CsaV3_6G038410 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038410
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NAC domain-containing protein
Location	chr6: 21879676 .. 21880864 (+)
RNA-Seq Expression	CsaV3_6G038410
Synteny	CsaV3_6G038410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATTCCACAAACATAGACAGTACGAAGTACCATACTTTCTAATTTCACTCGGCAATTAATTCCCATCTCTCTCTCTCACTCTCATCCAATCTCCTTATATATATAAACACAAACAATATAATTAATCTAAAGTTTAAAAAAATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGTACGTAGACAGATCAATGTACTTATAGTAATAATAAATTAATGTGATTAATTGTAATTAATTAATTTTGGTGTGCAGGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGGTAATTAAATTCAATTTATTTGTGAAAATGAAAATATTACTCCTTCATTTATATTAGTTAATTAAAAAAAAACAATATTTTTGGTCCTTAAACTTTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGATGAATTCGCATAAGATATCACAAGATAGACGTACCACAACCTTCTTTTATATTTTGATTATCATTATGGTTCATTTTTTTCTTTTTAAATTTTGTAATAATAATAATACCCAACACATCCATTTTCCTCATGAAAATAAAGGGTTATAATTAATTATGTACGGAAGCTGACTGATTAAAATAAAATATTTTTAAAAAATATGTATTCTTTTTTTCTTCCTCCATTGGAAGCACAATCAATAATATAATTCAATTATATGCGCATTTGTTTTT

mRNA sequence

ATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGA

Coding sequence (CDS)

ATGGATCATGATCAGGTAATTATTCGTGAAGAAGAAGAAGAAGATCAGAGTCTACCGGGGTTCCGATTCTTTCCGACGGAAGAAGAATTGGTATTGTTCTATCTGCACAATCAACTTCAGGGATGCCGTAAGGATATCCACCGTGTGATTCCGGTGGTTGACATTTACGAGATTGAGCCATTCAATCTCTCAAGGTATTCAGGGGAAAGGTGTAGGAGAGACAGTGAGCAATGGTTTTTCTTTGTGAAGCAACAAGAGCGACAAGCGAGGGGAGGGAGAGCGAATAGAACGACGTCGTCAGGGTCCGGGTATTGGAAGGCGACAGGGTCTCCAACTTACGTGTACTCGTCGGAGAATCGGGTGATCGGAGTTAAGAAAACGATGGTATTTTATAGAGGAAAAGCTCCCACAGGAACTAAAACTAAGTGGAAAATGAATGAATATAAAGCCATTCAAGACATCATTCCTCCTCATTCCCCTTTCTCTTCTACTCCTATTCCTCAGTTACGACACGAGTTCAGTTTGTGTCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAAGCTTATAGCTGA

Protein sequence

MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS*

Homology

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BLAST of CsaV3_6G038410 vs. NCBI nr
Match: XP_004140261.1 (NAC domain-containing protein 90 [Cucumis sativus] >KGN48035.1 hypothetical protein Csa_004460 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 5.8e-111
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP
Sbjct: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPLKAYS
Sbjct: 181 VSGSFRAFDRRPLKAYS 197

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BLAST of CsaV3_6G038410 vs. NCBI nr
Match: XP_008449583.1 (PREDICTED: NAC domain-containing protein 90 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDH + I  EEEEEDQ LPGFRFFPTEEELVLFYLHNQLQG RKDIHRVIPVVDIYEIEP
Sbjct: 5   MDH-EAIREEEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEP 64

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 65  FNLSRYSGERCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENR 124

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPH P SSTPIPQLRHEFSLCRVYV
Sbjct: 125 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQLRHEFSLCRVYV 184

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPL+ Y+
Sbjct: 185 VSGSFRAFDRRPLEVYN 200

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BLAST of CsaV3_6G038410 vs. NCBI nr
Match: XP_038902139.1 (NAC domain-containing protein 90-like [Benincasa hispida])

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91
Identity = 171/192 (89.06%), Postives = 179/192 (93.23%), Query Frame = 0


Query: 4   DQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNL 63
           DQVII  EEEE   LPGFRFFPTEEELV FYLHNQLQG RKD+HRVIPVVDIY IEPF+L
Sbjct: 3   DQVIIGGEEEE--ILPGFRFFPTEEELVSFYLHNQLQGRRKDMHRVIPVVDIYAIEPFDL 62

Query: 64  SRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIG 123
           SRYSG+R RRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSP+YVYSS N+VIG
Sbjct: 63  SRYSGQRSRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPSYVYSSHNKVIG 122

Query: 124 VKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSG 183
           VKKTMVFYRGKAPTG KTKWKMNEYKAIQ+ IPPHSP SSTPIPQLRHEFSLCRVYVVSG
Sbjct: 123 VKKTMVFYRGKAPTGNKTKWKMNEYKAIQN-IPPHSPSSSTPIPQLRHEFSLCRVYVVSG 182

Query: 184 SFRAFDRRPLKA 196
           SFRAFDRRPL+A
Sbjct: 183 SFRAFDRRPLEA 191

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BLAST of CsaV3_6G038410 vs. NCBI nr
Match: XP_022995147.1 (NAC domain-containing protein 90 [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 161/194 (82.99%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MD       EE  + +  PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEP
Sbjct: 1   MDEAHRTAGEELADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSR+SGERCRRDSEQWFFFVKQQER+ARGGR NRTTSSGSGYWKATGSP+YVYSS+NR
Sbjct: 61  FNLSRWSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAI+D    +S  SS P P+LRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLK 195
           VSGSFRAFDRRPLK
Sbjct: 181 VSGSFRAFDRRPLK 191

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BLAST of CsaV3_6G038410 vs. NCBI nr
Match: TYJ96056.1 (NAC domain-containing protein 90 [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 5.5e-85
Identity = 159/174 (91.38%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDH + I  EEEEEDQ LPGFRFFPTEEELVLFYLHNQLQG RKDIHRVIPVVDIYEIEP
Sbjct: 5   MDH-EAIREEEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEP 64

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 65  FNLSRYSGERCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENR 124

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFS 175
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPH P SSTPIPQ    +S
Sbjct: 125 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQASLSYS 177

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BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot
Match: Q9FMR3 (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-61
Identity = 114/179 (63.69%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 15  DQSLPGFRFFPTEEELVLFYLHNQLQGCRKD-IHRVIPVVDIYEIEPFNLSRYSGERCRR 74
           D+   GFRF+PTEEELV FYL NQL+G   D +HRVIPV+D++E+EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 75  DSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 134
           D+EQWFFFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +N++IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 135 KAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 193
           KAPTG KTKWKMNEY A+ + +      +++ IP+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDETV------NASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

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BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot
Match: Q9M290 (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.4e-51
Identity = 103/178 (57.87%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRF+PTE EL+ +YL  QL G    IH +IP++D++ +EP  L   +GERCR D+EQW 
Sbjct: 8   GFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWI 67

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           FFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +NRVIGVKKTMVFY GKAPTG 
Sbjct: 68  FFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 127

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEYKA++         S + IP+             SGS RAFDRRP +AY+
Sbjct: 128 KTKWKMNEYKAVETA-------SVSTIPK-------------SGSSRAFDRRPTEAYA 163

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BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot
Match: Q9ZVP8 (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 3.4e-29
Identity = 71/172 (41.28%), Postives = 103/172 (59.88%), Query Frame = 0


Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           ++ + D  +PGFRF PTEEEL+ FYL  +++G R ++  +I  +D+Y  +P+ L   +  
Sbjct: 44  DDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAI 103

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKT 129
           GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  +R IG+KKT
Sbjct: 104 GEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPIGLKKT 163

Query: 130 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           +VFY GKAP GT+T W MNEY+     +P H           + E SLCRVY
Sbjct: 164 LVFYSGKAPKGTRTSWIMNEYR-----LPHHETEK-----YQKAEISLCRVY 196

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot
Match: Q10S65 (NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-29
Identity = 76/184 (41.30%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 13  EEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIH-RVIPVVDIYEIEPFNLSRYS--GE 72
           E +Q LPGFRF PTEEEL+ FYL   + G  K +H  +I  ++IY  +P++L   +  GE
Sbjct: 13  EVEQDLPGFRFHPTEEELLDFYLSRVVLG--KKLHFNIIGTLNIYRHDPWDLPGMAKIGE 72

Query: 73  RCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSS--ENRVIGVKKT 132
           R      +W+FFV +  +   GGR NRTT    G+WKATGS   + SS    RVIG+KKT
Sbjct: 73  R------EWYFFVPRDRKAGNGGRPNRTTE--RGFWKATGSDRAIRSSGDPKRVIGLKKT 132

Query: 133 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRA 192
           +VFY+G+AP GTKT W MNEY+       P    +    P  + +  LC++Y  +   + 
Sbjct: 133 LVFYQGRAPRGTKTDWVMNEYRL------PDYGAARAAAPPPKEDMVLCKIYRKATPLKE 180

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot
Match: I1LPE9 (NAC domain-containing protein 6 OS=Glycine max OX=3847 GN=NAC6 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 17  SLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS--GERCRRD 76
           +LPGFRF PTEEEL+ FYL N + G +K  + VI  ++IY+ +P++L   +  GER    
Sbjct: 15  TLPGFRFHPTEEELLDFYLKNMVVG-KKLRYDVIGFLNIYQHDPWDLPGLAKVGER---- 74

Query: 77  SEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYV--YSSENRVIGVKKTMVFYR 136
             +W+FFV + ++   GGR NRTT    G+WKATGS   +   S   R+IG++KT+VFY+
Sbjct: 75  --EWYFFVPRDKKHGSGGRPNRTTE--KGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQ 134

Query: 137 GKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRR 192
           G+AP G KT W MNEY+     +P +         +L  E  LC++Y  + S +  ++R
Sbjct: 135 GRAPRGCKTDWVMNEYR-----LPDNC--------KLPKEIVLCKIYRKATSLKVLEQR 171

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL
Match: A0A0A0KEE9 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.8e-111
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP
Sbjct: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPLKAYS
Sbjct: 181 VSGSFRAFDRRPLKAYS 197

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL
Match: A0A1S3BMD5 (NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.1e-102
Identity = 184/197 (93.40%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDH + I  EEEEEDQ LPGFRFFPTEEELVLFYLHNQLQG RKDIHRVIPVVDIYEIEP
Sbjct: 5   MDH-EAIREEEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEP 64

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 65  FNLSRYSGERCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENR 124

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPH P SSTPIPQLRHEFSLCRVYV
Sbjct: 125 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQLRHEFSLCRVYV 184

Query: 181 VSGSFRAFDRRPLKAYS 198
           VSGSFRAFDRRPL+ Y+
Sbjct: 185 VSGSFRAFDRRPLEVYN 200

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL
Match: A0A6J1JXZ0 (NAC domain-containing protein 90 OS=Cucurbita maxima OX=3661 GN=LOC111490775 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.2e-86
Identity = 161/194 (82.99%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MD       EE  + +  PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEP
Sbjct: 1   MDEAHRTAGEELADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSR+SGERCRRDSEQWFFFVKQQER+ARGGR NRTTSSGSGYWKATGSP+YVYSS+NR
Sbjct: 61  FNLSRWSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAI+D    +S  SS P P+LRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLK 195
           VSGSFRAFDRRPLK
Sbjct: 181 VSGSFRAFDRRPLK 191

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL
Match: A0A5D3BAY7 (NAC domain-containing protein 90 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00150 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85
Identity = 159/174 (91.38%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MDH + I  EEEEEDQ LPGFRFFPTEEELVLFYLHNQLQG RKDIHRVIPVVDIYEIEP
Sbjct: 5   MDH-EAIREEEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEP 64

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLSRYSGERCRRDSEQWFFFVKQQER+ARGGRANRTTSSGSGYWKATGSPTYVYSSENR
Sbjct: 65  FNLSRYSGERCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENR 124

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFS 175
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPH P SSTPIPQ    +S
Sbjct: 125 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQASLSYS 177

[Close]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL
Match: A0A6J1H553 (NAC domain-containing protein 90 OS=Cucurbita moschata OX=3662 GN=LOC111459674 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.9e-85
Identity = 160/194 (82.47%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60
           MD  +    EE  + +  PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEP
Sbjct: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120
           FNLS  SGERCRRDSEQWFFFVKQQER+ARGGR NRTTSSGSGYWKATGSP+YVYSS+NR
Sbjct: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAI+D    +S  SS P P+LRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLK 195
           VSGSFRAFDRRPLK
Sbjct: 181 VSGSFRAFDRRPLK 191

[Close]

BLAST of CsaV3_6G038410 vs. TAIR 10
Match: AT5G22380.1 (NAC domain containing protein 90 )

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-62
Identity = 114/179 (63.69%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 15  DQSLPGFRFFPTEEELVLFYLHNQLQGCRKD-IHRVIPVVDIYEIEPFNLSRYSGERCRR 74
           D+   GFRF+PTEEELV FYL NQL+G   D +HRVIPV+D++E+EP +L   +G RCR 
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 75  DSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRG 134
           D+EQWFFFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +N++IG KKTMVFY G
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTG 122

Query: 135 KAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRP 193
           KAPTG KTKWKMNEY A+ + +      +++ IP+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 123 KAPTGRKTKWKMNEYHAVDETV------NASTIPKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]

BLAST of CsaV3_6G038410 vs. TAIR 10
Match: AT3G44350.2 (NAC domain containing protein 61 )

HSP 1 Score: 231.1 bits (588), Expect = 7.7e-61
Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRF+PTE EL+ +YL  QL G    IH +IP++D++ +EP  L   +GERCR D+EQW 
Sbjct: 8   GFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWI 67

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           FFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +NRVIGVKKTMVFY GKAPTG 
Sbjct: 68  FFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 127

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEYKA++         S + IP+LR EFS+CR+Y+ SGS RAFDRRP +AY+
Sbjct: 128 KTKWKMNEYKAVETA-------SVSTIPKLRPEFSICRIYIKSGSSRAFDRRPTEAYA 176

[Close]

BLAST of CsaV3_6G038410 vs. TAIR 10
Match: AT3G44350.1 (NAC domain containing protein 61 )

HSP 1 Score: 202.2 bits (513), Expect = 3.8e-52
Identity = 103/178 (57.87%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 20  GFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYSGERCRRDSEQWF 79
           GFRF+PTE EL+ +YL  QL G    IH +IP++D++ +EP  L   +GERCR D+EQW 
Sbjct: 8   GFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWI 67

Query: 80  FFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMVFYRGKAPTGT 139
           FFV +QER+ARGGR +RTT  GSGYWKATGSP  V+S +NRVIGVKKTMVFY GKAPTG 
Sbjct: 68  FFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGR 127

Query: 140 KTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYVVSGSFRAFDRRPLKAYS 198
           KTKWKMNEYKA++         S + IP+             SGS RAFDRRP +AY+
Sbjct: 128 KTKWKMNEYKAVETA-------SVSTIPK-------------SGSSRAFDRRPTEAYA 163

[Close]

BLAST of CsaV3_6G038410 vs. TAIR 10
Match: AT2G02450.1 (NAC domain containing protein 35 )

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 71/172 (41.28%), Postives = 103/172 (59.88%), Query Frame = 0


Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           ++ + D  +PGFRF PTEEEL+ FYL  +++G R ++  +I  +D+Y  +P+ L   +  
Sbjct: 44  DDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAI 103

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKT 129
           GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  +R IG+KKT
Sbjct: 104 GEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPIGLKKT 163

Query: 130 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           +VFY GKAP GT+T W MNEY+     +P H           + E SLCRVY
Sbjct: 164 LVFYSGKAPKGTRTSWIMNEYR-----LPHHETEK-----YQKAEISLCRVY 196

[Close]

BLAST of CsaV3_6G038410 vs. TAIR 10
Match: AT2G02450.2 (NAC domain containing protein 35 )

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 71/172 (41.28%), Postives = 103/172 (59.88%), Query Frame = 0


Query: 10  EEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEPFNLSRYS-- 69
           ++ + D  +PGFRF PTEEEL+ FYL  +++G R ++  +I  +D+Y  +P+ L   +  
Sbjct: 44  DDHDHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAI 103

Query: 70  GERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKT 129
           GE+      +W+F+V +  +   G R NR T+  SGYWKATG+   + S  +R IG+KKT
Sbjct: 104 GEK------EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPIGLKKT 163

Query: 130 MVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVY 180
           +VFY GKAP GT+T W MNEY+     +P H           + E SLCRVY
Sbjct: 164 LVFYSGKAPKGTRTSWIMNEYR-----LPHHETEK-----YQKAEISLCRVY 196

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140261.1	5.8e-111	100.00	NAC domain-containing protein 90 [Cucumis sativus] >KGN48035.1 hypothetical prot...	[more]
XP_008449583.1	1.9e-101	93.40	PREDICTED: NAC domain-containing protein 90 [Cucumis melo]	[more]
XP_038902139.1	5.1e-91	89.06	NAC domain-containing protein 90-like [Benincasa hispida]	[more]
XP_022995147.1	1.9e-85	82.99	NAC domain-containing protein 90 [Cucurbita maxima]	[more]
TYJ96056.1	5.5e-85	91.38	NAC domain-containing protein 90 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_6G038410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMR3	2.0e-61	63.69	NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 ...	[more]
Q9M290	5.4e-51	57.87	Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC...	[more]
Q9ZVP8	3.4e-29	41.28	NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ...	[more]
Q10S65	7.6e-29	41.30	NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
I1LPE9	1.1e-27	40.78	NAC domain-containing protein 6 OS=Glycine max OX=3847 GN=NAC6 PE=2 SV=1	[more]

BLAST of CsaV3_6G038410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEE9	2.8e-111	100.00	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV...	[more]
A0A1S3BMD5	9.1e-102	93.40	NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV...	[more]
A0A6J1JXZ0	9.2e-86	82.99	NAC domain-containing protein 90 OS=Cucurbita maxima OX=3661 GN=LOC111490775 PE=...	[more]
A0A5D3BAY7	2.7e-85	91.38	NAC domain-containing protein 90 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1H553	5.9e-85	82.47	NAC domain-containing protein 90 OS=Cucurbita moschata OX=3662 GN=LOC111459674 P...	[more]

BLAST of CsaV3_6G038410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22380.1	1.4e-62	63.69	NAC domain containing protein 90	[more]
AT3G44350.2	7.7e-61	62.36	NAC domain containing protein 61	[more]
AT3G44350.1	3.8e-52	57.87	NAC domain containing protein 61	[more]
AT2G02450.1	2.4e-30	41.28	NAC domain containing protein 35	[more]
AT2G02450.2	2.4e-30	41.28	NAC domain containing protein 35	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 19..149 e-value: 3.1E-28 score: 99.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 17..181 score: 43.560577
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 26..184 e-value: 1.4E-37 score: 130.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 18..180
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 17..195
None	No IPR available	PANTHER	PTHR31989:SF4	NAC DOMAIN-CONTAINING PROTEIN 90	coord: 17..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G038410.1	CsaV3_6G038410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding