CsaV3_6G039080 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCAGATTAGAGATACTAAGTCCCAAACAAATTAAGAGATCAGACTTCGAAGGATTTGGTGATTGTTGATATTCAATTCGAAGAACAAATTAAATTGTTCGTAGAACAAATTTTTTTCTTTGTGTTTTCTTCTTGGAGAATTATATCAAGGTCGCTGAGTATGGCAAGAGACAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCCGTAGGAGGAGCCGTCGGTAAGAAAAACCCTAAATTTTCTTTGAAGAAGTTCATTTCTATTATCTGTCGTCTTCTTATTCCTAATCCGGTTTTCCTTTTCTTTTTCGAGTTCTGAGTTCCCGGTTATGGTTTGATTGTTGTTTCGACCATCGGTGATTGAGTAGTTATGTGTGTGAGATGTGTTGGATTAGAGAGTTTTACATGAGCAGGAAGCTGGATATTTTGGTCAATTTGTGTTATTGCATCTTTGATTGAATCATGTTTGTTTCTCAGTGATAATGTACTACTAAGAATTATACCGCTATGTAACCTTCAGTACCCTTTCGAATTTTTTTCATTTGTATAAATTAAGGCTTTGTTTGTTTGATCATATCACTTGATTGTGGACTTCATTTTGCCCATGTTAATGATTAATTTTGACGTACTTTGGTAGGTTTGGTTAAGTATGGAGTCAACTAATCTCATGTTATGTACTCAAAACATAAATTGACCGGAACTTGTGTTAAAGCATGTAGCTTAGCGATTATCGTTTACGATCCATCTTCCATCCCAAAATGTATTGACTACTTGATGCTCAAAGCTGCAATCTTAAATTGCCAGAGTATAGTTTTTCAAGAAGCTTGTTATTTGATTTAATCTATGACTGTCGAGCATTATGAACTACCTAGTGCTACCATCTTGATGCTATACATCGGTCAAAGTTCTATATATATATATATATATATATTTTCCTGCCCCCCCGAGAGTTTCTTTCCATGCTTTCATCCGAATTTTTAAGTATGTGGTATGTGTTGGCTGAGGATTCTATAACTAACAGGTTTGTCTTTCTTTTTCTAGGTGCTGTATATGGAACTTATGAGGCCATTAGATTTAAGGTATACTATCTCTGATAAATTCAACAACGGCTCTCTAACTCTATTATGATGATCTAAAGTTTTTCATCAAACTATCATGAATAGTTAATCTGTTTCCAGTCAGCTAGTGTCTTATCTAAACATCTTGAAACTAATATGAGATTCCGGCACTGCCTCATTAGGAATTCTATTGTCATAGGATCAAAATTCGCACTCAACAAACTTTGAAGTGAAAAATAAAATACTACAGATTTTGGCCTTGTTGAAACAAATTTCATAATCTTTTCTCATAAATTTTTATATTCTTCTTCCTGTTATCCTAAATTAATTGGAGGAGAGGAAAACTCATAGATTATAGGGAACTATTCGTATTCCTAAATATTGCTACATTTGTTTCAATTATTCATTCTTATTATGTTAAATTTCAGTCTTAAAAGCCCAAAGATGGGAATGAATTATACCTAATTTTCAACAGTTTGTGATGATGATAGATGGGAATGAATTATTGAGTAAAGTTGGATTTGTTGATGCAGGTGCCAGGACTATTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATATTAGTTTAAGTTAGAGCAGTTGGTCATTTGTTTATTTAAAGGCTTCCATTTGTGGTTGTTGGTTGAATGAAAGAAACAAAGTGGTCAATTGATGGTGATAGGGCTTCACCCCCTATTTAGATGTCATGAAATATTGATTCTTATTTCGAGATTTTTATTTTATGGATATATGGAGTCATCTTCTTTTAAATTGAAAAATTCATCAAAGTTGTTTTGATTCTTGACCTAATATTTTTCAGGATAGATGTTTCTTTCATTTTCAAGCTCAAGAGAATGAAGAAAAAATATTCAAAG ATGGCAAGAGACAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCCGTAGGAGGAGCCGTCGGTGCTGTATATGGAACTTATGAGGCCATTAGATTTAAGGTGCCAGGACTATTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATATTAG ATGGCAAGAGACAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCCGTAGGAGGAGCCGTCGGTGCTGTATATGGAACTTATGAGGCCATTAGATTTAAGGTGCCAGGACTATTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGGGGCAGGGAGTTTGATACATTGTGGAAAGTCATATTAG MARDSCLARVTAGVAVGGAVGGAVGAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLGAGSLIHCGKSY* Homology
BLAST of CsaV3_6G039080 vs. NCBI nr
Match: XP_004140202.2 (reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED: reactive oxygen species modulator 1 [Cucumis melo] >XP_022152962.1 reactive oxygen species modulator 1 [Momordica charantia] >XP_022943286.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita moschata] >XP_022986427.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita maxima] >XP_023511835.1 reactive oxygen species modulator 1 [Cucurbita pepo subsp. pepo] >XP_038900697.1 reactive oxygen species modulator 1 [Benincasa hispida] >KAG6570413.1 Reactive oxygen species modulator 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010289.1 Reactive oxygen species modulator 1 [Cucurbita argyrosperma subsp. argyrosperma] >KGN48107.1 hypothetical protein Csa_003706 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. NCBI nr
Match: XP_023876465.1 (reactive oxygen species modulator 1 [Quercus suber] >KAF3969773.1 hypothetical protein CMV_006468 [Castanea mollissima]) HSP 1 Score: 144.4 bits (363), Expect = 3.9e-31 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. NCBI nr
Match: XP_006362315.1 (PREDICTED: reactive oxygen species modulator 1-like [Solanum tuberosum] >XP_015057079.1 reactive oxygen species modulator 1-like [Solanum pennellii] >KAG5577609.1 hypothetical protein H5410_057743 [Solanum commersonii]) HSP 1 Score: 144.4 bits (363), Expect = 3.9e-31 Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. NCBI nr
Match: XP_012455136.1 (PREDICTED: reactive oxygen species modulator 1-like isoform X2 [Gossypium raimondii] >XP_016699771.1 reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_016728217.1 reactive oxygen species modulator 1-like [Gossypium hirsutum] >XP_017649162.1 PREDICTED: reactive oxygen species modulator 1-like [Gossypium arboreum] >XP_028074600.1 reactive oxygen species modulator 1 [Camellia sinensis] >XP_039067227.1 reactive oxygen species modulator 1-like [Hibiscus syriacus] >KAB2010113.1 hypothetical protein ES319_D10G214000v1 [Gossypium barbadense] >KAG8480758.1 hypothetical protein CXB51_025442 [Gossypium anomalum] >TYG51104.1 hypothetical protein ES288_D10G230000v1 [Gossypium darwinii] >TYH50818.1 hypothetical protein ES332_D10G231400v1 [Gossypium tomentosum] >TYI62052.1 hypothetical protein E1A91_D10G217800v1 [Gossypium mustelinum]) HSP 1 Score: 144.1 bits (362), Expect = 5.0e-31 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. NCBI nr
Match: XP_002279769.1 (PREDICTED: reactive oxygen species modulator 1 [Vitis vinifera] >XP_034688326.1 reactive oxygen species modulator 1 [Vitis riparia] >CBI24226.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 143.7 bits (361), Expect = 6.6e-31 Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy Swiss-Prot
Match: A4QNF3 (Reactive oxygen species modulator 1 OS=Xenopus tropicalis OX=8364 GN=romo1 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 4.9e-05 Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy Swiss-Prot
Match: Q6NYD1 (Reactive oxygen species modulator 1 OS=Danio rerio OX=7955 GN=romo1 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04 Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy Swiss-Prot
Match: Q4V7T9 (Reactive oxygen species modulator 1 OS=Xenopus laevis OX=8355 GN=romo1 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04 Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy Swiss-Prot
Match: Q3SZV8 (Reactive oxygen species modulator 1 OS=Bos taurus OX=9913 GN=ROMO1 PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04 Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy Swiss-Prot
Match: P60602 (Reactive oxygen species modulator 1 OS=Homo sapiens OX=9606 GN=ROMO1 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04 Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy TrEMBL
Match: A0A6J1J7H7 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484176 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy TrEMBL
Match: A0A0A0KIA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432800 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy TrEMBL
Match: A0A6J1DHP0 (reactive oxygen species modulator 1 OS=Momordica charantia OX=3673 GN=LOC111020576 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy TrEMBL
Match: A0A6J1FRB8 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448103 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. ExPASy TrEMBL
Match: A0A1S3BLX4 (reactive oxygen species modulator 1 OS=Cucumis melo OX=3656 GN=LOC103491480 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_6G039080 vs. TAIR 10
Match: AT3G07910.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 128.3 bits (321), Expect = 2.7e-30 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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