CsaV3_6G040610 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G040610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription initiation factor TFIID subunit 12
Location	chr6: 23514692 .. 23520942 (-)
RNA-Seq Expression	CsaV3_6G040610
Synteny	CsaV3_6G040610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGGATCCATCCATCCTTGGTTAAGGGTATTTTCGTAAAACTTAGAGGGCATTTTTTGAATGGTCTAATTTTCCATTTCTTTTAAAATCTAAAAAAATTGGGACTAAGCTGTAGTTGACGGGGGCAGAATTTTACCTTCGATTTCCACTTCAATGGATTCTTCATCACAGTCACCCTCCGAACCTCCCCCAGCTTCTTCTCCTCATCTACCTCCGACTTCAACAGCTCCATCCGCCACTAATCCCGTCACAGTTCCGCCGCAATCGTCCCCAAATGCGAACCCTAATATCAATCCGAGTTCGTTTCAAAATCAGAACCCCAATTCCAAGGCCTCAACTCCTCTGCCGAACCAGCCTCCACAACAGACACAATCTCTCCCTACTTCACAACAAATCACTAGGCCTTCCACCGCATTGTCTGCAACTTGGCAACCCCCTTCGCATTTCTCTCATTTTTCTTCTCCTTCCCCTTCTGCTTCATCTTCTGTTCCTTCACCGCGCCCTGTTTCTGCTTCTTCTCCAGCTCAAAGGAGCGGTGTTGCCATTGGGGTTCCAGCTCACCAGCCGACTCCCTCTCCTCAGCCTGCCCCGTTTTCTGCTTCTTATGGCCAGCACTTTGGTGGGTTGGGCCGTGGTGGCGTTAGCATATCGGACGGGGCTTCTAATTCAAATCCTTCTCAGGTGTGTTTTTCTCCAGCTTCTTACATATATAACCACCGTAGAAGTAGAGACTTGAAGAACTATAGCTATAGACATATAGCCTCTGTTGTTATACTGTACACTGCTAGTCTACTGGCATCTTTTTATTTGTATGATTTACAAACCTACATTTACTGATTGTTAAAGATAATGTCTTCTAAAGGAAGTAACAAGAGGGAGGGGGATAAAACAACAATTCAGTGACATCATCATCTATTTTGTTAAATATGAATGATTAGTTAATTAGTATTTGAGGTAAATTGGTTTGGAATTCAAGAACAAGGCATTCTTACAGAGATAAGAATAAGTTAATTATAGAATGCCAAAGCTAGTCTGAAGAATCAATGTCTCAGGATTTTCAGTTTAGGAGAAATACATTTAGAGTGGGGGAATGGGATACTATCCATTCTTGTGGCACCGTTAGCCTTTTGACGGGAAGATTACCAATTTGGTCCCTCCATCTAAATGGGAGATTTTCTGTTAAGTTTCCCGACTCTAGCTCTCGATAACAGCAACAACTGTTTCCCTTGTAATCCAATTTTGGATTGGCATCATATGGAGTGCCCTTTTTTGTCAATTCCATGCATCAATGTTTTTTTTTTTCTTATAAAAAAAGAAGAAGAAGAAAAGACATCATATGGAAAGCCAACGTGCCTAAGAAGGTTAAAGTTTTCCATTGGATATGCCTACCAGGAAAACTAACACTAATTATTTTATCCAAAGAAATCATCCAACGTCATGCCTAGTGTCCAGCTGGTATGTTATGTTATGTGTAAATAGAAAACCACAAGCATCTCTTTTTTCTTCGTGACATTGCTCGAGGCCTTTGCAGGAAGCTTTTTTCAGATTTTTGGTTTGAGTGGTGCATCCCAAACTCCATTAGTGAGGTTGTCACTCAATTGGGATATGGAACCGCTTTTCTTGAAAGGCTTTAGTTTTGTGGAATGAAGACAAATGCTTTCATGGGTAGTTAAGGAGGATTTGGTTGGAGAAAAATTAGAGGGTCTTCAAAGAGAAGTCCACGAGTCCAGAGGAGATTTGGGATTCTATTCAACTCTTTGCAGCTACATGGTGTTCAATTTCAAATTCTTTTTGTAATTATGACTTTGTGCAAACACTTTCCATTTGTACCTCCATTTTGTAGCCCTTTGGTCTTCAGGGGCATTCCTAATCTCCTTTAACAAGTTTTTCTTACTTTTTTGTTTTTTTCCCATTTTCATTATATGGCTCCTGTTTCTTAAAAAAATTATTTTACTTCAAATGTGCACATTTGGTTTTTTGGTTTAAAATATTGCCATTGAAGGATAAAAGTTAATTAAAAGAAGGAAAATTGCACTCCTCCTTGCTAACAAAGAACTGAATGTTGAATTAGTTTTCTGGTAAACTAATCTTACACTCGAGGTATGAGTAGATAAACAGAATTTATGACAAAAATTTCTTTTATTTCCTTTCCTTTTCTTTCCATCATCTCTGACCAGTGTTAAAAAATAACGATTAAGATGTCTTGGTATAAACTTTTTGTAGAATTTTATATGCTTATTTTATTGATTACATCATACTTGTCTGCTCATGGTTGGAATAATTGTTTGGAACACGTAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTAGGAATGTTGGGATCAAGTGGTTCTAGTTCTCAAATGTTGCATAGACCAGTGCAATCATCTCTCAGGCCGCCATCTACCCCAAACTCAGCCTCCCAAGTTAGTTACTGCTATCTAGCCAAACAATTGATTATTGATTATTAATATTTTGTTTGGATCCACACGTTTGGTGAAAGTGTAACAGCAATTAAATGCACACCTAAAATGTAGCTTAATCTATTTTGGGATGTTGTGGGTTGTCTCAGTCCACTATTATTTTATGCTCATTTCTTGATTTTTTAAGATCTTGGAAATCTTCACATTAGAAATTGTGATGGGCAGTTGCTTTTGCATGCCATAAACATCTCATGGCCAAGTTAGTTTTTTCATATTTTGTGAAAACAAACGGCAGTTGTTGAAGAGACTGGACAACATTTGGTTAGGTGAGGGATTATGTTGCATGTACTTTAGTTGGGAAAATGTCCTTTTTGTATCAATATGCATTTGGTGGTATATGTCTTAACTGTGTGTGAATCTTTTATATTCCAGTACTTGTTCCTACTACCTGTATCCAAGTGAATTGTCTACGGAGAAGGAGAACTTCATTTTATTGGACTTTACCTTTTTTGTACTAAAATTTGTTTATCTTTTTCAAAATTCAGAATTTCCAAGGCCATGGTCTCTTGAGAGTACCATCCACAAGTTCTCCAAGTTCTTCATTGCCAAACACATCACAAGGTATGCAACCCACCAACCAGCCATGGTTGCCATCTAGCTCACAAGGAAAACCTCCACTTCCAACACCTTCATATAGACCTCAGGCAAACTCACCTGCTATGCAGCAAAGGTCACATATCCCTCAACAGCAGAACCATCCCTTAACTCCAGTTTCTCAGCAGCAGCAAATTTCATCAGCTCCTCAACAACAACCTGCACAATCACATCAGCCGCAGGAGCATTTTGCACAACAATTTCAACAATCAAGGAGCTCGCAAGGCTTACCACATCAACAACAGGCTGCAAGAGCTCAGGGGCCAGCAAACCCAAAAGCTTCTCCTCTTGCACCTCCACAGACTAATAATGCACAGGCATTGACCCCAAGCAGAGCTATAACTGCAGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAATCAAGTTAGTTATTAGCTTGACTCGTTTAACTTTATCTATTTTCTTCTGAAATCAAAGATCATGCGAGTTAAACTAGGACCATTTGAGTTGTATGACTTGATTGAGACAGTTATTCTTATTATTTTAGCCCTTTATCCTATAAAAAATAAAGAAAAAAAATAGCACTTTATAGTTTATGGTTGAGTCTCCTACTGGTCATCTGCCCACCCCTTTTGTACCTTTATTTTGTTATTGTAGATATTGAACTTGACAAATGGTTGAATTTGGAAAACATAGATTATGGGTTACAAAAGTTGGTTCCAATAGTTGAACAGATGGGAGAGTCAACATATTGTACTTGAAGCTATGGGCAGATTCTAGACTCTTCACTTCTTACATATGTTGAAATGCTAATTTTAGAGTTTTGTCAAAGTTATCATTTGCTTACTGGCTACAAATTTGATCATATTTTTGCTCAATCTTCAATTTCTTCCTTTTCTTTTCTTGTCAAGTTGTCGCCGGCAACAACGATCTGAAGTTGGATATGCTATTAATTTATACTATGCAGATTCTATTTGCCTTTAAATTTGTTGGGTCTGAGGCCCTATATTTTACTTCTGCTTTATGGTTTTTTTTCTTTTGTGCAGATCGATCCATCTGAGAGATTGGATCCTGAAGTAGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAGTGAGTAGTTAAATTTAACTTTTTTCATGTTCATTTGAATATTTTGTCATTTCTCAATATTGTTTTTCTCATATCTTTTAGTTGGATTAGATTTTGATTCTTCACTCTTTAAAGTATCATTCACCCAATGAAGAAGTGAACTTGCTCTATAACAAAGGGGAACAAATAAGAATGGATGGATTGGAAATCTTTCTACAAAAGATTAATTGATGCTTGTAAAGTTTTCTTTGAAGGTTCTAATACCATACTAAGAAGTTCTTGTAAGGTCTAACCGAAAGATTTTGGTGCATATACTATAGATTTATATGTGCCTACAGATATGTTCCTAACCAAGTAACGTCCTTGTTGGTGTATGAGAATGATGGAACTTTACTTAGAGATGATTTTTAGGTACTTAAGCACCTTGGAGAACCACACCTCAAAAGCCAGCTTTTGGGTTGGGAGAGCCAAGCCACTTAAGCATCACATCGGTTATCACATTCTAGCCAATGTGAGACAAAAGGCATCCCATACTACCTTGGTTCCTAATATAATGGTGCAAGCTCTTGTTTGAGTTAGATGTACATTAGGATTTTTTTCAAGAGAGATGTATTCTTCCTTTTGTTGGGATAGCCTTTTTGGGCTAGTCTGAAAAATAGTGAATATTTGGAATTGTTCAATTTGGATTTTCTTGAACCATTTAGTTGTATTAAAATAATTTTTGAAGACCAGTGCCAAAATATTTATGCTGTTCTGGTTAGAGTTAGAATTGTTTAGATAAATGAGGTTTTAGATGGGGAAATCTTTCTGATATGTTTCCAATTATGATCATTAGCGTTGGCCAAAGTTGCTTATCAACGACTATCCTTTATTATTTTACTTTGTGTTTGTCTCATCTCATAGGTCTTGATTTAGTTCCGTGTAATGTGATTGTTTCACCTCATACTCAGATGATGGTAAGTTTATTTTGCTTTTCTTCTCACCTAGTTTGTTTAATTAATACTTATTTTGTGCAGATTACCACATTTGGTTGCTCATTAGCTAAGCATCGCAAATCAACTACATTGGAAGCGAAAGACATCCTTCTACATCTTGGTTGGTTATTTACAACAGCCAATATCTATGTTTAAGACTCGAACCTTATAGATATATTGTTTTCACATTATTGATTCTCTTCTCTTCTACTTCTACGCAGAAAAAAACTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGGTACATATATAATTGATGGCTATTATTTGTAGTAGCAACTGTGCATTAGAACTTTCTTCTTGTCAATGGTGGTCAAGCATTAAAGAATTTGAACTTTCTTTCCTCGCAGCTTACAAATGATACTCACAGAGAACGTGTTGCAGCAGTGAGTTCCCCTTCTATTATTAAGTCTTGGAACATGATGCAGGACCAAGAAAATGTTATGTTTCATTCAATGACGAATCCATTTTTCCCCCTGTTTTTCCCTGGCAGGTAAAAAAGTCTATTGTGGCAAGCGAGATGGCAAGTACCAGGAGTTCTGCTGGACAGGCCGCTGGAAATACCAAGAGCAGTCTAACAAAAACACCTGCAGTTTAGCATCTCCTGAAGTTCTAAATTTGGAGTCAAGAAGGTATGTAAATTGTGTCTATCACAAAAAGGTATCAGGAGATCTTATATGTATAACAGGAAGTGTCACGATTTTTTGACATTGAAAAATGGAAGATTGAGCCTTGGTCTCCATTTCATGTCTGTAAATGTAGAGAGGTTAATGGCTTGTTTGATACCTTTCATCTTTAATATGCCAAAATGAGTAAGGTTGGACAATTATTTTAACACTGTTCAGTCTACTCTCTAACCTTGAAAAGATAATTTTGTAAACCTGTACTTTTTCAACGAATTCTGTTTTGGTTTGAGAGTATGGTTGCTAATGGATCCAGAATTAGTTAGTCTCAACTTCAAAGGTTGCCAAGGAAGTAATGGTTGAGTAGTTAGTTAGTAGTAGTATATTCTTCCATTCACTTTTTTAGTACAGCTAGTGAGGAAAGTTATGACAATTACCTTGAGC

mRNA sequence

ATGGATTCTTCATCACAGTCACCCTCCGAACCTCCCCCAGCTTCTTCTCCTCATCTACCTCCGACTTCAACAGCTCCATCCGCCACTAATCCCGTCACAGTTCCGCCGCAATCGTCCCCAAATGCGAACCCTAATATCAATCCGAGTTCGTTTCAAAATCAGAACCCCAATTCCAAGGCCTCAACTCCTCTGCCGAACCAGCCTCCACAACAGACACAATCTCTCCCTACTTCACAACAAATCACTAGGCCTTCCACCGCATTGTCTGCAACTTGGCAACCCCCTTCGCATTTCTCTCATTTTTCTTCTCCTTCCCCTTCTGCTTCATCTTCTGTTCCTTCACCGCGCCCTGTTTCTGCTTCTTCTCCAGCTCAAAGGAGCGGTGTTGCCATTGGGGTTCCAGCTCACCAGCCGACTCCCTCTCCTCAGCCTGCCCCGTTTTCTGCTTCTTATGGCCAGCACTTTGGTGGGTTGGGCCGTGGTGGCGTTAGCATATCGGACGGGGCTTCTAATTCAAATCCTTCTCAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTAGGAATGTTGGGATCAAGTGGTTCTAGTTCTCAAATGTTGCATAGACCAGTGCAATCATCTCTCAGGCCGCCATCTACCCCAAACTCAGCCTCCCAAAATTTCCAAGGCCATGGTCTCTTGAGAGTACCATCCACAAGTTCTCCAAGTTCTTCATTGCCAAACACATCACAAGGTATGCAACCCACCAACCAGCCATGGTTGCCATCTAGCTCACAAGGAAAACCTCCACTTCCAACACCTTCATATAGACCTCAGGCAAACTCACCTGCTATGCAGCAAAGGTCACATATCCCTCAACAGCAGAACCATCCCTTAACTCCAGTTTCTCAGCAGCAGCAAATTTCATCAGCTCCTCAACAACAACCTGCACAATCACATCAGCCGCAGGAGCATTTTGCACAACAATTTCAACAATCAAGGAGCTCGCAAGGCTTACCACATCAACAACAGGCTGCAAGAGCTCAGGGGCCAGCAAACCCAAAAGCTTCTCCTCTTGCACCTCCACAGACTAATAATGCACAGGCATTGACCCCAAGCAGAGCTATAACTGCAGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAATCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTAGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACCACATTTGGTTGCTCATTAGCTAAGCATCGCAAATCAACTACATTGGAAGCGAAAGACATCCTTCTACATCTTGAAAAAAACTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTGTTGCAGCAGTAAAAAAGTCTATTGTGGCAAGCGAGATGGCAAGTACCAGGAGTTCTGCTGGACAGGCCGCTGGAAATACCAAGAGCAGTCTAACAAAAACACCTGCAGTTTAG

Coding sequence (CDS)

ATGGATTCTTCATCACAGTCACCCTCCGAACCTCCCCCAGCTTCTTCTCCTCATCTACCTCCGACTTCAACAGCTCCATCCGCCACTAATCCCGTCACAGTTCCGCCGCAATCGTCCCCAAATGCGAACCCTAATATCAATCCGAGTTCGTTTCAAAATCAGAACCCCAATTCCAAGGCCTCAACTCCTCTGCCGAACCAGCCTCCACAACAGACACAATCTCTCCCTACTTCACAACAAATCACTAGGCCTTCCACCGCATTGTCTGCAACTTGGCAACCCCCTTCGCATTTCTCTCATTTTTCTTCTCCTTCCCCTTCTGCTTCATCTTCTGTTCCTTCACCGCGCCCTGTTTCTGCTTCTTCTCCAGCTCAAAGGAGCGGTGTTGCCATTGGGGTTCCAGCTCACCAGCCGACTCCCTCTCCTCAGCCTGCCCCGTTTTCTGCTTCTTATGGCCAGCACTTTGGTGGGTTGGGCCGTGGTGGCGTTAGCATATCGGACGGGGCTTCTAATTCAAATCCTTCTCAGGTGAGACCTCCTATGCAAGGAATGCAGGGATTAGGAATGTTGGGATCAAGTGGTTCTAGTTCTCAAATGTTGCATAGACCAGTGCAATCATCTCTCAGGCCGCCATCTACCCCAAACTCAGCCTCCCAAAATTTCCAAGGCCATGGTCTCTTGAGAGTACCATCCACAAGTTCTCCAAGTTCTTCATTGCCAAACACATCACAAGGTATGCAACCCACCAACCAGCCATGGTTGCCATCTAGCTCACAAGGAAAACCTCCACTTCCAACACCTTCATATAGACCTCAGGCAAACTCACCTGCTATGCAGCAAAGGTCACATATCCCTCAACAGCAGAACCATCCCTTAACTCCAGTTTCTCAGCAGCAGCAAATTTCATCAGCTCCTCAACAACAACCTGCACAATCACATCAGCCGCAGGAGCATTTTGCACAACAATTTCAACAATCAAGGAGCTCGCAAGGCTTACCACATCAACAACAGGCTGCAAGAGCTCAGGGGCCAGCAAACCCAAAAGCTTCTCCTCTTGCACCTCCACAGACTAATAATGCACAGGCATTGACCCCAAGCAGAGCTATAACTGCAGAAATGGAAGAACCCTGTAGTAGAATTCTCAGCAAAAGAAGTATTGGCAAATTGGTTAATCAAATCGATCCATCTGAGAGATTGGATCCTGAAGTAGAAGATATACTCGTTGATCTGGCAGAAGAGTTTGTTGAGTCAATTACCACATTTGGTTGCTCATTAGCTAAGCATCGCAAATCAACTACATTGGAAGCGAAAGACATCCTTCTACATCTTGAAAAAAACTGGAATCTAACACTTCCTGGGTTTGGTAGTGACGAGATTAAGATATTCAGAAAACCGCTTACAAATGATACTCACAGAGAACGTGTTGCAGCAGTAAAAAAGTCTATTGTGGCAAGCGAGATGGCAAGTACCAGGAGTTCTGCTGGACAGGCCGCTGGAAATACCAAGAGCAGTCTAACAAAAACACCTGCAGTTTAG

Protein sequence

MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKASTPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSASSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPPMQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKKSIVASEMASTRSSAGQAAGNTKSSLTKTPAV*

Homology

[Close]

BLAST of CsaV3_6G040610 vs. NCBI nr
Match: XP_011657695.1 (transcription initiation factor TFIID subunit 12 [Cucumis sativus] >KGN48255.1 hypothetical protein Csa_002821 [Cucumis sativus])

HSP 1 Score: 940.3 bits (2429), Expect = 7.2e-270
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA
Sbjct: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP
Sbjct: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. NCBI nr
Match: KAA0025267.1 (transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 880.9 bits (2275), Expect = 5.2e-252
Identity = 484/511 (94.72%), Postives = 489/511 (95.69%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSP LPP ST  SATN V VPPQSSP ANP++NPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQITRPSTALS TWQPPSHFSHFSS SPS SS VPSPRPVSA
Sbjct: 61  STPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR GVAIGVPAHQP+PSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRP 
Sbjct: 121 SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPS 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS AMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPL P QTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QA  PSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QASAPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. NCBI nr
Match: TYK07401.1 (transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 869.8 bits (2246), Expect = 1.2e-248
Identity = 481/511 (94.13%), Postives = 486/511 (95.11%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSP LPP ST  SATN V VPPQSSP ANP++NPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQITRPSTALS TWQPPSHFSHFSS SPS SS VPSPRPVSA
Sbjct: 61  STPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR GVAIGVPAHQP+PSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRP 
Sbjct: 121 SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPS 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS AMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPL P QTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QA  PSRAITAEMEEPCSRILSKRSIGKL   IDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QASAPSRAITAEMEEPCSRILSKRSIGKL---IDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 508

[Close]

BLAST of CsaV3_6G040610 vs. NCBI nr
Match: XP_038883059.1 (transcription initiation factor TFIID subunit 12 [Benincasa hispida])

HSP 1 Score: 863.2 bits (2229), Expect = 1.1e-246
Identity = 471/511 (92.17%), Postives = 482/511 (94.32%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSPH+PP ST PSAT  V VPPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPHIPPASTVPSATTSVVVPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLP SQQI+RPS +LS TWQPPSHFSHFSSPSPSASSSVP+PRPVSA
Sbjct: 61  STPLPNQPSQQQQSLPPSQQISRPSASLSGTWQPPSHFSHFSSPSPSASSSVPTPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR GVAIGVPAHQP+PSPQPAPFSASYGQHFGGLGRGGVSISDG SN NPSQVRPP
Sbjct: 121 SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGPSNVNPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSS QML RPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSPQMLQRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQP+NQPWLPSSSQGKPPLPTPSYRPQ NSPAMQQRSHIPQQQNHPLTP  QQQQ
Sbjct: 241 NTSQGMQPSNQPWLPSSSQGKPPLPTPSYRPQVNSPAMQQRSHIPQQQNHPLTPAPQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPA SHQPQEHFAQQFQ SRS QGLPHQQQAARAQGPAN K SPLAP QTNN 
Sbjct: 301 ISSAPQQQPAHSHQPQEHFAQQFQSSRSPQGLPHQQQAARAQGPANQKPSPLAPSQTNNT 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           Q +T SRAITAE EEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QTMTQSRAITAETEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMA+TR+SAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMANTRNSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. NCBI nr
Match: XP_022926039.1 (transcription initiation factor TFIID subunit 12 [Cucurbita moschata])

HSP 1 Score: 838.2 bits (2164), Expect = 3.8e-239
Identity = 457/511 (89.43%), Postives = 477/511 (93.35%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSPH PP +T  SAT  V  PPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQ+TRPSTALS TWQPPSHFSHFSSPSPSASS VPSPRPV+A
Sbjct: 61  STPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVAA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR G+AIGVPAHQPTPSPQPA FSASYGQHFGGLGRGGVS+S+ ASN+ PSQVRPP
Sbjct: 121 SSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVSMSEPASNATPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSS M  RPVQSSLR PSTPNS +QNFQGHGLLRVPS SSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQP+NQPWLPS+SQGKPPLPTPSYRPQANSPA+QQRSHIPQQQNHPLTP SQQQQ
Sbjct: 241 NTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLTPASQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISS PQQQPAQSHQ QEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPLAP QT+N 
Sbjct: 301 ISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTSNT 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           Q ++ SRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESITT
Sbjct: 361 QTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWN+TLPGF SDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSL KTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot
Match: Q9SR71 (Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702 GN=TAF12 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 9.9e-97
Identity = 267/541 (49.35%), Postives = 327/541 (60.44%), Query Frame = 0


Query: 3   SSSQSPSEPP------PASSPHLPPT-STAPSATNPVTVPPQSSPNANPNINPSSFQNQN 62
           ++SQ P  PP      P++   + PT ST PS ++ V+  P S    +P++NP      N
Sbjct: 9   TASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSPAPQSPSLNP------N 68

Query: 63  PNSKAST-PLPNQPPQQTQSLPTSQQITR-PSTALSATWQPPSHFSHFSSPSPSASSSVP 122
           PN    T P+ +   QQ Q L  SQ + R P  A S  WQ  S ++HFSS S    SS  
Sbjct: 69  PNPPQYTRPVTSPATQQQQHL--SQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 128

Query: 123 SPRPVSASSP---AQRSGVAIGVPAHQPTPSPQPAP-------FSASYGQHFGGLGRGGV 182
           +P   S+S P    QR G+AIGVPA  P PSP P P       F  S+GQ +GGLGRG V
Sbjct: 129 APASSSSSLPISGQQRGGMAIGVPA-SPIPSPSPTPSQHSPSAFPGSFGQQYGGLGRGTV 188

Query: 183 SISDGASNSNPSQVRPPMQGMQGLGMLGSSGSSSQM--------LHRPVQSSLRP---PS 242
            +S+  SN++  QVR  MQG QG+GM+G+ GS SQ+          RP QSSLRP    S
Sbjct: 189 GMSEATSNTSSPQVR-MMQGTQGIGMMGTLGSGSQIRPSGMTQHQQRPTQSSLRPASSTS 248

Query: 243 TPNSASQNFQGHGLLRVPSTSSPS-SSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRP 302
           T +  +QNFQGH L+R    SSP+  S   + Q +Q  NQPWL S+ QGKPPLP PSYRP
Sbjct: 249 TQSPVAQNFQGHSLMRPSPISSPNVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPSYRP 308

Query: 303 QANSPAMQQRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSRS-SQ 362
           Q NSP+MQQR HIPQQ       +S         QQQ  Q HQPQE    Q QQ RS  Q
Sbjct: 309 QVNSPSMQQRPHIPQQH------ISTSAATPQPQQQQSQQQHQPQE----QLQQLRSPQQ 368

Query: 363 GLPHQQQAARAQGPANPK-ASPLAPPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKL 422
            L H  Q  R QG  N K  SP+ P Q   AQ    ++ ++AE E    RIL KRSI +L
Sbjct: 369 PLAHPHQPTRVQGLVNQKVTSPVMPSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHEL 428

Query: 423 VNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNL 482
           + QIDPSE+LDPEVEDIL D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+
Sbjct: 429 LQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNI 488

Query: 483 TLPGFGSDEIKIFRKPLTNDTHRERVAAVKKSIVASEMASTRSSAGQAAGNTKSSLTKTP 511
             PGF SDE K FRKPLT D H+ER+AA+KKS+ A+E A+ R+  G    N +    KTP
Sbjct: 489 RPPGFSSDEFKTFRKPLTTDIHKERLAAIKKSVTATEAANARNQFGHGTANARGGQAKTP 529

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot
Match: Q3T174 (Transcription initiation factor TFIID subunit 12 OS=Bos taurus OX=9913 GN=TAF12 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-26
Identity = 48/104 (46.15%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 378 SRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK 437
           +++L+K+ +  LV ++DP+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKS+TLE K
Sbjct: 55  NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114

Query: 438 DILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKKS 482
           D+ LHLE+ WN+ +PGFGS+EI+ ++K  T + H++R+A ++K+
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKT 158

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot
Match: Q16514 (Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF12 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-26
Identity = 48/104 (46.15%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 378 SRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAK 437
           +++L+K+ +  LV ++DP+E+LD +VE++L+ +A++F+ES+ T  C LA+HRKS+TLE K
Sbjct: 55  NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114

Query: 438 DILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKKS 482
           D+ LHLE+ WN+ +PGFGS+EI+ ++K  T + H++R+A ++K+
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKT 158

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot
Match: Q8VE65 (Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf12 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-26
Identity = 53/133 (39.85%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 354 PPQTNNAQALTPSR-----AITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILV 413
           PPQ + A + T  +          +    +++L+K+ +  LV ++DP+E+LD +VE++L+
Sbjct: 26  PPQGSMANSTTVGKIAGTPGTGGRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLL 85

Query: 414 DLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTN 473
            +A++F+ES+ T  C LA+HRKS+TLE KD+ LHLE+ WN+ +PGFGS+EI+ ++K  T 
Sbjct: 86  QIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTT 145

Query: 474 DTHRERVAAVKKS 482
           + H++R+A ++K+
Sbjct: 146 EAHKQRMALIRKT 158

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot
Match: Q91858 (Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=taf12 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.5e-25
Identity = 61/158 (38.61%), Postives = 99/158 (62.66%), Query Frame = 0


Query: 326 SRSSQGLPHQQQAARAQGPANPKASPL--APPQTNNAQALTPSRAITAEMEEPCSRILSK 385
           S SS   P     A  Q PA   ++P+   P  T      +P            +++LSK
Sbjct: 14  SFSSSTTPSPTSVAVKQEPAMANSTPVGKVPVPTAGGGRASPE----------ANQVLSK 73

Query: 386 RSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHL 445
           + +  LV ++DP+E+LD +VE++L+ +A++F+ES+ +  C LA+HRKS TLE KD+ LHL
Sbjct: 74  KKLHDLVREVDPNEQLDEDVEEMLLQIADDFIESVVSAACQLARHRKSNTLEVKDVQLHL 133

Query: 446 EKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKKS 482
           E+ WN+ +PGFGS+EI+ ++K  T + H++R+A +KK+
Sbjct: 134 ERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIKKT 161

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL
Match: A0A0A0KEX0 (TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452070 PE=3 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 3.5e-270
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA
Sbjct: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP
Sbjct: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL
Match: A0A5A7SKM4 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001190 PE=3 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 2.5e-252
Identity = 484/511 (94.72%), Postives = 489/511 (95.69%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSP LPP ST  SATN V VPPQSSP ANP++NPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQITRPSTALS TWQPPSHFSHFSS SPS SS VPSPRPVSA
Sbjct: 61  STPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR GVAIGVPAHQP+PSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRP 
Sbjct: 121 SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPS 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS AMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPL P QTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QA  PSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QASAPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL
Match: A0A5D3C687 (Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001250 PE=3 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 5.8e-249
Identity = 481/511 (94.13%), Postives = 486/511 (95.11%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSP LPP ST  SATN V VPPQSSP ANP++NPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPQLPPASTVSSATNSVAVPPQSSPKANPSVNPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQITRPSTALS TWQPPSHFSHFSS SPS SS VPSPRPVSA
Sbjct: 61  STPLPNQPSQQIQSLPTSQQITRPSTALSGTWQPPSHFSHFSSSSPSVSSGVPSPRPVSA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR GVAIGVPAHQP+PSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRP 
Sbjct: 121 SSPAQRGGVAIGVPAHQPSPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPS 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQ+FQGHGLLRVPSTSSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQSFQGHGLLRVPSTSSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANS AMQQRSHIPQQQNHPLTPVSQQQQ
Sbjct: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSHIPQQQNHPLTPVSQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISSAPQQQPAQSHQPQEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPL P QTNNA
Sbjct: 301 ISSAPQQQPAQSHQPQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLPPAQTNNA 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           QA  PSRAITAEMEEPCSRILSKRSIGKL   IDPSERLDPEVEDILVDLAEEFVESITT
Sbjct: 361 QASAPSRAITAEMEEPCSRILSKRSIGKL---IDPSERLDPEVEDILVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSLTKTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 508

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL
Match: A0A6J1EDW5 (transcription initiation factor TFIID subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111433276 PE=3 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 1.9e-239
Identity = 457/511 (89.43%), Postives = 477/511 (93.35%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSPH PP +T  SAT  V  PPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STPLPNQP QQ QSLPTSQQ+TRPSTALS TWQPPSHFSHFSSPSPSASS VPSPRPV+A
Sbjct: 61  STPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVAA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR G+AIGVPAHQPTPSPQPA FSASYGQHFGGLGRGGVS+S+ ASN+ PSQVRPP
Sbjct: 121 SSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVSMSEPASNATPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSS M  RPVQSSLR PSTPNS +QNFQGHGLLRVPS SSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQP+NQPWLPS+SQGKPPLPTPSYRPQANSPA+QQRSHIPQQQNHPLTP SQQQQ
Sbjct: 241 NTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLTPASQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISS PQQQPAQSHQ QEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPLAP QT+N 
Sbjct: 301 ISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTSNT 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           Q ++ SRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESITT
Sbjct: 361 QTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWN+TLPGF SDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSL KTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL
Match: A0A6J1IPW3 (transcription initiation factor TFIID subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111478377 PE=3 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 6.0e-238
Identity = 455/511 (89.04%), Postives = 475/511 (92.95%), Query Frame = 0


Query: 1   MDSSSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKA 60
           MDSSSQSPSEPP ASSPH PP +T  SAT  V  PPQSSPNANPNINPSSFQNQNPNSKA
Sbjct: 1   MDSSSQSPSEPPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSKA 60

Query: 61  STPLPNQPPQQTQSLPTSQQITRPSTALSATWQPPSHFSHFSSPSPSASSSVPSPRPVSA 120
           STP PNQP QQ QSLPTSQQ+TRPSTALS TWQPPSHFSHFSSPSPSASS VPSPRPV+A
Sbjct: 61  STPQPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVAA 120

Query: 121 SSPAQRSGVAIGVPAHQPTPSPQPAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP 180
           SSPAQR G+AIGVPAHQPTPSPQPA FSASYGQHFGGLGRGGVS+S+ ASN+ PSQVRPP
Sbjct: 121 SSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVSMSEPASNATPSQVRPP 180

Query: 181 MQGMQGLGMLGSSGSSSQMLHRPVQSSLRPPSTPNSASQNFQGHGLLRVPSTSSPSSSLP 240
           MQGMQGLGMLGSSGSSS M  RPVQSSLR PSTPNS +QNFQGHGLLRVPS SSPSSSLP
Sbjct: 181 MQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSSLP 240

Query: 241 NTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNHPLTPVSQQQQ 300
           NTSQGMQP+NQPWLPS+SQGKPPLPTPSYRPQANSPA+QQRSHIPQQQNHPL P SQQQQ
Sbjct: 241 NTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLPPASQQQQ 300

Query: 301 ISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKASPLAPPQTNNA 360
           ISS PQQQPAQSHQ QEHFAQQFQ SRSSQGLPHQQQAARAQGPANPKASPLAP QT+N 
Sbjct: 301 ISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTSNT 360

Query: 361 QALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVDLAEEFVESITT 420
           Q ++ SRA++AE EEPCSRILSKRSIG+LVNQIDPSERLDPEVED+LVDLAEEFVESITT
Sbjct: 361 QPMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESITT 420

Query: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGSDEIKIFRKPLTNDTHRERVAAVKK 480
           FGCSLAKHRKSTTLEAKDILLHLEKNWN+TLPGF SDEIKIFRKPLTNDTHRER+AAVKK
Sbjct: 421 FGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAVKK 480

Query: 481 SIVASEMASTRSSAGQAAGNTKSSLTKTPAV 512
           SIVASEMASTRSSAGQAAGNTKSSL KTPAV
Sbjct: 481 SIVASEMASTRSSAGQAAGNTKSSLAKTPAV 511

[Close]

BLAST of CsaV3_6G040610 vs. TAIR 10
Match: AT3G10070.1 (TBP-associated factor 12 )

HSP 1 Score: 355.5 bits (911), Expect = 7.0e-98
Identity = 267/541 (49.35%), Postives = 327/541 (60.44%), Query Frame = 0


Query: 3   SSSQSPSEPP------PASSPHLPPT-STAPSATNPVTVPPQSSPNANPNINPSSFQNQN 62
           ++SQ P  PP      P++   + PT ST PS ++ V+  P S    +P++NP      N
Sbjct: 9   TASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSPAPQSPSLNP------N 68

Query: 63  PNSKAST-PLPNQPPQQTQSLPTSQQITR-PSTALSATWQPPSHFSHFSSPSPSASSSVP 122
           PN    T P+ +   QQ Q L  SQ + R P  A S  WQ  S ++HFSS S    SS  
Sbjct: 69  PNPPQYTRPVTSPATQQQQHL--SQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 128

Query: 123 SPRPVSASSP---AQRSGVAIGVPAHQPTPSPQPAP-------FSASYGQHFGGLGRGGV 182
           +P   S+S P    QR G+AIGVPA  P PSP P P       F  S+GQ +GGLGRG V
Sbjct: 129 APASSSSSLPISGQQRGGMAIGVPA-SPIPSPSPTPSQHSPSAFPGSFGQQYGGLGRGTV 188

Query: 183 SISDGASNSNPSQVRPPMQGMQGLGMLGSSGSSSQM--------LHRPVQSSLRP---PS 242
            +S+  SN++  QVR  MQG QG+GM+G+ GS SQ+          RP QSSLRP    S
Sbjct: 189 GMSEATSNTSSPQVR-MMQGTQGIGMMGTLGSGSQIRPSGMTQHQQRPTQSSLRPASSTS 248

Query: 243 TPNSASQNFQGHGLLRVPSTSSPS-SSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRP 302
           T +  +QNFQGH L+R    SSP+  S   + Q +Q  NQPWL S+ QGKPPLP PSYRP
Sbjct: 249 TQSPVAQNFQGHSLMRPSPISSPNVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPSYRP 308

Query: 303 QANSPAMQQRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSRS-SQ 362
           Q NSP+MQQR HIPQQ       +S         QQQ  Q HQPQE    Q QQ RS  Q
Sbjct: 309 QVNSPSMQQRPHIPQQH------ISTSAATPQPQQQQSQQQHQPQE----QLQQLRSPQQ 368

Query: 363 GLPHQQQAARAQGPANPK-ASPLAPPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKL 422
            L H  Q  R QG  N K  SP+ P Q   AQ    ++ ++AE E    RIL KRSI +L
Sbjct: 369 PLAHPHQPTRVQGLVNQKVTSPVMPSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHEL 428

Query: 423 VNQIDPSERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNL 482
           + QIDPSE+LDPEVEDIL D+AE+FVESITTFGCSLAKHRKS  LEAKDILLH+E+NWN+
Sbjct: 429 LQQIDPSEKLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNI 488

Query: 483 TLPGFGSDEIKIFRKPLTNDTHRERVAAVKKSIVASEMASTRSSAGQAAGNTKSSLTKTP 511
             PGF SDE K FRKPLT D H+ER+AA+KKS+ A+E A+ R+  G    N +    KTP
Sbjct: 489 RPPGFSSDEFKTFRKPLTTDIHKERLAAIKKSVTATEAANARNQFGHGTANARGGQAKTP 529

[Close]

BLAST of CsaV3_6G040610 vs. TAIR 10
Match: AT1G17440.1 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-16
Identity = 162/578 (28.03%), Postives = 245/578 (42.39%), Query Frame = 0


Query: 4   SSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKASTP 63
           SS +P+   P     +P  S     ++ +    Q+             Q Q     +S+P
Sbjct: 77  SSPNPTSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQLVQQTQQLPQQQQQIMQQISSSP 136

Query: 64  LPNQPPQQTQSLP----TSQQITRPSTALSATWQPPSHFSHFSSPSP------------- 123
           +P   PQQ Q L     TSQQI   S  ++ + Q     S  S                 
Sbjct: 137 IPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNV 196

Query: 124 --------------SASSSVPSPRPVSASSPAQRSGVAIGVPAHQP---------TPSPQ 183
                          + S   S +     +P       +G   H P           + Q
Sbjct: 197 LRQQAGLYGTMNFGGSGSVQQSQQNQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQ 256

Query: 184 PAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPPMQGMQGLGMLGSSGSSSQMLHRP 243
           P   +AS  Q   G+ +G        S  +P      +QGMQ +GM+GS   +SQM   P
Sbjct: 257 PQLLAASPRQK-SGMVQG--------SQFHPGSSGQQLQGMQAMGMMGSLNLTSQMRGNP 316

Query: 244 ---VQSSLRPPSTPNSASQ-----NFQGHGLLRVPSTSSPSSSLPNTSQGMQP------- 303
               Q  + P       SQ     + Q   L R  S +  +  L   +Q  Q        
Sbjct: 317 ALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSL 376

Query: 304 TNQPWL---------------PSSSQGKPPLPTPSYRPQANSPAMQQRS-HIPQQQNHPL 363
           + Q WL               PS  Q          + Q +SP + Q S  + QQQ   +
Sbjct: 377 SQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQI 436

Query: 364 TPVSQQQQISSAPQQQPAQSH--------------QPQEHFAQQFQQSRSSQGLPHQQQA 423
             + QQQQ S   Q Q  QSH              QPQ+   QQ QQ +  Q +  QQ +
Sbjct: 437 --IQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQ-INQQQPS 496

Query: 424 ARAQGPANPKASPL--APPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPS 483
            R    A  K+  L  + P+   +   TP  + +++  E  +++L KR I  LV+Q+D  
Sbjct: 497 PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGS-SSQGTEATNQLLGKRKIQDLVSQVDVH 556

Query: 484 ERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGS 495
            +LDP+VED+L+++A++F++S+T+F CSLAKHRKS+ LE KDILLHLEKN +LT+PGF S
Sbjct: 557 AKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSS 616

[Close]

BLAST of CsaV3_6G040610 vs. TAIR 10
Match: AT1G17440.2 (Transcription initiation factor TFIID subunit A )

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-16
Identity = 162/578 (28.03%), Postives = 245/578 (42.39%), Query Frame = 0


Query: 4   SSQSPSEPPPASSPHLPPTSTAPSATNPVTVPPQSSPNANPNINPSSFQNQNPNSKASTP 63
           SS +P+   P     +P  S     ++ +    Q+             Q Q     +S+P
Sbjct: 77  SSPNPTSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQLVQQTQQLPQQQQQIMQQISSSP 136

Query: 64  LPNQPPQQTQSLP----TSQQITRPSTALSATWQPPSHFSHFSSPSP------------- 123
           +P   PQQ Q L     TSQQI   S  ++ + Q     S  S                 
Sbjct: 137 IPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNV 196

Query: 124 --------------SASSSVPSPRPVSASSPAQRSGVAIGVPAHQP---------TPSPQ 183
                          + S   S +     +P       +G   H P           + Q
Sbjct: 197 LRQQAGLYGTMNFGGSGSVQQSQQNQQMVNPNMSRAGLVGQSGHLPMLNGAAGAAQMNIQ 256

Query: 184 PAPFSASYGQHFGGLGRGGVSISDGASNSNPSQVRPPMQGMQGLGMLGSSGSSSQMLHRP 243
           P   +AS  Q   G+ +G        S  +P      +QGMQ +GM+GS   +SQM   P
Sbjct: 257 PQLLAASPRQK-SGMVQG--------SQFHPGSSGQQLQGMQAMGMMGSLNLTSQMRGNP 316

Query: 244 ---VQSSLRPPSTPNSASQ-----NFQGHGLLRVPSTSSPSSSLPNTSQGMQP------- 303
               Q  + P       SQ     + Q   L R  S +  +  L   +Q  Q        
Sbjct: 317 ALYAQQRINPGQMRQQLSQQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNGQAGMMQNSL 376

Query: 304 TNQPWL---------------PSSSQGKPPLPTPSYRPQANSPAMQQRS-HIPQQQNHPL 363
           + Q WL               PS  Q          + Q +SP + Q S  + QQQ   +
Sbjct: 377 SQQQWLKQMSGITSPNSFRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQI 436

Query: 364 TPVSQQQQISSAPQQQPAQSH--------------QPQEHFAQQFQQSRSSQGLPHQQQA 423
             + QQQQ S   Q Q  QSH              QPQ+   QQ QQ +  Q +  QQ +
Sbjct: 437 --IQQQQQQSQLGQSQMNQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQMQ-INQQQPS 496

Query: 424 ARAQGPANPKASPL--APPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPS 483
            R    A  K+  L  + P+   +   TP  + +++  E  +++L KR I  LV+Q+D  
Sbjct: 497 PRMLSHAGQKSVSLTGSQPEATQSGTTTPGGS-SSQGTEATNQLLGKRKIQDLVSQVDVH 556

Query: 484 ERLDPEVEDILVDLAEEFVESITTFGCSLAKHRKSTTLEAKDILLHLEKNWNLTLPGFGS 495
            +LDP+VED+L+++A++F++S+T+F CSLAKHRKS+ LE KDILLHLEKN +LT+PGF S
Sbjct: 557 AKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSS 616

The following BLAST results are available for this feature:

BLAST of CsaV3_6G040610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657695.1	7.2e-270	100.00	transcription initiation factor TFIID subunit 12 [Cucumis sativus] >KGN48255.1 h...	[more]
KAA0025267.1	5.2e-252	94.72	transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]	[more]
TYK07401.1	1.2e-248	94.13	transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]	[more]
XP_038883059.1	1.1e-246	92.17	transcription initiation factor TFIID subunit 12 [Benincasa hispida]	[more]
XP_022926039.1	3.8e-239	89.43	transcription initiation factor TFIID subunit 12 [Cucurbita moschata]	[more]

BLAST of CsaV3_6G040610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR71	9.9e-97	49.35	Transcription initiation factor TFIID subunit 12 OS=Arabidopsis thaliana OX=3702...	[more]
Q3T174	1.8e-26	46.15	Transcription initiation factor TFIID subunit 12 OS=Bos taurus OX=9913 GN=TAF12 ...	[more]
Q16514	1.8e-26	46.15	Transcription initiation factor TFIID subunit 12 OS=Homo sapiens OX=9606 GN=TAF1...	[more]
Q8VE65	4.1e-26	39.85	Transcription initiation factor TFIID subunit 12 OS=Mus musculus OX=10090 GN=Taf...	[more]
Q91858	4.5e-25	38.61	Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis OX=8355 GN=ta...	[more]

BLAST of CsaV3_6G040610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEX0	3.5e-270	100.00	TFIID_20kDa domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452070...	[more]
A0A5A7SKM4	2.5e-252	94.72	Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=...	[more]
A0A5D3C687	5.8e-249	94.13	Transcription initiation factor TFIID subunit 12 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1EDW5	1.9e-239	89.43	transcription initiation factor TFIID subunit 12 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IPW3	6.0e-238	89.04	transcription initiation factor TFIID subunit 12 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CsaV3_6G040610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10070.1	7.0e-98	49.35	TBP-associated factor 12	[more]
AT1G17440.1	1.4e-16	28.03	Transcription initiation factor TFIID subunit A	[more]
AT1G17440.2	1.4e-16	28.03	Transcription initiation factor TFIID subunit A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003228	Transcription initiation factor TFIID subunit 12 domain	PFAM	PF03847	TFIID_20kDa	coord: 382..449 e-value: 1.3E-29 score: 102.5
IPR003228	Transcription initiation factor TFIID subunit 12 domain	CDD	cd07981	TAF12	coord: 381..449 e-value: 4.04655E-35 score: 123.755
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 377..450 e-value: 2.0E-32 score: 113.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 379..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..362
None	No IPR available	PANTHER	PTHR12264:SF21	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	coord: 1..504
IPR037794	Transcription initiation factor TFIID subunit 12	PANTHER	PTHR12264	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	coord: 1..504

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G040610.1	CsaV3_6G040610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0046695	SLIK (SAGA-like) complex
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity