CsaV3_6G038830 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038830
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein N-lysine methyltransferase METTL21A
Location	chr6: 22262187 .. 22263773 (+)
RNA-Seq Expression	CsaV3_6G038830
Synteny	CsaV3_6G038830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATAGGTTGTTTGTACAGGAAATGTTGCACTTTTTGTCTCTAAGGAACCTTGACAGTTATTAAGCTTTCAACAATCAAGTGTACCTTTGCTTTTCAAAACGGCTGAGCGGCTCCTCCAAGTAAGAGGAAGAGGAAAATGCAAATTCATTCTAGCATATGTATCCCGAGCTAGGAGGTGAGTTGCTCTTTGGCTTTGTGCTATTATTATCATTTTATGTTTCCAGTATCTGAAGAAACCTCTCAACTTTTTACTTTGTTGACAAAGTTAGAAATAGGAATATTCTGTTCCTTTACCATTTTACTGAATAATCTCTCTGCATCTATATAGAATTTGTCTGTTTTGTGATAAAGACCACAACATAAATTGATATGGATTTCCAGAAGGTTCTCTAGACAGTAAGAACCTTAGAAATTTAGTCAAGGACCATAGGATGTCATTCTCCAAAGTATAACATCAAAATTTAGCTTAGGCTTCATAATTCCTTCCTCTTCTACCCTTCTGTATTTCTTCTCATCTTCCTGGTTTTGTGTTTGGAATGAGCACCTTTCATTTCACGACTTCGGCCCATTTGTTTCTTAAAAATTAATTCTATTTGCTTTCATTTTAACAATTATTTGCATATTTATTATGTGAAAGACTTAAATCCTTCGCCAAATTCCAAATTCCAAAAACAATCGGTAAGGGTGGAATTGATATTTATAGGCTAAATTTTTTTAAAAAACAGAAACGAGCCTCTTTATTAATGATAATAAATGAGATCAATGCTCAAATCAAAGTAAAAGTAATATACTAAGAGAAAAAGGAGAAAAAGTACTAAAAGGACAATCAAAATGACAACACAAACAAGCCAAAATCCTCTATAACTCAAACAAAAATGGAGAAATAACTACCAAGCAAAATATTACTTTTTTAATGAGAAGCCACAAAATCGATCTTGAGCCCGAGAAGACTTGCTAACAATTTTCAAACCAACAAATTGTGAAATAACATTAAATTCTTTGACAAGAGGAAACCATTCTTGCACACAACAAGAAATAATGAAGCAAACAACCAACTCACTAAACTGCCAGAAACAAAATTTTGAAGCAGGAACAAAAAGAAATCTACTTTCAAGTACTCAGCCAAAAAATTATCCTACATTCTTTAACAAAAAACTTCAAATGTTTTGGAACTTCACAAACATGAGGATTCTGCTATTTGTAAGCTTAATTCTCAAAAACTAAAAACTAAATGGTTACAAAACAAGATCTCAACAATTTTCACCTTTTTTCTCGTGTATCATTGGTATTCCATGGATTTTGAGCAATTTTTCTTTAGTGATACAATCAATAAGAGGAAACCACTATCACAAATGCATGTTTGTTTAGTGATACAATCAATAAGAGGAGACTCTACTACTACTACAAATGCTAGTTTGTGTTCTATTTACTAAAAGTTGTTTCTCATGCATTTACTTTATAGCATGGATACACTGATACTTGATGAAGCTTCTCGGCATGGGATGCGAATGATTGAAGTAGATGGAACACGATCTGTGGTTGGGAATCTTCAAGGAGTCATCTATGAGATTACCCTTAATTAG

mRNA sequence

ATGTTATTAAGCTTTCAACAATCAAGTGTACCTTTGCTTTTCAAAACGGCTGAGCGGCTCCTCCAAGTAAGAGGAAGAGGAAAATGCAAATTCATTCTAGCATATGTATCCCGAGCTAGGAGCATGGATACACTGATACTTGATGAAGCTTCTCGGCATGGGATGCGAATGATTGAAGTAGATGGAACACGATCTGTGGTTGGGAATCTTCAAGGAGTCATCTATGAGATTACCCTTAATTAG

Coding sequence (CDS)

ATGTTATTAAGCTTTCAACAATCAAGTGTACCTTTGCTTTTCAAAACGGCTGAGCGGCTCCTCCAAGTAAGAGGAAGAGGAAAATGCAAATTCATTCTAGCATATGTATCCCGAGCTAGGAGCATGGATACACTGATACTTGATGAAGCTTCTCGGCATGGGATGCGAATGATTGAAGTAGATGGAACACGATCTGTGGTTGGGAATCTTCAAGGAGTCATCTATGAGATTACCCTTAATTAG

Protein sequence

MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDGTRSVVGNLQGVIYEITLN*

Homology

[Close]

BLAST of CsaV3_6G038830 vs. NCBI nr
Match: KGN48083.1 (hypothetical protein Csa_004442 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV 60
          MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV
Sbjct: 1  MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV 60

Query: 61 DGTRSVVGNLQGVIYEITLN 81
          DGTRSVVGNLQGVIYEITLN
Sbjct: 61 DGTRSVVGNLQGVIYEITLN 80

[Close]

BLAST of CsaV3_6G038830 vs. NCBI nr
Match: XP_011657607.1 (protein N-lysine methyltransferase METTL21A isoform X2 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 5.8e-33
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG
Sbjct: 122 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 181

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 182 TRSVVGNLQGVIYEITLN 199

[Close]

BLAST of CsaV3_6G038830 vs. NCBI nr
Match: XP_004140186.1 (protein N-lysine methyltransferase METTL21A isoform X1 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 5.8e-33
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG
Sbjct: 162 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 221

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 222 TRSVVGNLQGVIYEITLN 239

[Close]

BLAST of CsaV3_6G038830 vs. NCBI nr
Match: XP_008449636.1 (PREDICTED: protein N-lysine methyltransferase METTL21A isoform X1 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGM+M EVDG
Sbjct: 162 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMQMTEVDG 221

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 222 TRSVVGNLQGVIYEITLN 239

[Close]

BLAST of CsaV3_6G038830 vs. NCBI nr
Match: XP_008449637.1 (PREDICTED: protein N-lysine methyltransferase METTL21A isoform X2 [Cucumis melo])

HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGM+M EVDG
Sbjct: 122 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMQMTEVDG 181

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 182 TRSVVGNLQGVIYEITLN 199

[Close]

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL
Match: A0A0A0KEY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429130 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.7e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV 60
          MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV
Sbjct: 1  MLLSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEV 60

Query: 61 DGTRSVVGNLQGVIYEITLN 81
          DGTRSVVGNLQGVIYEITLN
Sbjct: 61 DGTRSVVGNLQGVIYEITLN 80

[Close]

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL
Match: A0A1S3BNE5 (protein N-lysine methyltransferase METTL21A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491460 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-32
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGM+M EVDG
Sbjct: 162 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMQMTEVDG 221

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 222 TRSVVGNLQGVIYEITLN 239

[Close]

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL
Match: A0A1S3BLV1 (protein N-lysine methyltransferase METTL21A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491460 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.1e-32
Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGM+M EVDG
Sbjct: 122 ICFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMQMTEVDG 181

Query: 63  TRSVVGNLQGVIYEITLN 81
           TRSVVGNLQGVIYEITLN
Sbjct: 182 TRSVVGNLQGVIYEITLN 199

[Close]

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL
Match: A0A6J1FRY5 (protein N-lysine methyltransferase METTL21A OS=Cucurbita moschata OX=3662 GN=LOC111448270 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-28
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLF+TAERLLQVRGRGKCKFILAYVSRA+ MD LILDEASRHGM+M EV G
Sbjct: 162 ICFQQSSVPLLFETAERLLQVRGRGKCKFILAYVSRAKIMDALILDEASRHGMQMTEVAG 221

Query: 63  TRSVVGNLQGVIYEITL 80
           TRSVVGNLQGVIYEITL
Sbjct: 222 TRSVVGNLQGVIYEITL 238

[Close]

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL
Match: A0A6J1DFS1 (protein N-lysine methyltransferase METTL21A OS=Momordica charantia OX=3673 GN=LOC111020665 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLFKTAERLLQVR RGKCKFILAYVSRA+ MD LILDEA+RHGM+M EV G
Sbjct: 162 ICFQQSSVPLLFKTAERLLQVRERGKCKFILAYVSRAKIMDALILDEAARHGMQMTEVAG 221

Query: 63  TRSVVGNLQGVIYEITL 80
           TRSVVGNLQGVIYEITL
Sbjct: 222 TRSVVGNLQGVIYEITL 238

[Close]

BLAST of CsaV3_6G038830 vs. TAIR 10
Match: AT2G26810.1 (Putative methyltransferase family protein )

HSP 1 Score: 110.9 bits (276), Expect = 4.8e-25
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLF + E+LL++RG+G CKFILAYVSRAR MD+ IL E ++HGM M EV G
Sbjct: 171 ICFQQSSVPLLFDSVEQLLRIRGQGNCKFILAYVSRARQMDSAILREGAQHGMLMNEVSG 230

Query: 63  TRSVVGNLQGVIYEITL 80
           TR  VGNL+GVIYEITL
Sbjct: 231 TRCTVGNLEGVIYEITL 247

[Close]

BLAST of CsaV3_6G038830 vs. TAIR 10
Match: AT2G26810.2 (Putative methyltransferase family protein )

HSP 1 Score: 110.9 bits (276), Expect = 4.8e-25
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 3   LSFQQSSVPLLFKTAERLLQVRGRGKCKFILAYVSRARSMDTLILDEASRHGMRMIEVDG 62
           + FQQSSVPLLF + E+LL++RG+G CKFILAYVSRAR MD+ IL E ++HGM M EV G
Sbjct: 171 ICFQQSSVPLLFDSVEQLLRIRGQGNCKFILAYVSRARQMDSAILREGAQHGMLMNEVSG 230

Query: 63  TRSVVGNLQGVIYEITL 80
           TR  VGNL+GVIYEITL
Sbjct: 231 TRCTVGNLEGVIYEITL 247

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038830 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48083.1	1.4e-34	100.00	hypothetical protein Csa_004442 [Cucumis sativus]	[more]
XP_011657607.1	5.8e-33	97.44	protein N-lysine methyltransferase METTL21A isoform X2 [Cucumis sativus]	[more]
XP_004140186.1	5.8e-33	97.44	protein N-lysine methyltransferase METTL21A isoform X1 [Cucumis sativus]	[more]
XP_008449636.1	6.4e-32	94.87	PREDICTED: protein N-lysine methyltransferase METTL21A isoform X1 [Cucumis melo]	[more]
XP_008449637.1	6.4e-32	94.87	PREDICTED: protein N-lysine methyltransferase METTL21A isoform X2 [Cucumis melo]	[more]

BLAST of CsaV3_6G038830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G038830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEY7	6.7e-35	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429130 PE=4 SV=1	[more]
A0A1S3BNE5	3.1e-32	94.87	protein N-lysine methyltransferase METTL21A isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3BLV1	3.1e-32	94.87	protein N-lysine methyltransferase METTL21A isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1FRY5	2.1e-28	88.31	protein N-lysine methyltransferase METTL21A OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1DFS1	1.4e-27	87.01	protein N-lysine methyltransferase METTL21A OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CsaV3_6G038830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26810.1	4.8e-25	70.13	Putative methyltransferase family protein	[more]
AT2G26810.2	4.8e-25	70.13	Putative methyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038899	Methyltransferase-like protein 22	PANTHER	PTHR23108	METHYLTRANSFERASE-RELATED	coord: 5..79
None	No IPR available	PANTHER	PTHR23108:SF3	METHYLTRANSFERASE FAMILY PROTEIN-RELATED	coord: 5..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G038830.1	CsaV3_6G038830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006479	protein methylation
molecular_function	GO:0008276	protein methyltransferase activity