CsaV3_6G040660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G040660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transmembrane 9 superfamily member
Location	chr6: 23553469 .. 23554235 (+)
RNA-Seq Expression	CsaV3_6G040660
Synteny	CsaV3_6G040660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTATCCTAGGAAAGATATTCGGGATTAGTACTCCAATGGTTGACAGTGTGATCAATTATCTTTTAGCAGCAGGATTTGGCAGTGCCATTATGATATACATATGTTGTATTGCACCAAGAAACATCTATAGGCCAGAGCGTAACGTTGCAACTTGTCACACCAGAAGATTAGTCATACACAACAGATCATCACCTCCCACTTTATGGTACATGAAGTCACCTGCTCAGATGATTCTTGAGGGCCTTGGAATTTTCTTGCCAATCTCCCTTCTAATGGATGATATCTTTGCAAGCCTGTGGGGTTTGAAAATCTGCGGCTCATTCCTCACCTTATTTTCTGCTTTCTTAATGGTCGTCCTAAGTACCTTCGTCAGTGGAATTGCACTTACCAGTATTCAACTACTCAAAGATGATTACAACTGGTGGTGGAGGTAATCCATTCTTCCGGCTAACTTTTGTTTTCTGACCATCTTTTGACTTCTAAACAGAAAAAATGTCATGTTCTTCTAACTTATATGAATGATGGTTATTATAGATCCGTATTGCGTGGGGGTTCGCCGGCGGTGTACATGTTTGGTTATGGTATATACTTTCTTTCAAAAATAAGGAGTGAGAGTGATAGGGGGTTTGTTCTTCCTTTAGTGTACAATTGTTGCATTTGCTATTCATTCTTTCTGGTCCTTGGAACTGTTGGCTTTGGAGCTTCGCTGGTTGCCTTTAAATTCTACATGATGGGATGCAACTCTAAGAAACGATCCTAA

mRNA sequence

ATGGCTGTTATCCTAGGAAAGATATTCGGGATTAGTACTCCAATGGTTGACAGTGTGATCAATTATCTTTTAGCAGCAGGATTTGGCAGTGCCATTATGATATACATATGTTGTATTGCACCAAGAAACATCTATAGGCCAGAGCGTAACGTTGCAACTTGTCACACCAGAAGATTAGTCATACACAACAGATCATCACCTCCCACTTTATGGTACATGAAGTCACCTGCTCAGATGATTCTTGAGGGCCTTGGAATTTTCTTGCCAATCTCCCTTCTAATGGATGATATCTTTGCAAGCCTGTGGGGTTTGAAAATCTGCGGCTCATTCCTCACCTTATTTTCTGCTTTCTTAATGGTCGTCCTAAGTACCTTCGTCAGTGGAATTGCACTTACCAGTATTCAACTACTCAAAGATGATTACAACTGGTGGTGGAGATCCGTATTGCGTGGGGGTTCGCCGGCGGTGTACATGTTTGGTTATGGTATATACTTTCTTTCAAAAATAAGGAGTGAGAGTGATAGGGGGTTTGTTCTTCCTTTAGTGTACAATTGTTGCATTTGCTATTCATTCTTTCTGGTCCTTGGAACTGTTGGCTTTGGAGCTTCGCTGGTTGCCTTTAAATTCTACATGATGGGATGCAACTCTAAGAAACGATCCTAA

Coding sequence (CDS)

ATGGCTGTTATCCTAGGAAAGATATTCGGGATTAGTACTCCAATGGTTGACAGTGTGATCAATTATCTTTTAGCAGCAGGATTTGGCAGTGCCATTATGATATACATATGTTGTATTGCACCAAGAAACATCTATAGGCCAGAGCGTAACGTTGCAACTTGTCACACCAGAAGATTAGTCATACACAACAGATCATCACCTCCCACTTTATGGTACATGAAGTCACCTGCTCAGATGATTCTTGAGGGCCTTGGAATTTTCTTGCCAATCTCCCTTCTAATGGATGATATCTTTGCAAGCCTGTGGGGTTTGAAAATCTGCGGCTCATTCCTCACCTTATTTTCTGCTTTCTTAATGGTCGTCCTAAGTACCTTCGTCAGTGGAATTGCACTTACCAGTATTCAACTACTCAAAGATGATTACAACTGGTGGTGGAGATCCGTATTGCGTGGGGGTTCGCCGGCGGTGTACATGTTTGGTTATGGTATATACTTTCTTTCAAAAATAAGGAGTGAGAGTGATAGGGGGTTTGTTCTTCCTTTAGTGTACAATTGTTGCATTTGCTATTCATTCTTTCTGGTCCTTGGAACTGTTGGCTTTGGAGCTTCGCTGGTTGCCTTTAAATTCTACATGATGGGATGCAACTCTAAGAAACGATCCTAA

Protein sequence

MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS*

Homology

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BLAST of CsaV3_6G040660 vs. NCBI nr
Match: KAE8647422.1 (hypothetical protein Csa_003646 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV
Sbjct: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60

Query: 61  IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 120
           IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV
Sbjct: 61  IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 120

Query: 121 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 180
           VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP
Sbjct: 121 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 180

Query: 181 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS
Sbjct: 181 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 220

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BLAST of CsaV3_6G040660 vs. NCBI nr
Match: XP_031743866.1 (transmembrane 9 superfamily member 5-like [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV
Sbjct: 381 MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 440

Query: 61  IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 120
           IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV
Sbjct: 441 IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 500

Query: 121 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 180
           VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP
Sbjct: 501 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 560

Query: 181 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS
Sbjct: 561 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 600

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BLAST of CsaV3_6G040660 vs. NCBI nr
Match: XP_008462569.1 (PREDICTED: transmembrane 9 superfamily member 5-like isoform X1 [Cucumis melo] >KAA0025258.1 transmembrane 9 superfamily member 5-like isoform X1 [Cucumis melo var. makuwa] >TYK07409.1 transmembrane 9 superfamily member 5-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 193/222 (86.94%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           +AVILGKIFGISTP+VDSVI YLL AGFGSAIMIYICCIAPRNIYRPERN ATCHTR+L+
Sbjct: 387 IAVILGKIFGISTPIVDSVICYLLVAGFGSAIMIYICCIAPRNIYRPERNAATCHTRKLL 446

Query: 61  IHNRSSP--PTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFL 120
           ++NRSSP  PTLWYMK+PAQM+LEGLGIFLPIS LMDDI+ASLWGLKIC SFLTLF+AFL
Sbjct: 447 LYNRSSPPAPTLWYMKTPAQMMLEGLGIFLPISPLMDDIYASLWGLKICSSFLTLFAAFL 506

Query: 121 MVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFV 180
           MVVL+TF+SG+ALTS+QLLK+DYNWWWRS+LRGGSPA+YMFGYGIYF+SKIRSE+DRGFV
Sbjct: 507 MVVLTTFISGMALTSVQLLKNDYNWWWRSILRGGSPAIYMFGYGIYFISKIRSENDRGFV 566

Query: 181 LPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LPLVYNCCICYSFFLV GTVGFGASLVAFKFYMMGC++KKRS
Sbjct: 567 LPLVYNCCICYSFFLVFGTVGFGASLVAFKFYMMGCDTKKRS 608

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BLAST of CsaV3_6G040660 vs. NCBI nr
Match: XP_008462571.1 (PREDICTED: transmembrane 9 superfamily member 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 180/224 (80.36%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 4   ILGKIFGISTPMVDSVINYLL-----AAGFGSAIMIYICCIAPRNIYRPERNVATCHTRR 63
           +LG I G+ T  +  +I  LL      AGFGSAIMIYICCIAPRNIYRPERN ATCHTR+
Sbjct: 304 LLGAILGVGTQHLMLIIAMLLVSEYDVAGFGSAIMIYICCIAPRNIYRPERNAATCHTRK 363

Query: 64  LVIHNRSSP--PTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSA 123
           L+++NRSSP  PTLWYMK+PAQM+LEGLGIFLPIS LMDDI+ASLWGLKIC SFLTLF+A
Sbjct: 364 LLLYNRSSPPAPTLWYMKTPAQMMLEGLGIFLPISPLMDDIYASLWGLKICSSFLTLFAA 423

Query: 124 FLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRG 183
           FLMVVL+TF+SG+ALTS+QLLK+DYNWWWRS+LRGGSPA+YMFGYGIYF+SKIRSE+DRG
Sbjct: 424 FLMVVLTTFISGMALTSVQLLKNDYNWWWRSILRGGSPAIYMFGYGIYFISKIRSENDRG 483

Query: 184 FVLPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           FVLPLVYNCCICYSFFLV GTVGFGASLVAFKFYMMGC++KKRS
Sbjct: 484 FVLPLVYNCCICYSFFLVFGTVGFGASLVAFKFYMMGCDTKKRS 527

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BLAST of CsaV3_6G040660 vs. NCBI nr
Match: XP_038880907.1 (transmembrane 9 superfamily member 5-like [Benincasa hispida])

HSP 1 Score: 345.9 bits (886), Expect = 2.6e-91
Identity = 171/220 (77.73%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           +AV+LG +FGISTPMVD+ I  LL AGFGSAI++Y+ CIA R+ YRPERN ATC TRRL+
Sbjct: 382 IAVVLGMVFGISTPMVDNAIYNLLLAGFGSAILMYMWCIAIRDFYRPERNTATCSTRRLL 441

Query: 61  IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 120
           ++NR SP  LWYMK+PAQM+L GLGIFLPIS LMDDI+ASLWGLK+CGSFLTLF+AFLMV
Sbjct: 442 LYNR-SPSPLWYMKTPAQMVLGGLGIFLPISPLMDDIYASLWGLKVCGSFLTLFAAFLMV 501

Query: 121 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 180
           +L+T VSG+ LTSIQLLK DY+WWWRSVLRGGSPA+YMFGYGIYFLSKI++ESD+ FVLP
Sbjct: 502 ILTTIVSGVTLTSIQLLKHDYDWWWRSVLRGGSPALYMFGYGIYFLSKIKTESDKEFVLP 561

Query: 181 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LVYNCCICYSFFLVLGTVGFGASL AFK+YM G  +KKRS
Sbjct: 562 LVYNCCICYSFFLVLGTVGFGASLFAFKYYMAG-YTKKRS 599

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BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot
Match: F4HW17 (Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana OX=3702 GN=TMN5 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-21
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 64  RSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGS-FLTLFSAFLMVVL 123
           R  PP  WY +   Q+ L G   F  + L    ++ASLWG KI  S  + LF+  +++ L
Sbjct: 436 REIPPQNWYRRKLYQVFLGGFVPFSAVVLEWHQLYASLWGFKIYTSPGIMLFTFIVLIFL 495

Query: 124 STFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLPLV 183
           S+ V GI LT IQL  +D+ WWWRS+L GG  AV+M+GYG+ F  +            L 
Sbjct: 496 SSSV-GIILTYIQLSGEDHEWWWRSILCGGFTAVFMYGYGVLFYLRSDMTGFLQLSFYLG 555

Query: 184 YNCCICYSFFLVLGTVGFGASLV 206
           Y   +CY+ FLVLGT+ F ASL+
Sbjct: 556 YTALLCYALFLVLGTISFLASLM 577

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BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot
Match: Q9FHT4 (Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana OX=3702 GN=TMN4 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.5e-21
Identity = 72/195 (36.92%), Postives = 107/195 (54.87%), Query Frame = 0


Query: 14  PMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLVIHNRSSPPTLWYM 73
           P    V+ +L+ A   S ++I +  IA +N  R     A C T +   + R  PP  WY 
Sbjct: 395 PFGTIVVIFLIWALVTSPLLI-LGGIAGKN--RKSEFQAPCRTTK---YPREIPPMRWYR 454

Query: 74  KSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMVVLSTFVSGIALTS 133
           ++  QM + G   F  I + +  IFAS+WG +I   +  L   FL++V+ T    +ALT 
Sbjct: 455 RTLPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILSIVFLILVIVTAFITVALTY 514

Query: 134 IQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP---LVYNCCICYS 193
            QL  +D+ WWWRS+L GGS  ++++ Y +Y+    RS+   GF+       Y  CICY 
Sbjct: 515 FQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYY-YARSDMS-GFMQTSFFFGYMACICYG 574

Query: 194 FFLVLGTVGFGASLV 206
           FFL+LGT+GF ASL+
Sbjct: 575 FFLMLGTIGFCASLL 581

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BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot
Match: Q940S0 (Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana OX=3702 GN=TMN2 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.5e-21
Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 52  ATCHTRRLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFL 111
           A C T +   + R  PP  WY  +  QM + G   F  I + +  IFAS+WG +I   + 
Sbjct: 429 APCRTTK---YPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYS 488

Query: 112 TLFSAFLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRS 171
            LF  F+++++ T    +ALT  QL  +D+ WWWRS L GGS  ++++ Y +Y+    RS
Sbjct: 489 ILFIVFIILIIVTAFITVALTYFQLAAEDHQWWWRSFLCGGSTGLFIYAYCLYYY-YARS 548

Query: 172 ESDRGFVLP---LVYNCCICYSFFLVLGTVGFGASLV 206
           +   GF+       Y  CICY FFL+LGTVGF A+L+
Sbjct: 549 DMS-GFMQTSFFFGYMACICYGFFLMLGTVGFRAALL 580

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BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot
Match: Q9ZPS7 (Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana OX=3702 GN=TMN3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 58  RLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAF 117
           R   + R  PP  WY  +  QM + G   F  I + +  IFAS+WG +I   +  LF  F
Sbjct: 432 RTTKYPREIPPLPWYRSAVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVF 491

Query: 118 LMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGF 177
           +++++ T    +ALT  QL  +D+ WWWRS L GGS  ++++ Y +Y+    RS+   GF
Sbjct: 492 IILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYAYCLYYY-YARSDMS-GF 551

Query: 178 VLP---LVYNCCICYSFFLVLGTVGFGASLV 206
           +       Y  CICY FFL+LGTVGF A+L+
Sbjct: 552 MQTSFFFGYMACICYGFFLMLGTVGFRAALL 580

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BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot
Match: Q54ZW0 (Putative phagocytic receptor 1b OS=Dictyostelium discoideum OX=44689 GN=phg1b PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.7e-17
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 0


Query: 52  ATCHTRRLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFL 111
           A C T+      R  PP  WY + P Q+++ G   F  I + +  IF S+WG      + 
Sbjct: 424 APCRTKNF---PREVPPIQWYRRLPCQILIAGFLPFSAIYIELFYIFNSVWGHSTYTLYG 483

Query: 112 TLFSAFLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGI---YFLSK 171
            L   FL+++  T    +ALT  QL  +D+ WWW S + GGS  V+++ Y I   Y++S 
Sbjct: 484 ILCLVFLILINVTVCITVALTYFQLSMEDHKWWWNSFINGGSTVVFIYMYSIYYYYYISH 543

Query: 172 IRSESDRGFVLPLVYNCCICYSFFLVLGTVGFGASLVAFK 209
           +       F     Y   +C+ FF++LGTVGF +SL+  K
Sbjct: 544 MYGLLQATFY--FTYMLIVCFFFFILLGTVGFYSSLIFVK 578

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BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL
Match: A0A0A0KKH6 (Transmembrane 9 superfamily member OS=Cucumis sativus OX=3659 GN=Csa_6G452130 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 7.5e-121
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV
Sbjct: 285 MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 344

Query: 61  IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 120
           IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV
Sbjct: 345 IHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMV 404

Query: 121 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 180
           VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP
Sbjct: 405 VLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP 464

Query: 181 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS
Sbjct: 465 LVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 504

[Close]

BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL
Match: A0A5D3CAR6 (Transmembrane 9 superfamily member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001350 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 193/222 (86.94%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           +AVILGKIFGISTP+VDSVI YLL AGFGSAIMIYICCIAPRNIYRPERN ATCHTR+L+
Sbjct: 387 IAVILGKIFGISTPIVDSVICYLLVAGFGSAIMIYICCIAPRNIYRPERNAATCHTRKLL 446

Query: 61  IHNRSSP--PTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFL 120
           ++NRSSP  PTLWYMK+PAQM+LEGLGIFLPIS LMDDI+ASLWGLKIC SFLTLF+AFL
Sbjct: 447 LYNRSSPPAPTLWYMKTPAQMMLEGLGIFLPISPLMDDIYASLWGLKICSSFLTLFAAFL 506

Query: 121 MVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFV 180
           MVVL+TF+SG+ALTS+QLLK+DYNWWWRS+LRGGSPA+YMFGYGIYF+SKIRSE+DRGFV
Sbjct: 507 MVVLTTFISGMALTSVQLLKNDYNWWWRSILRGGSPAIYMFGYGIYFISKIRSENDRGFV 566

Query: 181 LPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LPLVYNCCICYSFFLV GTVGFGASLVAFKFYMMGC++KKRS
Sbjct: 567 LPLVYNCCICYSFFLVFGTVGFGASLVAFKFYMMGCDTKKRS 608

[Close]

BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL
Match: A0A1S3CH77 (Transmembrane 9 superfamily member OS=Cucumis melo OX=3656 GN=LOC103500897 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 193/222 (86.94%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           +AVILGKIFGISTP+VDSVI YLL AGFGSAIMIYICCIAPRNIYRPERN ATCHTR+L+
Sbjct: 387 IAVILGKIFGISTPIVDSVICYLLVAGFGSAIMIYICCIAPRNIYRPERNAATCHTRKLL 446

Query: 61  IHNRSSP--PTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFL 120
           ++NRSSP  PTLWYMK+PAQM+LEGLGIFLPIS LMDDI+ASLWGLKIC SFLTLF+AFL
Sbjct: 447 LYNRSSPPAPTLWYMKTPAQMMLEGLGIFLPISPLMDDIYASLWGLKICSSFLTLFAAFL 506

Query: 121 MVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFV 180
           MVVL+TF+SG+ALTS+QLLK+DYNWWWRS+LRGGSPA+YMFGYGIYF+SKIRSE+DRGFV
Sbjct: 507 MVVLTTFISGMALTSVQLLKNDYNWWWRSILRGGSPAIYMFGYGIYFISKIRSENDRGFV 566

Query: 181 LPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           LPLVYNCCICYSFFLV GTVGFGASLVAFKFYMMGC++KKRS
Sbjct: 567 LPLVYNCCICYSFFLVFGTVGFGASLVAFKFYMMGCDTKKRS 608

[Close]

BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL
Match: A0A1S3CIT9 (Transmembrane 9 superfamily member OS=Cucumis melo OX=3656 GN=LOC103500897 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.2e-99
Identity = 180/224 (80.36%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 4   ILGKIFGISTPMVDSVINYLL-----AAGFGSAIMIYICCIAPRNIYRPERNVATCHTRR 63
           +LG I G+ T  +  +I  LL      AGFGSAIMIYICCIAPRNIYRPERN ATCHTR+
Sbjct: 304 LLGAILGVGTQHLMLIIAMLLVSEYDVAGFGSAIMIYICCIAPRNIYRPERNAATCHTRK 363

Query: 64  LVIHNRSSP--PTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSA 123
           L+++NRSSP  PTLWYMK+PAQM+LEGLGIFLPIS LMDDI+ASLWGLKIC SFLTLF+A
Sbjct: 364 LLLYNRSSPPAPTLWYMKTPAQMMLEGLGIFLPISPLMDDIYASLWGLKICSSFLTLFAA 423

Query: 124 FLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRG 183
           FLMVVL+TF+SG+ALTS+QLLK+DYNWWWRS+LRGGSPA+YMFGYGIYF+SKIRSE+DRG
Sbjct: 424 FLMVVLTTFISGMALTSVQLLKNDYNWWWRSILRGGSPAIYMFGYGIYFISKIRSENDRG 483

Query: 184 FVLPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
           FVLPLVYNCCICYSFFLV GTVGFGASLVAFKFYMMGC++KKRS
Sbjct: 484 FVLPLVYNCCICYSFFLVFGTVGFGASLVAFKFYMMGCDTKKRS 527

[Close]

BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL
Match: A0A6J1HF92 (Transmembrane 9 superfamily member OS=Cucurbita moschata OX=3662 GN=LOC111463439 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 7.9e-70
Identity = 138/222 (62.16%), Postives = 170/222 (76.58%), Query Frame = 0


Query: 1   MAVILGKIFGISTPMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLV 60
           +AV+L KIF  ++ MV+  I  L  AG GSAI++Y+CCIA R  Y PE +V  C TR + 
Sbjct: 383 LAVLLAKIFVSNSLMVNDAIYILSIAGIGSAILVYLCCIATRKWYEPEHDVTACATRMVD 442

Query: 61  IHNRSSPP--TLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFL 120
           + N   PP  +LWYMK+PAQM+L GL +FLP+ L+MDDI+ASLWGLK+CGSF TLF+ F 
Sbjct: 443 VFN---PPASSLWYMKTPAQMVLVGLSVFLPVCLVMDDIYASLWGLKVCGSFFTLFAVFS 502

Query: 121 MVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFV 180
            V+++T +S  ALT +QLLK+DYNWWWRSVLRGGSPA+ MF YGIYFLSKI++ESDR F+
Sbjct: 503 TVIITTIISAYALTGVQLLKNDYNWWWRSVLRGGSPAILMFVYGIYFLSKIKTESDREFL 562

Query: 181 LPLVYNCCICYSFFLVLGTVGFGASLVAFKFYMMGCNSKKRS 221
             LVYNCCICYS FLVLGTV F AS  AF+FY M   +KKRS
Sbjct: 563 PLLVYNCCICYSLFLVLGTVSFRASHFAFRFY-MAVVAKKRS 600

[Close]

BLAST of CsaV3_6G040660 vs. TAIR 10
Match: AT1G08350.1 (Endomembrane protein 70 protein family )

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-22
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 64  RSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGS-FLTLFSAFLMVVL 123
           R  PP  WY +   Q+ L G   F  + L    ++ASLWG KI  S  + LF+  +++ L
Sbjct: 355 REIPPQNWYRRKLYQVFLGGFVPFSAVVLEWHQLYASLWGFKIYTSPGIMLFTFIVLIFL 414

Query: 124 STFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLPLV 183
           S+ V GI LT IQL  +D+ WWWRS+L GG  AV+M+GYG+ F  +            L 
Sbjct: 415 SSSV-GIILTYIQLSGEDHEWWWRSILCGGFTAVFMYGYGVLFYLRSDMTGFLQLSFYLG 474

Query: 184 YNCCICYSFFLVLGTVGFGASLV 206
           Y   +CY+ FLVLGT+ F ASL+
Sbjct: 475 YTALLCYALFLVLGTISFLASLM 496

[Close]

BLAST of CsaV3_6G040660 vs. TAIR 10
Match: AT1G08350.2 (Endomembrane protein 70 protein family )

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-22
Identity = 60/143 (41.96%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 64  RSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGS-FLTLFSAFLMVVL 123
           R  PP  WY +   Q+ L G   F  + L    ++ASLWG KI  S  + LF+  +++ L
Sbjct: 436 REIPPQNWYRRKLYQVFLGGFVPFSAVVLEWHQLYASLWGFKIYTSPGIMLFTFIVLIFL 495

Query: 124 STFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLPLV 183
           S+ V GI LT IQL  +D+ WWWRS+L GG  AV+M+GYG+ F  +            L 
Sbjct: 496 SSSV-GIILTYIQLSGEDHEWWWRSILCGGFTAVFMYGYGVLFYLRSDMTGFLQLSFYLG 555

Query: 184 YNCCICYSFFLVLGTVGFGASLV 206
           Y   +CY+ FLVLGT+ F ASL+
Sbjct: 556 YTALLCYALFLVLGTISFLASLM 577

[Close]

BLAST of CsaV3_6G040660 vs. TAIR 10
Match: AT5G37310.1 (Endomembrane protein 70 protein family )

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-22
Identity = 72/195 (36.92%), Postives = 107/195 (54.87%), Query Frame = 0


Query: 14  PMVDSVINYLLAAGFGSAIMIYICCIAPRNIYRPERNVATCHTRRLVIHNRSSPPTLWYM 73
           P    V+ +L+ A   S ++I +  IA +N  R     A C T +   + R  PP  WY 
Sbjct: 395 PFGTIVVIFLIWALVTSPLLI-LGGIAGKN--RKSEFQAPCRTTK---YPREIPPMRWYR 454

Query: 74  KSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAFLMVVLSTFVSGIALTS 133
           ++  QM + G   F  I + +  IFAS+WG +I   +  L   FL++V+ T    +ALT 
Sbjct: 455 RTLPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILSIVFLILVIVTAFITVALTY 514

Query: 134 IQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGFVLP---LVYNCCICYS 193
            QL  +D+ WWWRS+L GGS  ++++ Y +Y+    RS+   GF+       Y  CICY 
Sbjct: 515 FQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYY-YARSDMS-GFMQTSFFFGYMACICYG 574

Query: 194 FFLVLGTVGFGASLV 206
           FFL+LGT+GF ASL+
Sbjct: 575 FFLMLGTIGFCASLL 581

[Close]

BLAST of CsaV3_6G040660 vs. TAIR 10
Match: AT1G14670.1 (Endomembrane protein 70 protein family )

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-22
Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 52  ATCHTRRLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFL 111
           A C T +   + R  PP  WY  +  QM + G   F  I + +  IFAS+WG +I   + 
Sbjct: 429 APCRTTK---YPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYS 488

Query: 112 TLFSAFLMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRS 171
            LF  F+++++ T    +ALT  QL  +D+ WWWRS L GGS  ++++ Y +Y+    RS
Sbjct: 489 ILFIVFIILIIVTAFITVALTYFQLAAEDHQWWWRSFLCGGSTGLFIYAYCLYYY-YARS 548

Query: 172 ESDRGFVLP---LVYNCCICYSFFLVLGTVGFGASLV 206
           +   GF+       Y  CICY FFL+LGTVGF A+L+
Sbjct: 549 DMS-GFMQTSFFFGYMACICYGFFLMLGTVGFRAALL 580

[Close]

BLAST of CsaV3_6G040660 vs. TAIR 10
Match: AT2G01970.1 (Endomembrane protein 70 protein family )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 58  RLVIHNRSSPPTLWYMKSPAQMILEGLGIFLPISLLMDDIFASLWGLKICGSFLTLFSAF 117
           R   + R  PP  WY  +  QM + G   F  I + +  IFAS+WG +I   +  LF  F
Sbjct: 432 RTTKYPREIPPLPWYRSAVPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVF 491

Query: 118 LMVVLSTFVSGIALTSIQLLKDDYNWWWRSVLRGGSPAVYMFGYGIYFLSKIRSESDRGF 177
           +++++ T    +ALT  QL  +D+ WWWRS L GGS  ++++ Y +Y+    RS+   GF
Sbjct: 492 IILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYAYCLYYY-YARSDMS-GF 551

Query: 178 VLP---LVYNCCICYSFFLVLGTVGFGASLV 206
           +       Y  CICY FFL+LGTVGF A+L+
Sbjct: 552 MQTSFFFGYMACICYGFFLMLGTVGFRAALL 580

The following BLAST results are available for this feature:

BLAST of CsaV3_6G040660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647422.1	1.5e-120	100.00	hypothetical protein Csa_003646 [Cucumis sativus]	[more]
XP_031743866.1	1.5e-120	100.00	transmembrane 9 superfamily member 5-like [Cucumis sativus]	[more]
XP_008462569.1	6.8e-108	86.94	PREDICTED: transmembrane 9 superfamily member 5-like isoform X1 [Cucumis melo] >...	[more]
XP_008462571.1	1.3e-98	80.36	PREDICTED: transmembrane 9 superfamily member 2-like isoform X2 [Cucumis melo]	[more]
XP_038880907.1	2.6e-91	77.73	transmembrane 9 superfamily member 5-like [Benincasa hispida]	[more]

BLAST of CsaV3_6G040660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HW17	3.8e-21	41.96	Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana OX=3702 GN=TMN5 PE=...	[more]
Q9FHT4	6.5e-21	36.92	Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana OX=3702 GN=TMN4 PE=...	[more]
Q940S0	8.5e-21	38.85	Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana OX=3702 GN=TMN2 PE=...	[more]
Q9ZPS7	1.9e-20	39.07	Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana OX=3702 GN=TMN3 PE=...	[more]
Q54ZW0	5.7e-17	33.75	Putative phagocytic receptor 1b OS=Dictyostelium discoideum OX=44689 GN=phg1b PE...	[more]

BLAST of CsaV3_6G040660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKH6	7.5e-121	100.00	Transmembrane 9 superfamily member OS=Cucumis sativus OX=3659 GN=Csa_6G452130 PE...	[more]
A0A5D3CAR6	3.3e-108	86.94	Transmembrane 9 superfamily member OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CH77	3.3e-108	86.94	Transmembrane 9 superfamily member OS=Cucumis melo OX=3656 GN=LOC103500897 PE=3 ...	[more]
A0A1S3CIT9	6.2e-99	80.36	Transmembrane 9 superfamily member OS=Cucumis melo OX=3656 GN=LOC103500897 PE=3 ...	[more]
A0A6J1HF92	7.9e-70	62.16	Transmembrane 9 superfamily member OS=Cucurbita moschata OX=3662 GN=LOC111463439...	[more]

BLAST of CsaV3_6G040660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08350.1	2.7e-22	41.96	Endomembrane protein 70 protein family	[more]
AT1G08350.2	2.7e-22	41.96	Endomembrane protein 70 protein family	[more]
AT5G37310.1	4.6e-22	36.92	Endomembrane protein 70 protein family	[more]
AT1G14670.1	6.0e-22	38.85	Endomembrane protein 70 protein family	[more]
AT2G01970.1	1.3e-21	39.07	Endomembrane protein 70 protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004240	Nonaspanin (TM9SF)	PFAM	PF02990	EMP70	coord: 55..168 e-value: 2.7E-22 score: 79.1
IPR004240	Nonaspanin (TM9SF)	PANTHER	PTHR10766	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	coord: 3..206
None	No IPR available	PANTHER	PTHR10766:SF119	TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5	coord: 3..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G040660.1	CsaV3_6G040660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane