
CsaV3_6G040750 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTAAATCAATATTTTATGGATATTTGGGTCGAAATTCTTTTGGTAAAATGATCTCACAAAACTTTCCTTCTATGGTAATCCCAATCCTCTCAATCTTCTTCTTCAGCAAAGATTAAAAAATGGGAAGTGGGAACTGTTAGTGTTTGGTAGGCACAAGAATGGCAAACGATTCTCAAAACTAAATCCTCCCAATCGCATTAGCCCTATCCCCTTCTTAATTCTTTCATGTTCTTCCAATTCTCCCTCGAAATTCCCTTTCTTCTCTCTTAATATCTCTCTTTTGCTGTTTTCGATGTCTCTACCTTCTATCTTCGCTCCTTCCTCTCATTTTCCCCTCCCAATTTCACATTTCAAGCCCTCTCGCCATTGCAGAGCTTCAATTTTCTTGTCCATCGATTATAGATGCTGCAAGTCCATCTATGCATCCTCTAGAAGTATTTCCATACGATCGCCGCGCATCTGCGCTTCTTCGTCCGATGGCGCGTCGGCTTCAGTTCCCTCTGATAGTGATAACACTTCCAGGTTAGTTTTTCGGGTTTAGTAGTTGTTGAGGAGTTGAAGTTTGGTGGCGACTCTGAAATGTGTAATTGGTTGTGAATTTGCTGAGAGTTGAAAAGAAAATTTTACGAAGAAGCTACTGGTTTACTTGTGGCGTTCGTTTGATTTATTTTATGGTATCTGTGTAGATGGAATTCATGTGTGTGTGTTGGAATTTATTGATTTTATTTTTCTGTTGCTGCTTTTCAGTAACTTTTGTATTATAGAAGGACCGGAGACCGTTCAGGATTTTGTTCAGATGCAATTCCAGGAAATTCAAGACAACATAAGGAGTCGTCGTAATAAAATTTTTCTTCTAATGGAAGAGGTTAGGTTTCTAAATGGAAGTGGATCCTTCAGTTTTTTCTCCCTTGAAATTTGTGCGTAAAGCTATCACCTAATGGATAGAATTATCAGTTTTAAATTTTTATTTGTGAACGGTGGTTAGGTTAGAAGATTACGAATTCAACAACGTTTGAAGAATCTAAAACCTATCGATGAGAATGACATTGAAGAGGCGAATGAGATGCCTGACATTCCATCATCTATTCCTTTTCTTCCCCACGTGGTAAGTGGCAAATTTATCTATCGTATAAGCACAACATATTGGCTTATTTTCTTTTTCTTTTTTGAGTTCAAAAAAATGTGAGGTTTGAGAGATTCAAATCCCTGACCTCGTAGGTCAAGGGTTGAGTCATGGCTAGCAGCACAACGTTCATTAGGAAACACTGTATGCTGTTTTTTCTACCAGCGTCAGGAAGCTCAATATCATTACTACATTGAGAACTTGATATAAACATTCTCATCCTACAGCAGATGGCTTCACTAATAAAAATGCTAGGCTAGTGCCTGACTGTTACTTAAAACCATCAGAAATCATTTAGATGATTGCAGTCATAGTTTGGAAGGAAAAACTGAAACCCATTTTTATATTCCCATATGAGCTTAAAATTGTGTTTATTATCCAGTTGTTCACTTTCTTTAATGATGGGTAAACTGTATCTGAACTTTTTACACCTGTTCAGTTACAGCCAAGTCCGAAAAAGGTCTTATATAATGCACCGTATTTCTTGTTTCTCTCTTTTGTGTTTAGTTACTCGGGGTCACTTATTGGTGGGTTTTATCTATTCATATTTGACTAAAGTGATTTTTTCCCTTCTTCCTTTGCAGACACCTAAGACATTGAAGCAGCAATATTTAACCAGCTTGTCAGTTATATGGGGAATAATTGTATTTGGTGGCCTTATTGCCCCAACTGTAAGTTGATTTCTTACATCCTCTTCTTTTGGCTCTTGTTCTTCGCCCTTGCGGATTGTTCTAGACTTGTTGATGGTGTATTGCCCTTGTATGTGGGTTGCTGTTTCTTATTTTGCTTCTCCACTCCACCCCAAAAAGTTAATGAAGAGCGGAAACTTAATAACAGAAACAAAAATGTTTTTCTTGAATTTAAAAAGCAGCATGATTTATTAACTGCGATTATTAGTTTTATGGATGCTTTTGGTATTCTTATGAGAATAGTAGTTTCTTGAGCTTTATATCAAAACTCTACCAGAAAATATTTTCCTCATTGGATGCAATCTTTGAGCTTGAGAATAATAGAGATATTTTATTTGTGTCATAAAACATATACTTAGATGACGATGGCTCCTTTTTAAGATTCGTGAGAATATGAATCATAATAGAACATGATTTTGATCAAGTATAAGGTATCTTAATATCTTATATTAGGAACTCTTCATATATGGGACTTGAGAGTGAATATTTATCAGATTTTATATGCTTTACCATGTGAGCTATAAGTTGGATCGAATATATTTAATATTTACCGATTACTGCTTCTGACTGCTTCGGAGAATAAGGAAGGATATGGATTCTGAATGATGGTGATGAAATTCCTTTTTTTCAATTAAGCATAACTTACTTATTGAAGTCTTGATGATCATGCTCAATAAATTTCTACATTTCATATTGGTTATCTATTTATGGCTCCGAGCCTCCGACCATCTAAATGTTGGTGAAAAAATCCTTCCCATGGCAGCTGGAGCTAAAATTGGGATTAGGTGGCACTTCGTACGAAGATTTCATCCGCAACATGCATTTGCCTATGCAATTAAGGTATTTCATGAAACCCAACTTCTTTCCAAATTTGAATTCTGTTGCTAATTCAACGTTTGTCTCTCGTGTTTGCTTCAATTTCTCTCTTTTTGAATCTCAAATACAGTCAAGTGGATCCCATAGTGGCGTCATTTTCAGGTGGAGCGGTAGGTGTCATCTCGGCCTTGATGTTAATTGAAGCCAACAATGTTGAGCAACAAGAGAAAAAAAGGTGTAAATATTGTCATGGAACTGGTACGTGCTAATTTAAAGTGATTCTATATATATTAGCTTTGCTGCCCAATTCATAGTTTAGTTTTGAACTTTTGAAATTGAATGTTTGTCATTCTCATGTGGTATGATAAAATCACATTCTCAATTCAATTTAAAGATCTTATATCCAAGTTTATATTTATGTTCGTCCCAGTTTAAAGTTCGGTTAAAATATCATTTTGGTTGTTCAATTTTAATCCCTATTCTTTCATAAATATTTAAATTTAGTTCACAACACGAGTTTTTTTCTTTTAAAGATTTTTGTAACGTATAACATATGTTTAAAATATATTCACATACTATATTTCGATGCATTAAAATTTCTATTAGTTATTATTTATTAAATTTGGCTAAAATTTAACTTTGAGGGACTAAATTTAAGATTCATGGAACGTACCAGAGTTGAAATTGGACAAGTGAAATTATGGGGATTAAAATTGAACAACCTTCAAAGTTTTAACCATAATATTTTAGTTTAATTAGTTTAATTTTTAACTTTGTGGTTCATGTCTACTTGATCTCTAGCTTTCAAAAATGCCTAATAGGTTTTTGAGCCTGCATTTGCAATTTTGTGTCTAATTAATCATTGAACTTTTAAAATATCTAATAGGCTCTTCAACTTTCACTATTGTGTTTACTAGGTTATCAACACATTCAATTTTTTTATAAAAAAATTAGTCTATCAGATATAGATTTAAATTTTATGTTTAATCAGACCCACATCTAATTTTATCTTGGAGATATGTGAATTCTAAAAAATATTGAATTTGTCAACAAGCTTGATAAACAAACTTAAAAGATCAATGATCTATTAGATGGTGAAAGTTTGAGGTTTGAGGATATATTAGACCTTTTTTAAAGTTTGGAAATCAAATAGGCAAAGTTAATTTTGTATGTTAACCAATTTCATATTGTTTTCCTTCAGCTTAAAAGTTTCTAACCATCCCTTCATAATCTTATTTATTATGGACAGGGTATTTGGCTTGTGCTCGATGTTCTTCCAGTGGCGTCTGCTTAAGTGCTGACCCCATCTCACTATCTGCTTCTTCTAGCCGCCCTTTACGAATGCCCAAAACCCAAAGATGTCTCAATTGTTCCGGTGCAGGAAAGGTACAAAGTTTTAATCATAATTATTCTTTATTAATTTAAGAGTAGTTGAAAATACCTATTTCGCTTTTGAAAACAACTTGTTTGGCAGTATACTTTTTAAAAACTTTTGGCTAATGTCTTACATATTTCTTCTTTCTTCTTTCTTCTTTTTTTTTTTCCTTTTTAAATCTAATCTTTATATATGATCATTAATGAACGTTATTTTTTTTGTACAACTTGATATAAATCTACTACATATTTTAATTACTATGGAGAAGAAATCAATGAACACAATAGAAATAACTAGAAGGCGGCTTTCTTGATGACGACAAGTTTGTGGCCTAAATCATCAGAGAGGTTTTCTTTACTCTTACTAACCGTCAACATAACCATTTGGCTCATAGAAGCTCACAAAACTATAGACGAGCAAAGATCCATCACACCCTCATATCTCTCACCTTCAGTGGTTTCTTGTTTTGGTGTCGAAAAATTTGATTTTGTAGTGTTGGGTTACCTGTTAGTTTGCTTCTAAAGAAAAGCTGTTTCAAAAGGCTAACATAATGTGTTGTCTCATGATAATTGTTTGATATGGATTAAAAAATCGGTATGCCTCTAGTGATCATTGGGTATAAATTTGAGGTTCTTCTTGCTCATATATCTAAGGGAAAAGTTTTCAATCAGATTATAGTGGCCTCATTTAATAATTTCTTCAATTAATTTATAAAATAAGTCTTTGACAAGTGTTGTATGGTTGAGCTTGAGATTGTTATATTTACGGTAACTTTCATGATTGATTCAGGTAATGTGCCCAACATGTCTTTGCACGGGGATGTTGATGGCAAGTGAGCACGACCCAAGATTCGACCCATTTGACTAAGGTTAAACTTGTAACTTGCATTTCAACTTTTTTTTTTTTCTTTTTCAAAATTTATTTTCGTGTTTGTGACCTAAATATTAGATTTGAAAACTCATATATATACACATATACATAAGGTAGAAATGTTGGTAAAGTAGCACTTTAGGACCAATAAACATTCATATCCAACGAATATCAATTTTAAACTTAAATGTTGGAGTCTCCCTGATGAAAAGAAAAGTGTTTCTAGAATTGATTAAATATTTGTAATGCTTTAATATATAATTATTTGGCATTTTTATTGAAAGCATTTTAATTTAGACTCTTTATGTTAATAATAGAAAAGAGTTGATTCTT ATGTCTCTACCTTCTATCTTCGCTCCTTCCTCTCATTTTCCCCTCCCAATTTCACATTTCAAGCCCTCTCGCCATTGCAGAGCTTCAATTTTCTTGTCCATCGATTATAGATGCTGCAAGTCCATCTATGCATCCTCTAGAAGTATTTCCATACGATCGCCGCGCATCTGCGCTTCTTCGTCCGATGGCGCGTCGGCTTCAGTTCCCTCTGATAGTGATAACACTTCCAGTAACTTTTGTATTATAGAAGGACCGGAGACCGTTCAGGATTTTGTTCAGATGCAATTCCAGGAAATTCAAGACAACATAAGGAGTCGTCGTAATAAAATTTTTCTTCTAATGGAAGAGGTTAGAAGATTACGAATTCAACAACGTTTGAAGAATCTAAAACCTATCGATGAGAATGACATTGAAGAGGCGAATGAGATGCCTGACATTCCATCATCTATTCCTTTTCTTCCCCACGTGACACCTAAGACATTGAAGCAGCAATATTTAACCAGCTTGTCAGTTATATGGGGAATAATTGTATTTGGTGGCCTTATTGCCCCAACTCTGGAGCTAAAATTGGGATTAGGTGGCACTTCGTACGAAGATTTCATCCGCAACATGCATTTGCCTATGCAATTAAGTCAAGTGGATCCCATAGTGGCGTCATTTTCAGGTGGAGCGGTAGGTGTCATCTCGGCCTTGATGTTAATTGAAGCCAACAATGTTGAGCAACAAGAGAAAAAAAGGTGTAAATATTGTCATGGAACTGGGTATTTGGCTTGTGCTCGATGTTCTTCCAGTGGCGTCTGCTTAAGTGCTGACCCCATCTCACTATCTGCTTCTTCTAGCCGCCCTTTACGAATGCCCAAAACCCAAAGATGTCTCAATTGTTCCGGTGCAGGAAAGGTAATGTGCCCAACATGTCTTTGCACGGGGATGTTGATGGCAAGTGAGCACGACCCAAGATTCGACCCATTTGACTAA ATGTCTCTACCTTCTATCTTCGCTCCTTCCTCTCATTTTCCCCTCCCAATTTCACATTTCAAGCCCTCTCGCCATTGCAGAGCTTCAATTTTCTTGTCCATCGATTATAGATGCTGCAAGTCCATCTATGCATCCTCTAGAAGTATTTCCATACGATCGCCGCGCATCTGCGCTTCTTCGTCCGATGGCGCGTCGGCTTCAGTTCCCTCTGATAGTGATAACACTTCCAGTAACTTTTGTATTATAGAAGGACCGGAGACCGTTCAGGATTTTGTTCAGATGCAATTCCAGGAAATTCAAGACAACATAAGGAGTCGTCGTAATAAAATTTTTCTTCTAATGGAAGAGGTTAGAAGATTACGAATTCAACAACGTTTGAAGAATCTAAAACCTATCGATGAGAATGACATTGAAGAGGCGAATGAGATGCCTGACATTCCATCATCTATTCCTTTTCTTCCCCACGTGACACCTAAGACATTGAAGCAGCAATATTTAACCAGCTTGTCAGTTATATGGGGAATAATTGTATTTGGTGGCCTTATTGCCCCAACTCTGGAGCTAAAATTGGGATTAGGTGGCACTTCGTACGAAGATTTCATCCGCAACATGCATTTGCCTATGCAATTAAGTCAAGTGGATCCCATAGTGGCGTCATTTTCAGGTGGAGCGGTAGGTGTCATCTCGGCCTTGATGTTAATTGAAGCCAACAATGTTGAGCAACAAGAGAAAAAAAGGTGTAAATATTGTCATGGAACTGGGTATTTGGCTTGTGCTCGATGTTCTTCCAGTGGCGTCTGCTTAAGTGCTGACCCCATCTCACTATCTGCTTCTTCTAGCCGCCCTTTACGAATGCCCAAAACCCAAAGATGTCTCAATTGTTCCGGTGCAGGAAAGGTAATGTGCCCAACATGTCTTTGCACGGGGATGTTGATGGCAAGTGAGCACGACCCAAGATTCGACCCATTTGACTAA MSLPSIFAPSSHFPLPISHFKPSRHCRASIFLSIDYRCCKSIYASSRSISIRSPRICASSSDGASASVPSDSDNTSSNFCIIEGPETVQDFVQMQFQEIQDNIRSRRNKIFLLMEEVRRLRIQQRLKNLKPIDENDIEEANEMPDIPSSIPFLPHVTPKTLKQQYLTSLSVIWGIIVFGGLIAPTLELKLGLGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEANNVEQQEKKRCKYCHGTGYLACARCSSSGVCLSADPISLSASSSRPLRMPKTQRCLNCSGAGKVMCPTCLCTGMLMASEHDPRFDPFD* Homology
BLAST of CsaV3_6G040750 vs. NCBI nr
Match: XP_004143326.1 (protein ORANGE-LIKE, chloroplastic [Cucumis sativus] >KGN48271.1 hypothetical protein Csa_003235 [Cucumis sativus]) HSP 1 Score: 640.6 bits (1651), Expect = 7.4e-180 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. NCBI nr
Match: KAA0025248.1 (Chaperone protein dnaJ-related isoform 2 [Cucumis melo var. makuwa] >TYK07419.1 Chaperone protein dnaJ-related isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 609.0 bits (1569), Expect = 2.4e-170 Identity = 309/324 (95.37%), Postives = 314/324 (96.91%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. NCBI nr
Match: XP_008462583.1 (PREDICTED: uncharacterized protein LOC103500908 [Cucumis melo]) HSP 1 Score: 607.4 bits (1565), Expect = 7.0e-170 Identity = 308/324 (95.06%), Postives = 313/324 (96.60%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. NCBI nr
Match: XP_038881290.1 (protein ORANGE-LIKE, chloroplastic [Benincasa hispida]) HSP 1 Score: 598.2 bits (1541), Expect = 4.2e-167 Identity = 303/324 (93.52%), Postives = 309/324 (95.37%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. NCBI nr
Match: KAG7034492.1 (Protein ORANGE-LIKE, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 553.9 bits (1426), Expect = 9.2e-154 Identity = 285/325 (87.69%), Postives = 301/325 (92.62%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy Swiss-Prot
Match: Q8VYD8 (Protein ORANGE-LIKE, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORLIKE PE=1 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 7.6e-111 Identity = 203/272 (74.63%), Postives = 233/272 (85.66%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy Swiss-Prot
Match: A0A0D3MU35 (Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo OX=3656 GN=OR PE=2 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 2.5e-101 Identity = 191/276 (69.20%), Postives = 226/276 (81.88%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy Swiss-Prot
Match: A0A0D3MU50 (Protein ORANGE-ORANGE, chloroplastic OS=Cucumis melo OX=3656 GN=OR PE=2 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 9.4e-101 Identity = 190/276 (68.84%), Postives = 225/276 (81.52%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy Swiss-Prot
Match: Q9FKF4 (Protein ORANGE, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OR PE=1 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 5.1e-99 Identity = 186/270 (68.89%), Postives = 215/270 (79.63%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy Swiss-Prot
Match: A2T1U1 (Protein ORANGE, chloroplastic OS=Brassica oleracea var. botrytis OX=3715 GN=OR PE=1 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.3e-97 Identity = 185/265 (69.81%), Postives = 217/265 (81.89%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy TrEMBL
Match: A0A0A0KKI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452720 PE=4 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 3.6e-180 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy TrEMBL
Match: A0A5D3CAS9 (Chaperone protein dnaJ-related isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001460 PE=4 SV=1) HSP 1 Score: 609.0 bits (1569), Expect = 1.2e-170 Identity = 309/324 (95.37%), Postives = 314/324 (96.91%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy TrEMBL
Match: A0A1S3CHB5 (uncharacterized protein LOC103500908 OS=Cucumis melo OX=3656 GN=LOC103500908 PE=4 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 3.4e-170 Identity = 308/324 (95.06%), Postives = 313/324 (96.60%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy TrEMBL
Match: A0A6J1ITR5 (protein ORANGE-LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478546 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.9e-153 Identity = 284/325 (87.38%), Postives = 301/325 (92.62%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. ExPASy TrEMBL
Match: A0A6J1EK02 (protein ORANGE-LIKE, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433302 PE=4 SV=1) HSP 1 Score: 550.8 bits (1418), Expect = 3.8e-153 Identity = 284/325 (87.38%), Postives = 300/325 (92.31%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. TAIR 10
Match: AT5G06130.2 (chaperone protein dnaJ-related ) HSP 1 Score: 401.7 bits (1031), Expect = 5.4e-112 Identity = 203/272 (74.63%), Postives = 233/272 (85.66%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. TAIR 10
Match: AT5G06130.1 (chaperone protein dnaJ-related ) HSP 1 Score: 364.4 bits (934), Expect = 9.6e-101 Identity = 180/231 (77.92%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. TAIR 10
Match: AT5G61670.1 (Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ) HSP 1 Score: 362.5 bits (929), Expect = 3.6e-100 Identity = 186/270 (68.89%), Postives = 215/270 (79.63%), Query Frame = 0
BLAST of CsaV3_6G040750 vs. TAIR 10
Match: AT5G61670.2 (Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. ) HSP 1 Score: 362.5 bits (929), Expect = 3.6e-100 Identity = 186/270 (68.89%), Postives = 215/270 (79.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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