CsaV3_6G038650 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGTCCACTTACCATTTACATTATAGTACTACTTCTTCTCTACTCTCTCTCTCTCTCTTTCTTTCTCGACCAGACTAGTCCCATCCTCATCTTAATTTTAAGATTTTTGTACACATTCTATTTCTTTTTTAATTACTTCTTTCTTCAAAAAAAGAAAAAAAGAAGAAAAAAGAAAGAGCATCTTTCTCTTATTTCTCTCTTATTTCTCTCTTTCTATCTAACCCCATTTCTTTTCTCTTTTTCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTCACAAAAACAGAATTTAGGTAGGTTCCTTCATTCTTTTCTTTCCCTTTTCCTTCAATTTCATTCCAACAAAAAATCTCTTAATTACTTCTAATCTGTGTTTCTTTTCTTCTTCTTTTTTTTTTTTCATTTTTAATATAAATTATTCAAAAAATATATACATATATTTGTGGATTAGAAAAGGATTATAAATCAAAGCAAAATGTCACTGGACATGATGGCTTCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTACAAACCCCCCCTTCACCTTTCTATTATTTCTTCTTCTTTTTTTCTTTTTTCTTTTTTGATTTGACAATAATATCTCTCAAACTTAATTTCTTTTTAATGAAATTTATGAATGTTTTTGTATTAATATATATGTCTCTTTTTCTTTTTAAATGACTGGCTACAGTACTTTCGTTTTCAGCTGAAAAGACCAGCAAAATTTCTTCACTTTTTTATCAGTTCAGACTGTTGGAGGAGGAAATTTAAATATATATATATATATATATATTTATATATATATATATTCTATTTTTATAATATATACATGTGTATGTGTGTATATATATTTCAAACCAAATCATAATTTTGTTCTTTTTACTGTTGGAATCTTGAATACTGATATAACAAAATTTTGAGATCTCTTTCTATATTTTTCTCGATAAATCTGCCAAGAAATAAAAGAAATTATATATATTTTATGAGGAATTTCACCTGGGTTTCCAATCAAAACCCTCAGATCATTTGTGTACTATTTTTTTTCCTTCCAAAAGTGTGGTTGAAAAAATTACCCAAATTTTGCATTTAATGAAAAAAGTTTTTATTTTGGGATTTTTTTTAGAGAAATTGAAGTGAATTTCTAGCTTTAAAAGGAAGTGAAAGCTAGGGTTCTTGATTTTTCTTTTTCTTAGATCAAAATTAGGTCATGTGTTGTAATTAATTACATGTGATGAATGAGGATCTGATTTCGCTCTTCTCTCTCCTCAATTACAACATAGAATGTTGTTAAGATGGAAATTTTTGAAAATATTTAATTAAACGAGGTTATTGATGTTTTAATCCGTTGAATTATGTACGGATAATTGTTTGATCATATGATCGTGGAATAATCTCTCTTCGATTATTATATCAAACATCATATTCCAATTTTTGCAAGCTTTCTACCTCAGATTCTTCTCATTCTGAAAATCTGCTGTCTCTCCATTTTTGGACAGATGGGAAGAAAAAAAAAAAAAAAAAAAGCCTGTTGATCTCTAAAGCAACGTTTACCCGATTTTCTCTAAAAAACCAAAATCTCGTATTCGAGATTCGAAAGAAGTGCTTGGGAAGTGGAGTAGTAACACGGAATTTTTTAGGTCTAATAGTTATTTTTTACTATGGTTTCCGTTCCAGTCATGTCGTTTTCTAGTTTTTAAAATCTCTTTCCTTCTGTTTCTTTAATCTAAGTTTTCTATCTTTTATCTTCTTGCTTGCGGTGGTGTCAGATTCTTTTGATAGTCAGTAGCAGCAGCCACCATTGAAAAACATGTTTGAAGAGATCATTATTATTATTATTATGGGAAGTTAATTAATTAATGAATAGGATGAAAGATTAAATATGAGAAATAATAATAATGTGTGAATGCTTTTTTTCTTTTTGTTGGAGAGATATAGGTAAGTGTTCCATGCAACAGCATGTTCACATTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTTTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCTCAACAGGTACATTTTCACTTCATCATTTCTTGTTTTATTATTACACTCCTATTTCAAATCCTTCCGAGTTCCATATAGGTTGGTTTTTATGTTTCAAAATACCGTTCGTATATAACTTTTATCAGTTCTTAAAAAGTTTAATTAAGTTTATCATCTTACATGTTTCCAAATTGTAACTCTGAGATTTGATTTTTTTTCGTTTCAATTTTGTCTTTAGAAAACTTTGATATATATTTCACTAAATACTAAGTCTTTAATATTAATTCAGTAGTTTTCACTGCTGCTAAAACTAATCTCAAATTTTCACTTAATGACGTTGAAGACTAAAGTAAAATAAATCTCAAATCTCAAGAGGGTAAACTCGTAACATTTCCAAACTAAAGTGCAAAGTTCAAGTTACTCAAAAAACTTTTTTTTCTTTTAACAATATTCACCTAAGGATAAGAAGGTGTACACCAAAACATCTAACCTAGATTGACACTACTCTAACACTCTCATTACGTCCTAAAACCAATTTCGACCTCAAAACTTTAAGAACTAAAAGTATAAAGTTGAAATATTCAAGTGTATGATAGGATGTTAAAGGTACGTGAAGCTATAAGTGACGTTTTGAGACATTTTCTGTATGATTTGTGTTGTTTTAGTTATATAGGAATGAAATAATATTGTTTATTATTATTTTCTAAGAGTGGTAAAGTAAATAAGTATGGTTTAGGTATATCTAGTAAAAGTATTTGTTTGTGTGTGTATTTTAGGGTCATAAACAACAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTACCAAATCCACCAAAATTGGTTCTCTTGATTCTTCTGCAGAACGTGACCAACATAGAATCCCTCCTATTCGCCGTGAGTTTTCTTTTTTTTTCTTTTTTATGAATTAATTGAGAATAGATTAATTAATAATAACTAAGATTTAAGAAAAATTATTATAAGTTAATCACAAAACTACTAAATAAAAATATTAACAATCGAATCGAACTATCTATTGGCCGAAAAGGTTGGAAACGAAATATTCAACACTTACTTTAATTTAATTTAATTGCCAAAACCAACTACCAAACTTATCTAATTTCTTCTCTTTCTCAATATTAATTAGAGCACAATATTTGGTGAAGTTTTATTACTTTACTATCACTCTTTTTTATTTTTGAAAATGATGCTTGTTTCTTTTATCCTATTTTACAGTGAAACTATAGAAAAATAAAAACAGTTTTAAAATTATTTTAGTTTAGTAGTTTTTAAAATTTATTTAGATTTTAATTATATTCATTAAATGTAGTTAACAAAAAAAAAAAAACCAATATATATATAGGACTAATATCATTATTGTTTTGTTTTCTAAGGAAAAAATACTAATGTTTATAAATTTAACGTTGAAAAATAAAAAAAAATCAAATAATTATCAAGTAACCGTGTTATTGTTTTTAAAGTGGTAGATTTGGAATATAAATACTAACATATTGGTAATAATTAAAAGTGTAATATAATAATAACCACATGAAATTTATGGTACCATAGACATAAATTGTTTCTCCTTAGCTACTTAAGAATGAGTATTTATTTTTTTTATTTTCCAAACTGAATTTAACACTATTTTATCAAGTAAATAAACTATAAGAAAATATTGATAATCTTTTTTATTTTTTTGGTGTGGAAACAGAAATGTGAGAGAAAAAAAAAGGTTTCAATCTTAGTTCTTAAATTTGGAAGCAATTTTCATAAACTTGGTTTTAGTTCTAACTTTCAAGTTCTTTTTTATTTCAACGATGAAAATGAATGTAAGTGGGTATAATGAAAATGTTAAAAATGTATAAATTTGATTAGAACATTCGATTTCTCTCTTTCTTTTATAATATAGTTTATTTAAAAGACAAATAATAAAATTAACTTCTTAAAATGTTTGGTTGCGTCTGTCTATTAAGTATTAGCCCTTACAAAAAACTATAATAGATGTGGAAGTTTGACTAACATAAGATGTAATAATTAACTTTCCTAATGCAATTAATTAAAATGAGATATATTGTAAAGTTTATTGGATATGAATTGTTACATGCATATCATGAATTAGGTGGCCCTATCTTGGATGGTGACCATACATGCATAATAGAATATGACCTATCAATATCATGGGCCATTCTTTATACATATATATGTTAATCCGTATGTATTTATGTACATATGCTATGTATTGGTTACTTTGGTTATTAACACACTTAGCACAAAAATATGAAAAACAACTGTAACCATACCCATTTTCATTGAATTGCCTTTCATTCATTTGTCACATGTCATTGATTCCTCTCTTCTTCTTCTTTCTCACTTTCTTCATTTTCCATTTTCTCCCCCTCATAATTACACTGCTTTTCATTTTTTTTTTCTTAATATGCTGGTTAATTATTATTTATTAGATGCTTCATACTAAAAACATAAGTTGATTTTAGGTGGATTATTAAGTTAACTAGAAATGTCTAAGTTAGGTTGACAAATTCGTAACTCTCATCCTATTCTAGTTTCCATTAGTTGATAAACCAATAAGCCCTTCGAATAACTTTTCGAAAATGCATTAATCAGAGTGAGTTAGACTCGGTAGTATTGACATGATTTTTGTCGTCCCTGGAGGTCAAAGGGTTAATTGTCTCTCACCTCATATTGAAAAAAAAAGACTAGTTAAGATAAACTAATATACTTAATTTGATTAAACATTTGAATATTTTGGATGTTATATAGATACAAGATAACATTGGTTGGTATTCTTTTAGGGTAAACTCAAGGTAGCTAATCTATATAACACCTGTGACGATTTATGTATTAGATTTAACCAAGCTTAGATGTATTGGTTCTTGCATTTAACATGACTCATTAATGTTTAAGAAGTTAATTAGCATCATAATAATAATTATAACATAAAGTGGGGATGTTTGATAATAGAGAATTTCAAGAGTTTGTTGTTAATTAATATTACTAATGTTTTGAGTAATTTAAGAATGGGTTTTGGATGATATTATTGGCAGCACCAGAGAAAAGACAACGTGTTCCATCGGCATATAATAGGTTCATAAAGTAAGTATCATTTGCTCAATTAATTAGGGGATTAATTACCCATAATTAGTTTTCATGACTAATATAATTAAGTATATTTTGGTGTTACAAAAGTAATTAAAATGTGGGACTTTGCATGTGTGTAGAGAGGAAATCCAAAGGATTAAGGCTAAAAATCCTGACATAAGCCATAGAGAAGCCTTTAGCACAGCAGCTAAAAATGTAAGTACTTTTAGCTTTTGCTTTTAGCTTCCTTATGTTAATTAATGATCTTGCATGCATGCTTTCTTTTTTGTTTCCATGCTGTCTTTGTAAAATGTTTGACATAATCCTGATTTGTTATATTGTCTAAGAGTAATAATAAAAAAAAGATATATATGTATTTTTAAATAAAATACGGAAGAGATGGCAAATGCATCGAAACAACAACTTTATCCTTATCGATCTCGTTTGTTCGGTATGTTTATTAATGAATTATCCACTTTTTAAACAAGATATTGGACTTTTTTATTATTATTATTATTTTGCTCTCAATAATTGTCATAGAAAGTTTACAATAAAAGATAACTCTTAATAAATATATATGGATGAAAATTACTCTTTTTATTATTATGTATAGGTAAGAATACGATAAGAGTTGTAATTAAGATGAAGATTAGATTGAAAAGTCTCCATTATGATATAGATAAAGAGTTTATGAAATAAAGTATGATTTAAACGGTATTTGTTTTCTTTCGTGTATCTATATATATACTTTTTGGTTTTACACGTAATTTTTTTTATAGAAAAAACTAATAGTAGAGTGGAAAATTTTAAATTGAGATGATTTCCATTTTGATTAGGATCTAATCCCAATCATTATATGTTGATATATATTAAATGGATGGATTAAAGTGAATAATCTTTTCTTTTCTTTTATTTTTTTGTAATTTTGCAGTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAATTGGATGGAAATAAGCAAACAAAATAA ATGTCACTGGACATGATGGCTTCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACATTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTTTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCTCAACAGGGTCATAAACAACAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTACCAAATCCACCAAAATTGGTTCTCTTGATTCTTCTGCAGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAAAGACAACGTGTTCCATCGGCATATAATAGGTTCATAAAAGAGGAAATCCAAAGGATTAAGGCTAAAAATCCTGACATAAGCCATAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAATTGGATGGAAATAAGCAAACAAAATAA ATGTCACTGGACATGATGGCTTCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACATTGGTGACTGTGAGATGTGGGCATTGTTCAAATCTGCTTTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCTCAACAGGGTCATAAACAACAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTACCAAATCCACCAAAATTGGTTCTCTTGATTCTTCTGCAGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAAAGACAACGTGTTCCATCGGCATATAATAGGTTCATAAAAGAGGAAATCCAAAGGATTAAGGCTAAAAATCCTGACATAAGCCATAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAATTGGATGGAAATAAGCAAACAAAATAA MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSTKSTKIGSLDSSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK* Homology
BLAST of CsaV3_6G038650 vs. NCBI nr
Match: XP_004140176.1 (putative axial regulator YABBY 2 [Cucumis sativus] >XP_011657596.1 putative axial regulator YABBY 2 [Cucumis sativus] >KGN48059.1 hypothetical protein Csa_004092 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. NCBI nr
Match: XP_008449608.1 (PREDICTED: putative axial regulator YABBY 2 [Cucumis melo] >XP_016900784.1 PREDICTED: putative axial regulator YABBY 2 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 9.4e-89 Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. NCBI nr
Match: XP_038902333.1 (putative axial regulator YABBY 2 isoform X3 [Benincasa hispida]) HSP 1 Score: 334.3 bits (856), Expect = 6.1e-88 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. NCBI nr
Match: XP_022153076.1 (putative axial regulator YABBY 2 [Momordica charantia]) HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77 Identity = 158/174 (90.80%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. NCBI nr
Match: XP_022986990.1 (putative axial regulator YABBY 2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 293.9 bits (751), Expect = 9.2e-76 Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 5.4e-55 Identity = 118/175 (67.43%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.2e-47 Identity = 105/173 (60.69%), Postives = 124/173 (71.68%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 5.6e-44 Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.6e-43 Identity = 97/177 (54.80%), Postives = 123/177 (69.49%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.9e-39 Identity = 100/200 (50.00%), Postives = 122/200 (61.00%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy TrEMBL
Match: A0A0A0KGY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426940 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 4.9e-91 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy TrEMBL
Match: A0A1S4DXR9 (putative axial regulator YABBY 2 OS=Cucumis melo OX=3656 GN=LOC103491442 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89 Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy TrEMBL
Match: A0A6J1DJL5 (putative axial regulator YABBY 2 OS=Momordica charantia OX=3673 GN=LOC111020666 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77 Identity = 158/174 (90.80%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy TrEMBL
Match: A0A6J1JFK2 (putative axial regulator YABBY 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 4.4e-76 Identity = 151/177 (85.31%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. ExPASy TrEMBL
Match: A0A6J1FT58 (putative axial regulator YABBY 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448539 PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75 Identity = 151/177 (85.31%), Postives = 161/177 (90.96%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 215.3 bits (547), Expect = 3.9e-56 Identity = 118/175 (67.43%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48 Identity = 105/173 (60.69%), Postives = 124/173 (71.68%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48 Identity = 105/173 (60.69%), Postives = 124/173 (71.68%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 161.4 bits (407), Expect = 6.6e-40 Identity = 95/184 (51.63%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CsaV3_6G038650 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39 Identity = 93/177 (52.54%), Postives = 110/177 (62.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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