAATAGCATGTTTGGTGGCATTTAGTTATGGACTTCCCATTTTCTTCTTCTTGGTGAAAAAGGGCAAAATGAAATTCTGA

Protein sequence

MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSSSPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF*

Homology

[Close]

BLAST of CsaV3_6G042630 vs. NCBI nr
Match: XP_004141949.1 (transmembrane protein 220 isoform X2 [Cucumis sativus] >KGN48459.1 hypothetical protein Csa_003964 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 2.4e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 168

[Close]

BLAST of CsaV3_6G042630 vs. NCBI nr
Match: XP_008440175.1 (PREDICTED: transmembrane protein 220 [Cucumis melo] >TYK12942.1 transmembrane protein 220 [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 3.6e-85
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MAIPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           SPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF
Sbjct: 121 SPKLRIT--SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 166

[Close]

BLAST of CsaV3_6G042630 vs. NCBI nr
Match: XP_031742851.1 (transmembrane protein 220 isoform X1 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 147/154 (95.45%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGL 155
           SPKLRRTSKSKSKRVFPRHLTYG A    FS  L
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYGKAISSFFSLWL 154

[Close]

BLAST of CsaV3_6G042630 vs. NCBI nr
Match: XP_038881310.1 (transmembrane protein 220 isoform X2 [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 147/169 (86.98%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKW VS+EAM +V
Sbjct: 1   MATPSKLYSGCSLLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWYVSIEAMKHV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA MG GICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKATMGFGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSK-SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           S    R  + SKSKR FPR+LTYG+A LVAFSYGLPI FFLV+KGKMKF
Sbjct: 121 SSSSTRIHRTSKSKREFPRYLTYGMAWLVAFSYGLPI-FFLVQKGKMKF 168

[Close]

BLAST of CsaV3_6G042630 vs. NCBI nr
Match: XP_022962868.1 (uncharacterized protein LOC111463236 [Cucurbita moschata] >KAG7027090.1 hypothetical protein SDJN02_11100 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.5 bits (667), Expect = 4.9e-66
Identity = 128/168 (76.19%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYI 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           S + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Sbjct: 121 SIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF 163

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BLAST of CsaV3_6G042630 vs. ExPASy Swiss-Prot
Match: Q8BP07 (Transmembrane protein 220 OS=Mus musculus OX=10090 GN=Tmem220 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 36/122 (29.51%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 7   LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMG 66
           L+ +C+ LM   FA +  VQ NDPD  LWV +Y     + LL     L   N + K+   
Sbjct: 12  LWRACNALMAAFFALAAVVQVNDPDAELWVVVYMIPAVLTLLVGFNPLVTGNFIWKSVSA 71

Query: 67  VGI---CLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---SGLVVCSMILHLIAASSS 123
           + +    LW          G+A    L   + ++ E+ G   SGLV+ +  + L  +SS 
Sbjct: 72  IHMLFCALWA--------GGLAYHFLLHAKQNLLNEEEGRELSGLVIVTAWMALCHSSSK 125

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy Swiss-Prot
Match: Q6QAJ8 (Transmembrane protein 220 OS=Homo sapiens OX=9606 GN=TMEM220 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.2e-04
Identity = 36/119 (30.25%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 7   LYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNVAKAAMG 66
           L+ +C+ LM   FA +  VQ NDPD  +WV +Y     + LL   ++ E   NV   ++ 
Sbjct: 5   LWRACNGLMAAFFALAALVQVNDPDAEVWVVVYTIPAVLTLLV-GLNPEVTGNVIWKSIS 64

Query: 67  VGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTG---SGLVVCSMILHLIAASSSSP 123
               L+  V A     G+A +L     + ++ E+ G   SGLV+ +  + L  +SS +P
Sbjct: 65  AIHILFCTVWAV----GLASYLLHRTQQNILHEEEGRELSGLVIITAWIILCHSSSKNP 118

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL
Match: A0A0A0KI28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487800 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF
Sbjct: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 168

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL
Match: A0A5D3CNK6 (Transmembrane protein 220 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005370 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MAIPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           SPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF
Sbjct: 121 SPKLRIT--SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 166

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL
Match: A0A1S3B186 (transmembrane protein 220 OS=Cucumis melo OX=3656 GN=LOC103484718 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA PSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV
Sbjct: 1   MAIPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS
Sbjct: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           SPKLR T  SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF
Sbjct: 121 SPKLRIT--SKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 166

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL
Match: A0A6J1HG20 (uncharacterized protein LOC111463236 OS=Cucurbita moschata OX=3662 GN=LOC111463236 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66
Identity = 128/168 (76.19%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSL+ +  +
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLQGVAYI 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED++NGIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVNGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           S + R     K +RVF R+++YG+A LVAFSYGLPIFFFL++ GKM F
Sbjct: 121 SIRTR-----KGERVFSRYVSYGMASLVAFSYGLPIFFFLIQMGKMNF 163

[Close]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL
Match: A0A6J1KP55 (uncharacterized protein LOC111497019 OS=Cucurbita maxima OX=3661 GN=LOC111497019 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.0e-66
Identity = 129/168 (76.79%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MATPSKLYS CS+LM FLFAYSTAVQFNDPDWYLW+PLYGCACAVNLL W+VSLE +  V
Sbjct: 1   MATPSKLYSCCSLLMAFLFAYSTAVQFNDPDWYLWIPLYGCACAVNLLNWDVSLEGVAYV 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
           AKA +G+GICLWVKVVAED+++GIAGFLSLDLSERVVREKTGSGLVV SM+LHLIA SSS
Sbjct: 61  AKATLGLGICLWVKVVAEDFVHGIAGFLSLDLSERVVREKTGSGLVVSSMVLHLIAESSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMKF 169
           S + R     K +RVF R++++G+A LVAFSYGLPIFFFLV+ GKM F
Sbjct: 121 SIRTR-----KGERVFSRYVSHGMASLVAFSYGLPIFFFLVQMGKMNF 163

[Close]

BLAST of CsaV3_6G042630 vs. TAIR 10
Match: AT2G23755.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 8.7e-37
Identity = 79/167 (47.31%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 1   MATPSKLYSSCSVLMGFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLLKWNVSLEAMNNV 60
           MA P  L+  CS+LM FLFAYS +VQ NDPDWY W PLY  AC VNL+ +   ++ M  +
Sbjct: 1   MAKPRNLFRVCSLLMAFLFAYSASVQLNDPDWYFWFPLYTLACVVNLINYRRRIKLM--M 60

Query: 61  AKAAMGVGICLWVKVVAEDYMNGIAGFLSLDLSERVVREKTGSGLVVCSMILHLIAASSS 120
            + A+ +G+ L VKV+AED +    G LSLDL+ RVVREK GSGLV+ SM+L L A+SSS
Sbjct: 61  MRTALSLGVFLLVKVIAEDVITEKVGVLSLDLTHRVVREKIGSGLVIASMVLQLQASSSS 120

Query: 121 SPKLRRTSKSKSKRVFPRHLTYGIACLVAFSYGLPIFFFLVKKGKMK 168
           S                + + +G+   V F YGLP +FF ++KG++K
Sbjct: 121 S----------------KTIDFGMVATVIFGYGLPFWFFTIEKGEIK 149

The following BLAST results are available for this feature:

BLAST of CsaV3_6G042630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141949.1	2.4e-89	100.00	transmembrane protein 220 isoform X2 [Cucumis sativus] >KGN48459.1 hypothetical ...	[more]
XP_008440175.1	3.6e-85	97.62	PREDICTED: transmembrane protein 220 [Cucumis melo] >TYK12942.1 transmembrane pr...	[more]
XP_031742851.1	4.4e-75	95.45	transmembrane protein 220 isoform X1 [Cucumis sativus]	[more]
XP_038881310.1	1.1e-73	86.98	transmembrane protein 220 isoform X2 [Benincasa hispida]	[more]
XP_022962868.1	4.9e-66	76.19	uncharacterized protein LOC111463236 [Cucurbita moschata] >KAG7027090.1 hypothet...	[more]

BLAST of CsaV3_6G042630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BP07	3.2e-04	29.51	Transmembrane protein 220 OS=Mus musculus OX=10090 GN=Tmem220 PE=2 SV=1	[more]
Q6QAJ8	7.2e-04	30.25	Transmembrane protein 220 OS=Homo sapiens OX=9606 GN=TMEM220 PE=1 SV=1	[more]

BLAST of CsaV3_6G042630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI28	1.2e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487800 PE=4 SV=1	[more]
A0A5D3CNK6	1.7e-85	97.62	Transmembrane protein 220 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B186	1.7e-85	97.62	transmembrane protein 220 OS=Cucumis melo OX=3656 GN=LOC103484718 PE=4 SV=1	[more]
A0A6J1HG20	2.4e-66	76.19	uncharacterized protein LOC111463236 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1KP55	9.0e-66	76.79	uncharacterized protein LOC111497019 OS=Cucurbita maxima OX=3661 GN=LOC111497019...	[more]

BLAST of CsaV3_6G042630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23755.1	8.7e-37	47.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029377	TMEM220 protein	PFAM	PF15071	TMEM220	coord: 18..113 e-value: 1.1E-14 score: 55.0
None	No IPR available	PANTHER	PTHR34262	TRANSMEMBRANE PROTEIN 220	coord: 3..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G042630.1	CsaV3_6G042630.1	mRNA