CsaV3_6G040990 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G040990
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	COPII coat assembly protein SEC16, putative
Location	chr6: 23775309 .. 23775785 (-)
RNA-Seq Expression	CsaV3_6G040990
Synteny	CsaV3_6G040990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

mRNA sequence

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

Coding sequence (CDS)

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

Protein sequence

MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF*

Homology

[Close]

BLAST of CsaV3_6G040990 vs. NCBI nr
Match: XP_011657724.1 (early nodulin-20 [Cucumis sativus] >KGN48294.1 hypothetical protein Csa_003692 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 159
           HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Sbjct: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 158

[Close]

BLAST of CsaV3_6G040990 vs. NCBI nr
Match: XP_008462609.1 (PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 5.6e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CsaV3_6G040990 vs. NCBI nr
Match: TYK07441.1 (putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CsaV3_6G040990 vs. NCBI nr
Match: XP_038883302.1 (uncharacterized protein LOC120074291 [Benincasa hispida])

HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS---LRRTTFLPSSPMPPPN---PAVSPPPPPSPINLALLSFKSS 60
           MAKS+AQ+TYPPPSPS   LR   F+PSSPMPPPN     VSPPPPPSPINL LLSFKSS
Sbjct: 1   MAKSAAQITYPPPSPSLSNLRHRAFIPSSPMPPPNGTVSGVSPPPPPSPINLRLLSFKSS 60

Query: 61  SQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYS 120
           SQSYTSLKDILPSAS   AAVNSPTAASPANS YEISIRNRLVKQAAWAYLQPMSASSYS
Sbjct: 61  SQSYTSLKDILPSAS---AAVNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYS 120

Query: 121 AGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           AGPNFFHRF LRFST NPIY C GFIR +I+PAIIR FRFCIC
Sbjct: 121 AGPNFFHRFWLRFSTANPIYGCLGFIRGTIIPAIIRVFRFCIC 160

[Close]

BLAST of CsaV3_6G040990 vs. NCBI nr
Match: XP_022979075.1 (uncharacterized protein LOC111478820 [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60

Query: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 158

[Close]

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL
Match: A0A0A0KHJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 159
           HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Sbjct: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 158

[Close]

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL
Match: A0A5A7SL81 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00720 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL
Match: A0A1S3CHC6 (uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL
Match: A0A5D3C6C7 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001710 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71
Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL
Match: A0A6J1IS66 (uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.0e-52
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60

Query: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 158

[Close]

BLAST of CsaV3_6G040990 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.0e-08
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 13  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS-- 72
           P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S  
Sbjct: 9   PATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDIISSPI 68

Query: 73  -ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQP--MSASSYSAGPNFFHRFC 132
            +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQP  +++S  SAG  FF R  
Sbjct: 69  NSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFFRRVW 128

Query: 133 LRFSTGNPIYSCFGFIRSSIVPAIIRAFR 154
           L  S G      F F+R  +   I ++FR
Sbjct: 129 LHLSAG------FQFLR-RVFDWIFQSFR 150

[Close]

BLAST of CsaV3_6G040990 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.0e-08
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 13  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS-- 72
           P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S  
Sbjct: 9   PATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDIISSPI 68

Query: 73  -ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQP--MSASSYSAGPNFFHRFC 132
            +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQP  +++S  SAG  FF R  
Sbjct: 69  NSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFFRRVW 128

Query: 133 LRFSTGNPIYSCFGFIRSSIVPAIIRAFR 154
           L  S G      F F+R  +   I ++FR
Sbjct: 129 LHLSAG------FQFLR-RVFDWIFQSFR 150

[Close]

BLAST of CsaV3_6G040990 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 44  INLALLSFKSSSQS----YTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQ 103
           ++L L+S   SS+     YTSLKDILPS+S +  +     A + A S   I+IRNRLVKQ
Sbjct: 23  LDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQ 82

Query: 104 AAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAF 153
           AA +YLQP S  + S+ P+F  R          + S F  + S+   A++R F
Sbjct: 83  AACSYLQP-STPTPSSNPSFLRR----------VSSSFIRLVSAFFDALLRIF 124

The following BLAST results are available for this feature:

BLAST of CsaV3_6G040990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657724.1	1.5e-77	100.00	early nodulin-20 [Cucumis sativus] >KGN48294.1 hypothetical protein Csa_003692 [...	[more]
XP_008462609.1	5.6e-72	95.54	PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 put...	[more]
TYK07441.1	2.1e-71	94.90	putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa]	[more]
XP_038883302.1	7.6e-61	83.44	uncharacterized protein LOC120074291 [Benincasa hispida]	[more]
XP_022979075.1	1.4e-51	77.16	uncharacterized protein LOC111478820 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G040990 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G040990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHJ9	7.4e-78	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1	[more]
A0A5A7SL81	2.7e-72	95.54	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CHC6	2.7e-72	95.54	uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=...	[more]
A0A5D3C6C7	1.0e-71	94.90	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1IS66	7.0e-52	77.16	uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820...	[more]

BLAST of CsaV3_6G040990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	8.0e-08	38.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	8.0e-08	38.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	1.4e-07	39.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..41
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 10..154
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 10..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G040990.1	CsaV3_6G040990.1	mRNA