CsaV3_6G040480 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G040480
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 23440429 .. 23440806 (+)
RNA-Seq ExpressionCsaV3_6G040480
SyntenyCsaV3_6G040480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTCTGTAATATTATATCTATTTTCACTTAATTCAAGCTGTGATTTTATGATCTTATTTTGATTATTGTGATATATGTTTTGAGCAATTCGAAGGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

mRNA sequence

ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

Coding sequence (CDS)

ATGGGTTTTAAGCTCACCAGCCTTGTTGTAAGGAGGGCATGCATGGCTTATGGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCAGTAATTGTCCTACGGCGCTATGCGTGGTGTTGTAAGATAGAAGAGATTATTATTCACGAAAATGATGTGGCACCATCTCCGAGTGTCACGGTACTCTAA

Protein sequence

MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSRSAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL*
Homology
[Close]
BLAST of CsaV3_6G040480 vs. NCBI nr
Match: KGN48241.1 (hypothetical protein Csa_003826 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 2.4e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 95
          SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

[Close]
BLAST of CsaV3_6G040480 vs. ExPASy TrEMBL
Match: A0A0A0KKF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G450950 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 95
          SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

The following BLAST results are available for this feature:
BLAST of CsaV3_6G040480 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48241.12.4e-46100.00hypothetical protein Csa_003826 [Cucumis sativus][more]
BLAST of CsaV3_6G040480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G040480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKF01.2e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G450950 PE=4 SV=1[more]
BLAST of CsaV3_6G040480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G040480.1CsaV3_6G040480.1mRNA