CsaV3_6G040320 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G040320
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	homeobox-leucine zipper protein ATHB-22-like
Location	chr6: 23270808 .. 23273299 (-)
RNA-Seq Expression	CsaV3_6G040320
Synteny	CsaV3_6G040320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATATCTATATCTATATATCTATATCTATATATATAAGTGTGTGTGTGTGTTTATATATAGAGAGATAGATAGATAGATATTGATGTTGTTTGTGGTCCATTTGGTTTGAACAAAACAGAGAGGTTGTTGTGAGAAAAGAAATCCATATTCCAAATACATATGGAATGGAATAATGGAAATATAAGTTTTAGTTCTAACTTTGTTTCTCCACCACCACAATCTTCTTCTTCCTCTGCATTGCTTTACAACTACAGCTTCAACTGCAACTACAATTTGGATCACTTTCCTGGTAAACCAGACTCATAAAATGAAACTTACCTTTTACTGTTCAATGTGTATGTATTGTTTGTTCTTTTTTTCTTTTTTTTCTTTTAGACACCACTTTTTGATGGATCATTAAACCTAAACCTTCTCCCTAGAAACCCTATTTTGTCAAAATTTTGCCAAATAGGGTTTTAGGGTTTTGGGTTTGTTTTCTCTTTTTCTCTAAACATTACTCTATCTATGGGGGGCTTGTGGAGAGGTATTAGCATTCCAGACAGGAGTTTGAACGCAAAATTTGTTTTCCTCTTAAATACGTTTTCAAATCACAACGAATTCAACTCATAATGAAAATTTTTGGTTTGATTCGATATCCATTTTGGTTTTCCTTTTTTTTTGAAGTTATGTATTGTCACTAATTTGTGGTGGTATGCTATTCACATTCTGAAAAGCATATCTTAATTCTAAACCAAATTGCAAAAAAGAAAAAAAAACAAAAACAAACAAATTCAAGTTTTTAATACCTTGTTTGATAACTTTTGGATTTTATGATTTCTTTGCAATATTTTTTTATGTAAAATTTGAACTGTAAACCTAATTTAAAATATGAAAGTATATTTTTTGGTTAATTTTTTCATTTACTTACAAAGATCGTCATCTATTTTCTCATAATCTCATTTGAATTCTTACCCAAATTTCAAAACAAAAACAAACTTTTAAAAACTATTTCTTTTTATGTTTCAAAGGGAAAATATTGTTAGAGCGAGATAACAAAACCAAAGAATCATATAGCTAGAGCTAGGCAGGAGTTATATTTAGCTTAACAAACTAATTAAGCAAAGAATGCATGCATGTACAAAACTAATAAAATGGTTATATTAGAGACTGATTGATATTCTCAACCTTCTTCTATCCAACCAGTAGTAGAGACAACGACACCGGTAGCAACCGGGGAAGGCGAGCAAAACATGGCTGGAGCTGGAGTGGATCATCAAAAGAAGAAGAGGTTGAGTCAAGATCAGTTGGAGGCATTGGAGAGAAGCTTTCAAGAAGAAGTAAAGCTTGATCCTGATAGAAAAATGAAGCTTTCAAAGGAACTTGGGCTTCAACCAAGGCAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGTTGGAAGACTAAGCAACTTGAGCATCTCTATGATACTCTCAAGCAACAATTTGATACTATCTCTAAGGAAAAACACAACCTTCAACAAGAGGTCTCTCTCTCTCTAATCTTTTCATTGTTAAGTTGTCAGAAATAGACTGTAAAAGTGACTTAGAAATGCATGGACACTTTATTAGTAACAAATAAGATAATGTTTCCAAGTGTTTAAGAAACTTGTTCTAAATAGACTGTATAAACTATATCATTGAGTTGGCATTAATTAGCACATCAATTATATATAAATCATTATCACTAAAATAGCTTAATCATATTCTTTGACATAAAATCATGCAAAAACATCCCACCATAAAGCCTTAAAAGTATTGTGTTTATAAACAATGACCTAAAAAACATCTTGAGAAAGGAAAGGATATTATACCCTTCAATGACATTATAGAAAATATGGATGGGTTACGTTAATACATTAAATTGAGATTATTATGTGGCCCTGAACATCTTAATCATATAAATGAAAGATAGTACTCATGTAATTCCTCGACTCTTTTCGATATCTCCAACTGGCTATAGTTCATCCCTTTGAAAGTTTGGTTTTTTTCAATAATAGTGGTTGATTTAATGTGATATCAGGAAAAAAAAAAAGAAGTCCTTTGTTAACTTAAGCTTTTGGATTGGCAGGACAGGTGATGAAATTAAGAAGCATGCTAAGAGAACAGACAACGAGGAACCAAGGGTCGATGGCTCACACGGACGTCTCTGGGGAAGAGACGACGGTGGAGTGCACGTCGGTGGAGATTCTGAGCTGTAACAATTACATGTACAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTGCTCACTTGCCTTCTTATCCTTAGGCTTCTCATGGGGTACTTAAATTTTAATTATTAGTTTGGGTTTAGAAATTTGCATCAACTTTTTTACTCTCTTAATTATGATGTGATATGATCTAGAGAAGACATATATAGTTTGATTTTATGTGTGTTTGAATATTCTTGGTCACCCATATAAAATTAACTTCACTTCCAAG

mRNA sequence

ATGGAATGGAATAATGGAAATATAAGTTTTAGTTCTAACTTTGTTTCTCCACCACCACAATCTTCTTCTTCCTCTGCATTGCTTTACAACTACAGCTTCAACTGCAACTACAATTTGGATCACTTTCCTGTAGTAGAGACAACGACACCGGTAGCAACCGGGGAAGGCGAGCAAAACATGGCTGGAGCTGGAGTGGATCATCAAAAGAAGAAGAGGTTGAGTCAAGATCAGTTGGAGGCATTGGAGAGAAGCTTTCAAGAAGAAGTAAAGCTTGATCCTGATAGAAAAATGAAGCTTTCAAAGGAACTTGGGCTTCAACCAAGGCAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGTTGGAAGACTAAGCAACTTGAGCATCTCTATGATACTCTCAAGCAACAATTTGATACTATCTCTAAGGAAAAACACAACCTTCAACAAGAGGTGATGAAATTAAGAAGCATGCTAAGAGAACAGACAACGAGGAACCAAGGGTCGATGGCTCACACGGACGTCTCTGGGGAAGAGACGACGGTGGAGTGCACGTCGGTGGAGATTCTGAGCTGTAACAATTACATGTACAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTGCTCACTTGCCTTCTTATCCTTAG

Coding sequence (CDS)

ATGGAATGGAATAATGGAAATATAAGTTTTAGTTCTAACTTTGTTTCTCCACCACCACAATCTTCTTCTTCCTCTGCATTGCTTTACAACTACAGCTTCAACTGCAACTACAATTTGGATCACTTTCCTGTAGTAGAGACAACGACACCGGTAGCAACCGGGGAAGGCGAGCAAAACATGGCTGGAGCTGGAGTGGATCATCAAAAGAAGAAGAGGTTGAGTCAAGATCAGTTGGAGGCATTGGAGAGAAGCTTTCAAGAAGAAGTAAAGCTTGATCCTGATAGAAAAATGAAGCTTTCAAAGGAACTTGGGCTTCAACCAAGGCAAATAGCTGTGTGGTTTCAAAATAGAAGAGCTCGTTGGAAGACTAAGCAACTTGAGCATCTCTATGATACTCTCAAGCAACAATTTGATACTATCTCTAAGGAAAAACACAACCTTCAACAAGAGGTGATGAAATTAAGAAGCATGCTAAGAGAACAGACAACGAGGAACCAAGGGTCGATGGCTCACACGGACGTCTCTGGGGAAGAGACGACGGTGGAGTGCACGTCGGTGGAGATTCTGAGCTGTAACAATTACATGTACAATGTGGAAGATTTCAACCAAATATCAGCTTCAGCTCCTCCATTCTGGTGGGGTGCTGAGGCTGCTCACTTGCCTTCTTATCCTTAG

Protein sequence

MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP*

Homology

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BLAST of CsaV3_6G040320 vs. NCBI nr
Match: XP_004143373.2 (homeobox-leucine zipper protein ATHB-22 isoform X1 [Cucumis sativus] >KGN48225.1 hypothetical protein Csa_003985 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM
Sbjct: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60

Query: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120
           AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR
Sbjct: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120

Query: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180
           WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT
Sbjct: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180

Query: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 225
           VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP
Sbjct: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 224

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BLAST of CsaV3_6G040320 vs. NCBI nr
Match: XP_031742621.1 (homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFP VETTTPVATGEGEQNM
Sbjct: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFP-VETTTPVATGEGEQNM 60

Query: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120
           AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR
Sbjct: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120

Query: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180
           WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT
Sbjct: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180

Query: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 225
           VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP
Sbjct: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 223

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BLAST of CsaV3_6G040320 vs. NCBI nr
Match: XP_008462523.1 (PREDICTED: homeobox-leucine zipper protein ATHB-22-like [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 211/224 (94.20%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNGNISFSSNFVS  PQSSSSSALLYNY+FNC+YNLDHFPV+ET T VATGEG+QNM
Sbjct: 1   MEWNNGNISFSSNFVSQLPQSSSSSALLYNYNFNCSYNLDHFPVIETATRVATGEGKQNM 60

Query: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120
           AG GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLS ELGLQPRQIAVWFQNRRAR
Sbjct: 61  AG-GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMELGLQPRQIAVWFQNRRAR 120

Query: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180
           WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLR+MLREQTTRN GSMAHTD+SGEETT
Sbjct: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTTRNAGSMAHTDISGEETT 180

Query: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 225
           VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP
Sbjct: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 223

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BLAST of CsaV3_6G040320 vs. NCBI nr
Match: XP_031742623.1 (putative homeobox-leucine zipper protein ATHB-51 isoform X4 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 44  VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 103
           VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL
Sbjct: 5   VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 64

Query: 104 GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 163
           GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT
Sbjct: 65  GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 124

Query: 164 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 223
           RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY
Sbjct: 125 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 184

Query: 224 P 225
           P
Sbjct: 185 P 185

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BLAST of CsaV3_6G040320 vs. NCBI nr
Match: XP_031742622.1 (putative homeobox-leucine zipper protein ATHB-51 isoform X3 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 2.3e-95
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 44  VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 103
           +VETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL
Sbjct: 2   LVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 61

Query: 104 GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 163
           GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT
Sbjct: 62  GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 121

Query: 164 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 223
           RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY
Sbjct: 122 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 181

Query: 224 P 225
           P
Sbjct: 182 P 182

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BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot
Match: Q9LZR0 (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702 GN=ATHB-51 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35
Identity = 96/197 (48.73%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 1   MEWN-NGNI-SFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQ 60
           MEW+   N+ +    F+ PP   SSS   L++++F+      + P    T PV +    +
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESE 60

Query: 61  NMAGA------GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAV 120
            +  A        +  KKKRL+  QL +LERSFQEE+KLD DRK+KLS+ELGLQPRQIAV
Sbjct: 61  KIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAV 120

Query: 121 WFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQ-TTRNQGSMAH 180
           WFQNRRARWK KQLE LYD+L+Q++D +S+EK  L  EV KLR++LR+Q   + Q S   
Sbjct: 121 WFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGT 180

Query: 181 TDVSGEETTVECTSVEI 189
             VSGEE TVE +SV +
Sbjct: 181 IKVSGEEDTVEISSVVV 197

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BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot
Match: Q4PSR7 (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 71/121 (58.68%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 51  VATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEV--------KLDPDRKMKLSKE 110
           V +G GE++ +  G   +KKK+++ +QL+ LERSFQEE+        KL+PDRKMKLSKE
Sbjct: 54  VESGYGEESNSFNG-QEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKE 113

Query: 111 LGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQT 164
           LGLQPRQIAVWFQNR+ARWK KQLEHLY++L+Q+FD +S+EK  LQ+E+++L+SM+RE +
Sbjct: 114 LGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDS 173

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BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 68  QKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLE 127
           +KK+RL+ +Q+  LERSF+EE KL+P+RK +L+++LGLQPRQ+AVWFQNRRARWKTKQLE
Sbjct: 78  EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLE 137

Query: 128 HLYDTLKQQFDTIS-------KEKHNLQQEVMKLRSMLREQTTRNQGSM-AHTDVSG 177
             +D LK  FD +        ++ H L  +VM L   L+E+ T  +GS  A  DV G
Sbjct: 138 RDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPG 194

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BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 68  QKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLE 127
           +KK+RL+ +Q+  LERSF+EE KL+P+RK +L+++LGLQPRQ+AVWFQNRRARWKTKQLE
Sbjct: 76  EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLE 135

Query: 128 HLYDTLKQQFDTIS-------KEKHNLQQEVMKLRSMLREQTTRNQGSM-AHTDVSG 177
             +D LK  FD +        ++ H L  +VM L   L+E+ T  +GS  A  DV G
Sbjct: 136 RDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPG 192

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot
Match: Q8LC03 (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-23
Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFV-------SPPPQSSSSSALLYNYSFNCNYN-----LDHFPVVETT 60
           M  NNG   F SNF+         P QS S + LL + S   + +     L     +E  
Sbjct: 1   MSCNNGMSFFPSNFMIQTSYEDDHPHQSPSLAPLLPSCSLPQDLHGFASFLGKRSPMEGC 60

Query: 61  TPVATG---EGEQNMAGAGVD-HQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELG 120
             + TG    GE++ +  G    +KK+RL+ +Q++ LE++F+   KL+P+RKM+L++ LG
Sbjct: 61  CDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120

Query: 121 LQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTR 180
           LQPRQIA+WFQNRRARWKTKQLE  YDTLK+QFDT+  E   LQ    KL++ +     R
Sbjct: 121 LQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR 180

Query: 181 NQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPP 211
            Q    + +   +ET   C++    S +N   ++       ++APP
Sbjct: 181 EQTESINLN---KETEGSCSNRSDNSSDNLRLDI-------STAPP 216

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL
Match: A0A0A0KET9 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449320 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.2e-123
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM
Sbjct: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60

Query: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120
           AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR
Sbjct: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120

Query: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180
           WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT
Sbjct: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180

Query: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 225
           VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP
Sbjct: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 224

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL
Match: A0A1S3CIQ6 (homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo OX=3656 GN=LOC103500861 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.3e-114
Identity = 211/224 (94.20%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNGNISFSSNFVS  PQSSSSSALLYNY+FNC+YNLDHFPV+ET T VATGEG+QNM
Sbjct: 1   MEWNNGNISFSSNFVSQLPQSSSSSALLYNYNFNCSYNLDHFPVIETATRVATGEGKQNM 60

Query: 61  AGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRAR 120
           AG GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLS ELGLQPRQIAVWFQNRRAR
Sbjct: 61  AG-GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMELGLQPRQIAVWFQNRRAR 120

Query: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 180
           WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLR+MLREQTTRN GSMAHTD+SGEETT
Sbjct: 121 WKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTTRNAGSMAHTDISGEETT 180

Query: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 225
           VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP
Sbjct: 181 VECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSYP 223

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL
Match: A0A5A7SJ21 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001530 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.1e-90
Identity = 172/181 (95.03%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 44  VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 103
           V+ET T VATGEG+QNMAG GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLS EL
Sbjct: 19  VIETATRVATGEGKQNMAG-GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMEL 78

Query: 104 GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 163
           GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLR+MLREQTT
Sbjct: 79  GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTT 138

Query: 164 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 223
           RN GSMAHTD+SGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY
Sbjct: 139 RNAGSMAHTDISGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 198

Query: 224 P 225
           P
Sbjct: 199 P 198

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL
Match: A0A5D3CAN1 (Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00890 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 44  VVETTTPVATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKEL 103
           V+ET T VATGEG+QNMAG GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLS EL
Sbjct: 19  VIETATRVATGEGKQNMAG-GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSMEL 78

Query: 104 GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTT 163
           GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLR+MLREQTT
Sbjct: 79  GLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRNMLREQTT 138

Query: 164 RNQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPPFWWGAEAAHLPSY 223
           RN GSMAHTD+SGEETTVECTSVEILSCNNYMYNVEDF+QISASAPPFWWGAEAAHLPSY
Sbjct: 139 RNAGSMAHTDISGEETTVECTSVEILSCNNYMYNVEDFDQISASAPPFWWGAEAAHLPSY 198

Query: 224 P 225
           P
Sbjct: 199 P 198

[Close]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL
Match: A0A6J1IJF1 (putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita maxima OX=3661 GN=LOC111477634 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.4e-66
Identity = 149/227 (65.64%), Postives = 167/227 (73.57%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQNM 60
           MEWNNG++        P P +S      YNY +N NYNLD FPV+E   P      E   
Sbjct: 1   MEWNNGSL-------IPSPYTS------YNYYYNYNYNLDEFPVLEAKKP------EVES 60

Query: 61  AGAGVDHQKKK-RLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRA 120
              GVD +KKK RLSQDQLE+LER FQE+  LDPD KMKLSKELGLQPRQIAVWFQNRRA
Sbjct: 61  VVGGVDEKKKKNRLSQDQLESLERCFQEDGMLDPDTKMKLSKELGLQPRQIAVWFQNRRA 120

Query: 121 RWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHTDVSGEET 180
           RW+TKQLE+LY TLKQ+FDTISKEKH LQQEV+KLRSML EQT  N+  MA+ D SG E 
Sbjct: 121 RWRTKQLEYLYHTLKQEFDTISKEKHTLQQEVLKLRSMLGEQTMSNEEPMAYEDASG-EA 180

Query: 181 TVECTSVEIL-SCNNYMY-NVEDFNQISASAPPFWWGAEAAHLPSYP 225
           TVE TSV ++ SCNNY + NVED  +IS S PPFWWGAEAAHLPSYP
Sbjct: 181 TVESTSVGVIGSCNNYTHNNVEDLVKISGSGPPFWWGAEAAHLPSYP 207

[Close]

BLAST of CsaV3_6G040320 vs. TAIR 10
Match: AT5G03790.1 (homeobox 51 )

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 96/197 (48.73%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 1   MEWN-NGNI-SFSSNFVSPPPQSSSSSALLYNYSFNCNYNLDHFPVVETTTPVATGEGEQ 60
           MEW+   N+ +    F+ PP   SSS   L++++F+      + P    T PV +    +
Sbjct: 1   MEWSTTSNVENVRVAFMPPPWPESSSFNSLHSFNFDPYAGNSYTPGDTQTGPVISVPESE 60

Query: 61  NMAGA------GVDHQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAV 120
            +  A        +  KKKRL+  QL +LERSFQEE+KLD DRK+KLS+ELGLQPRQIAV
Sbjct: 61  KIMNAYRFPNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAV 120

Query: 121 WFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQ-TTRNQGSMAH 180
           WFQNRRARWK KQLE LYD+L+Q++D +S+EK  L  EV KLR++LR+Q   + Q S   
Sbjct: 121 WFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGT 180

Query: 181 TDVSGEETTVECTSVEI 189
             VSGEE TVE +SV +
Sbjct: 181 IKVSGEEDTVEISSVVV 197

[Close]

BLAST of CsaV3_6G040320 vs. TAIR 10
Match: AT2G36610.1 (homeobox protein 22 )

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-32
Identity = 71/121 (58.68%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 51  VATGEGEQNMAGAGVDHQKKKRLSQDQLEALERSFQEEV--------KLDPDRKMKLSKE 110
           V +G GE++ +  G   +KKK+++ +QL+ LERSFQEE+        KL+PDRKMKLSKE
Sbjct: 54  VESGYGEESNSFNG-QEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKE 113

Query: 111 LGLQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQT 164
           LGLQPRQIAVWFQNR+ARWK KQLEHLY++L+Q+FD +S+EK  LQ+E+++L+SM+RE +
Sbjct: 114 LGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDS 173

[Close]

BLAST of CsaV3_6G040320 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-24
Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 0


Query: 1   MEWNNGNISFSSNFV-------SPPPQSSSSSALLYNYSFNCNYN-----LDHFPVVETT 60
           M  NNG   F SNF+         P QS S + LL + S   + +     L     +E  
Sbjct: 1   MSCNNGMSFFPSNFMIQTSYEDDHPHQSPSLAPLLPSCSLPQDLHGFASFLGKRSPMEGC 60

Query: 61  TPVATG---EGEQNMAGAGVD-HQKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELG 120
             + TG    GE++ +  G    +KK+RL+ +Q++ LE++F+   KL+P+RKM+L++ LG
Sbjct: 61  CDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120

Query: 121 LQPRQIAVWFQNRRARWKTKQLEHLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTR 180
           LQPRQIA+WFQNRRARWKTKQLE  YDTLK+QFDT+  E   LQ    KL++ +     R
Sbjct: 121 LQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR 180

Query: 181 NQGSMAHTDVSGEETTVECTSVEILSCNNYMYNVEDFNQISASAPP 211
            Q    + +   +ET   C++    S +N   ++       ++APP
Sbjct: 181 EQTESINLN---KETEGSCSNRSDNSSDNLRLDI-------STAPP 216

[Close]

BLAST of CsaV3_6G040320 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 60/127 (47.24%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 68  QKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLE 127
           +KK+RLS +Q++ALE++F+ E KL+P+RK+KL++ELGLQPRQ+AVWFQNRRARWKTKQLE
Sbjct: 61  EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 120

Query: 128 H-------LYDTLKQQFDTISKEKHNLQQEVMKLRSML------REQTTRNQGSMAHTDV 182
                    YD+L+  FD++ ++  +L QE+ KL++ L       E+   N      +D+
Sbjct: 121 KDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDI 180

[Close]

BLAST of CsaV3_6G040320 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-23
Identity = 65/145 (44.83%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 68  QKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLE 127
           +KKKRL+ +Q+ ALE+SF+   KL+P+RKM+L+K LGLQPRQIA+WFQNRRARWKTKQLE
Sbjct: 114 EKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLE 173

Query: 128 HLYDTLKQQFDTISKEK-----HN--LQQEVMKLRSMLREQTTRNQGSMAHTDVSGEETT 187
             YD+LK+QFD +  +      HN  L  E++ L+   R+++ + +   A    S   +T
Sbjct: 174 RDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKREFAEASWSNNGST 233

Query: 188 VECTSVEILSCNNYMYNVEDFNQIS 206
                      NN+  N  D N +S
Sbjct: 234 E----------NNHNNNSSDANHVS 248

The following BLAST results are available for this feature:

BLAST of CsaV3_6G040320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143373.2	1.3e-122	100.00	homeobox-leucine zipper protein ATHB-22 isoform X1 [Cucumis sativus] >KGN48225.1...	[more]
XP_031742621.1	1.2e-120	99.55	homeobox-leucine zipper protein ATHB-22 isoform X2 [Cucumis sativus]	[more]
XP_008462523.1	1.1e-113	94.20	PREDICTED: homeobox-leucine zipper protein ATHB-22-like [Cucumis melo]	[more]
XP_031742623.1	1.0e-95	100.00	putative homeobox-leucine zipper protein ATHB-51 isoform X4 [Cucumis sativus]	[more]
XP_031742622.1	2.3e-95	99.45	putative homeobox-leucine zipper protein ATHB-51 isoform X3 [Cucumis sativus]	[more]

BLAST of CsaV3_6G040320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZR0	2.8e-35	48.73	Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana OX=3702...	[more]
Q4PSR7	1.2e-30	58.68	Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2X980	2.4e-23	52.14	Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6YWR4	2.4e-23	52.14	Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8LC03	4.2e-23	37.61	Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]

BLAST of CsaV3_6G040320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KET9	6.2e-123	100.00	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449320 PE...	[more]
A0A1S3CIQ6	5.3e-114	94.20	homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A5A7SJ21	4.1e-90	95.03	Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3CAN1	1.6e-89	94.48	Homeobox-leucine zipper protein ATHB-22-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1IJF1	2.4e-66	65.64	putative homeobox-leucine zipper protein ATHB-51 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CsaV3_6G040320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03790.1	2.0e-36	48.73	homeobox 51	[more]
AT2G36610.1	8.6e-32	58.68	homeobox protein 22	[more]
AT1G69780.1	2.9e-24	37.61	Homeobox-leucine zipper protein family	[more]
AT2G22430.1	1.9e-23	47.24	homeobox protein 6	[more]
AT5G15150.1	2.5e-23	44.83	homeobox 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..164
None	No IPR available	GENE3D	1.10.10.60		coord: 63..130 e-value: 1.1E-21 score: 78.0
None	No IPR available	PANTHER	PTHR24326:SF593	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 15..191
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 15..191
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 95..104 score: 37.96 coord: 104..120 score: 55.68
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 67..128 e-value: 1.2E-18 score: 77.9
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 69..122 e-value: 2.2E-17 score: 62.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 64..124 score: 17.280809
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 68..125 e-value: 3.3606E-18 score: 73.4316
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 124..158 e-value: 8.7E-9 score: 35.4
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 99..122
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 65..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G040320.1	CsaV3_6G040320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding