CsaV3_6G040640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCTCAAAATCCCCATATCCATTTTATTAATTCTCACAATCGCCATAGCCTCCGATCCCGACCCACTACAAGATTTCTGCATCCCAAATCCCAAATCTTTTCCAGATCAATTATGCAAGAACTCAACCGCCGTCACAGCAGACGACTTCGTCTTCTCCGGAGCAAAATCCGCCGGACCCTTCTCGGGAACTGGATTCGCAACCGTAGCGGCAAACTCAATCAATTTCCCAGGATTGAACACGCTGGGAATGTCGTTGGTACGCGTCGATCTAAAAGAGGGGGCAATAAATCCGCCGCACGTGCACCCACGAGCGGCGGAAATGGTGTACGTGGTTGAGGGGAAGGTTTATGCGGGGTTTGTAGACTCGGGGAACAGGGTTTACGCGAAGGTAATTGAAGAAGGGGAAGTGATGGTGATACCGAGAGGGGTGGTTCATTTTCAGATGAACGTTGGGAAGAGAAGAGCGACGGTTTTTGGGTGTTTCAATAGTCAGAATCCGGGGACTCAGAAAATGGCTGCGGCCATTTTTGGGTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGTTTGAGTTCTAAGGAAATTAGGAGGATGAAGAGAATGTTTGATTCTTAATTACACATTTTTCTAATCTATATATATAGTTATTCTTACATTTTATGTTGTGATGTTGATCTAAAGACAAGGTTTTGATTTTGATTTTTTTGGGTGGATTAGGTGTTGTTGCATGTTTTCTCAATGAATTCCATTAGATTAAAATAGGTGAGTAGATAAGTTACTTATTATTATTTTAAATTACACGTGGTATATTTAGTAATTTAAATTTTAAAGATAATGGGTCGATTTGAATAGTAAGATTAAAAATCAAAATTAATCAATTAAGTATAATTAAACATGATTTCTATATCTTTTTCTTTCCACTATATAAAATTTATGGATCCGTTATTGTTAATGAGGGAATGTGGTTGAAAAGTATATGCAATCAAAAAGGGTGTGATTTGAAATTTTTTATCTCTACCGGATAAAAAAAAAAGAGAGGTTAAGAAGAAAGTTTCTAAATCTTTTGAGTATATTGAATTTTTAAAAAAAGGATTAATCTAGGTCATTGCAATTTTCATGTTAATATCATAACGCTTTTGAACTTTAAAAAGTGTAATTGGTCTTTAAATTTTTTACTTTTATGATACTTATATTTGTCATTTAAAAAAAATCATAAAGCTATACAAATTATTCCATTAAAGCTAACATGTAAGCTTAACTTAACTAATATTTGTATGTTCACAACGACAAAAAGTATTGAATTCAAATCTCTATGTCCATGACTAATCCAAATACGACGAATTAAAGTACGACAACCTTTAATTAAACACAAAATTAAATTAGATCGTGTATTTAACTCAAATTCAATTTTTAAAATTTTGAAAACTAAACATAAAATTTAGTATAAAACTCTCAAATTATATTAGATAATTATTGTTAATTAGGTAAATCACATGTCAAACAATGACCCTAAAAAGGGAATTCAGCATATACTTAAATATGTAACTACTAATTCCTCTACTAAAGGAAGCTAATTACGTTGATCAGAGTAATATATAACTGGACTCCATCTTTTTATCCTGATTCAATCTCCCAGCTTACTGACCCCTCTCTGTCTTCTAGTATCTCCTTAACAAAATATATTCATAATATTGTGTAATATTATATAATTGAGACTGAAAAAGTTGTACCAAAAAAGTAACTTTATAACTTTATATTTGTAGTTTAGTTAAGGCTCGAGGAAGTTATAAATAAAAGGGTCCTGTAAGAAAGACAGTGTGTGAGAGTGTGCTTTATTTCAAATCTGAAAGAAAAAGAAAGAAAAAAGGATTGAAATTATGGCAATTAGATCAAAAGTAAGATCAGGTGAGCTGCAGAATCCTCTTGTTCTTGGAAGAGTAATTGGAGATGTTGTTGATCCCTTCAGTCCAACCATTAAAATGTCTGTCACTTTCACCAATAACAAACAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCTCTTTCCTTCAAACCTAGGGTTCATATTCAAGGAGAAGATATGAGACCATTGTTCACTCTGGTAAATCATTATCTTTTTTTACCTTTTTTTTTCTTAAATAAAAGATTGATAGCTTTTTGTTTTTTTTTTTTTGGTTAGGTTATGGTTGACCCTGATGTTCCTGGCCCTAGTGATCCTTACTTGAGGGAACACCTTCACTGGTATATATATAAAAAACTTCCATTCATTTTTAAATTTTGAGCTCTCTATTGTTGAAAAAAAAATTTGAACTTTGAGAAAACCCATTTCCAAAATAGTAATTTCTTTCTATTTAGAGCCTATTTTGTATGATTTTCTCAATGGTATTTTTTTAAATATATATATATATATATATATCTTTTTTTCTATTTTAAAGATGCAAAATTGAAAACCCATTACCAAAACAATAAATTTATGTTTGAATCCAATTTCAATTTTATCAACAAATTGGAAATGGTAATGACCTAACTTTTTACCTTTATTTGGATCTTTTTATTTTTCAGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGTAAGGATTACTATTTTTTAAAATAAATAAATAAATGTATTTGTGTTTTGAATTAATTTTAATTGAAAATGTTTGGGATGTGGAATATATATATGAGACAGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCAACAATAGGAATTCACAGGTTTGTGTTTATTCTGTTCAAACAAAAACAGCGTCGGTCAGTAGTGAATCCTCCTTCATCAAGGGATCGTTTCAACACTCGAAGATTTTCTTGTGAGAATGATTTGGGTCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGAGAAACTGCTGCAAGGAGGCGATAA ATGTTCCTCAAAATCCCCATATCCATTTTATTAATTCTCACAATCGCCATAGCCTCCGATCCCGACCCACTACAAGATTTCTGCATCCCAAATCCCAAATCTTTTCCAGATCAATTATGCAAGAACTCAACCGCCGTCACAGCAGACGACTTCGTCTTCTCCGGAGCAAAATCCGCCGGACCCTTCTCGGGAACTGGATTCGCAACCGTAGCGGCAAACTCAATCAATTTCCCAGGATTGAACACGCTGGGAATGTCGTTGGTACGCGTCGATCTAAAAGAGGGGGCAATAAATCCGCCGCACGTGCACCCACGAGCGGCGGAAATGGTGTACGTGGTTGAGGGGAAGGTTTATGCGGGGTTTGTAGACTCGGGGAACAGGGTTTACGCGAAGGTAATTGAAGAAGGGGAAGTGATGGTGATACCGAGAGGGGTGGTTCATTTTCAGATGAACGTTGGGAAGAGAAGAGCGACGGTTTTTGGGTGTTTCAATAGTCAGAATCCGGGGACTCAGAAAATGGCTGCGGCCATTTTTGGGTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGTGAGCTGCAGAATCCTCTTGTTCTTGGAAGAGTAATTGGAGATGTTGTTGATCCCTTCAGTCCAACCATTAAAATGTCTGTCACTTTCACCAATAACAAACAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCTCTTTCCTTCAAACCTAGGGTTCATATTCAAGGAGAAGATATGAGACCATTGTTCACTCTGGTTATGGTTGACCCTGATGTTCCTGGCCCTAGTGATCCTTACTTGAGGGAACACCTTCACTGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCAACAATAGGAATTCACAGGTTTGTGTTTATTCTGTTCAAACAAAAACAGCGTCGGTCAGTAGTGAATCCTCCTTCATCAAGGGATCGTTTCAACACTCGAAGATTTTCTTGTGAGAATGATTTGGGTCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGAGAAACTGCTGCAAGGAGGCGATAA ATGTTCCTCAAAATCCCCATATCCATTTTATTAATTCTCACAATCGCCATAGCCTCCGATCCCGACCCACTACAAGATTTCTGCATCCCAAATCCCAAATCTTTTCCAGATCAATTATGCAAGAACTCAACCGCCGTCACAGCAGACGACTTCGTCTTCTCCGGAGCAAAATCCGCCGGACCCTTCTCGGGAACTGGATTCGCAACCGTAGCGGCAAACTCAATCAATTTCCCAGGATTGAACACGCTGGGAATGTCGTTGGTACGCGTCGATCTAAAAGAGGGGGCAATAAATCCGCCGCACGTGCACCCACGAGCGGCGGAAATGGTGTACGTGGTTGAGGGGAAGGTTTATGCGGGGTTTGTAGACTCGGGGAACAGGGTTTACGCGAAGGTAATTGAAGAAGGGGAAGTGATGGTGATACCGAGAGGGGTGGTTCATTTTCAGATGAACGTTGGGAAGAGAAGAGCGACGGTTTTTGGGTGTTTCAATAGTCAGAATCCGGGGACTCAGAAAATGGCTGCGGCCATTTTTGGGTCTGGGATTAAAGAAGAGCTTTTGGAGAAGGCTTTTGGTGAGCTGCAGAATCCTCTTGTTCTTGGAAGAGTAATTGGAGATGTTGTTGATCCCTTCAGTCCAACCATTAAAATGTCTGTCACTTTCACCAATAACAAACAAGTCCTCAATGGCCATGAATTCTTCCCTTCTTCTCTTTCCTTCAAACCTAGGGTTCATATTCAAGGAGAAGATATGAGACCATTGTTCACTCTGGTTATGGTTGACCCTGATGTTCCTGGCCCTAGTGATCCTTACTTGAGGGAACACCTTCACTGGTTGGTGACTGACATTCCAGGAACTACTGATGCTACTTTTGGAAAAGAAGAAATGAGCTATGAAATTCCAAAGCCAACAATAGGAATTCACAGGTTTGTGTTTATTCTGTTCAAACAAAAACAGCGTCGGTCAGTAGTGAATCCTCCTTCATCAAGGGATCGTTTCAACACTCGAAGATTTTCTTGTGAGAATGATTTGGGTCTTCCTGTTGCTGCTGTCTATTTCAATGCTCAAAGAGAAACTGCTGCAAGGAGGCGATAA MFLKIPISILLILTIAIASDPDPLQDFCIPNPKSFPDQLCKNSTAVTADDFVFSGAKSAGPFSGTGFATVAANSINFPGLNTLGMSLVRVDLKEGAINPPHVHPRAAEMVYVVEGKVYAGFVDSGNRVYAKVIEEGEVMVIPRGVVHFQMNVGKRRATVFGCFNSQNPGTQKMAAAIFGSGIKEELLEKAFGELQNPLVLGRVIGDVVDPFSPTIKMSVTFTNNKQVLNGHEFFPSSLSFKPRVHIQGEDMRPLFTLVMVDPDVPGPSDPYLREHLHWLVTDIPGTTDATFGKEEMSYEIPKPTIGIHRFVFILFKQKQRRSVVNPPSSRDRFNTRRFSCENDLGLPVAAVYFNAQRETAARRR* Homology
BLAST of CsaV3_6G040640 vs. NCBI nr
Match: KAE8647421.1 (hypothetical protein Csa_003291 [Cucumis sativus]) HSP 1 Score: 736.5 bits (1900), Expect = 1.1e-208 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. NCBI nr
Match: XP_004143382.1 (germin-like protein subfamily 3 member 2 [Cucumis sativus]) HSP 1 Score: 380.9 bits (977), Expect = 1.2e-101 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. NCBI nr
Match: XP_011657698.1 (CEN-like protein 2 [Cucumis sativus]) HSP 1 Score: 362.8 bits (930), Expect = 3.4e-96 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. NCBI nr
Match: XP_008462565.1 (PREDICTED: germin-like protein subfamily 3 member 2 [Cucumis melo]) HSP 1 Score: 358.6 bits (919), Expect = 6.3e-95 Identity = 184/193 (95.34%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. NCBI nr
Match: BAH28254.1 (TFL1-like protein [Cucumis sativus]) HSP 1 Score: 355.5 bits (911), Expect = 5.4e-94 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 8.7e-71 Identity = 118/172 (68.60%), Postives = 150/172 (87.21%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy Swiss-Prot
Match: Q9XH42 (CEN-like protein 4 OS=Nicotiana tabacum OX=4097 GN=CET4 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 2.5e-70 Identity = 117/172 (68.02%), Postives = 150/172 (87.21%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy Swiss-Prot
Match: O82088 (Protein SELF-PRUNING OS=Solanum lycopersicum OX=4081 GN=SP PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 9.6e-70 Identity = 117/168 (69.64%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy Swiss-Prot
Match: P93003 (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.4e-68 Identity = 120/168 (71.43%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy Swiss-Prot
Match: Q9ZNV5 (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana OX=3702 GN=CEN PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 4.0e-68 Identity = 118/169 (69.82%), Postives = 143/169 (84.62%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy TrEMBL
Match: A0A0A0KHH1 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G452110 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 5.8e-102 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy TrEMBL
Match: A0A0A0KFB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452100 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 1.6e-96 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy TrEMBL
Match: A0A1S3CIT4 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103500894 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95 Identity = 184/193 (95.34%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy TrEMBL
Match: B9ZYL1 (TFL1-like protein OS=Cucumis sativus OX=3659 GN=CsTFL1a PE=2 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 2.6e-94 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. ExPASy TrEMBL
Match: A0A1S3CHR2 (CEN-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500893 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92 Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 261.5 bits (667), Expect = 9.8e-70 Identity = 120/168 (71.43%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. TAIR 10
Match: AT2G27550.1 (centroradialis ) HSP 1 Score: 260.0 bits (663), Expect = 2.9e-69 Identity = 118/169 (69.82%), Postives = 143/169 (84.62%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. TAIR 10
Match: AT3G10080.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 240.4 bits (612), Expect = 2.3e-63 Identity = 117/184 (63.59%), Postives = 142/184 (77.17%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 224.9 bits (572), Expect = 1.0e-58 Identity = 104/168 (61.90%), Postives = 129/168 (76.79%), Query Frame = 0
BLAST of CsaV3_6G040640 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 196.4 bits (498), Expect = 3.9e-50 Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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