CsaV3_6G037330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G037330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 21023789 .. 21024155 (-)
RNA-Seq ExpressionCsaV3_6G037330
SyntenyCsaV3_6G037330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGTATTGGGTGTTTGAGTCTACTCTTTGATAGTCTGATTGTGGTATTGATTTCTTGTTTTGAGCTTTTTTGGTTTCATGGGTTGCTGTAATTTTTGAAGTTGAAAGTGGGTTTTTATTGCAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

mRNA sequence

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

Coding sequence (CDS)

ATGCTTTTGTCTCTCCTCATCTTCCATTTCTCATTCTATGCTTCTTCCTCAAAACGTGTTTCTTCTTCATCTTTCGTTCTCATCTGGTTTTCTTCTTTTCCTTTTCCATCTGGGTTTTGTCTGCTGATACGTCTTGTGGGTGTTGGAAGCTCCAGGCTGAGGCAGGAGGAAAGGAGGAGGAATAATTTGAATTTTGGAATTCAGAAGCTTGACAAGAGTTGTTCAGGAAAGTACCAAATCGATTGA

Protein sequence

MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRRNNLNFGIQKLDKSCSGKYQID*
Homology
[Close]
BLAST of CsaV3_6G037330 vs. NCBI nr
Match: KGN47920.1 (hypothetical protein Csa_004333 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60
          MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NNLNFGIQKLDKSCSGKYQID 82
          NNLNFGIQKLDKSCSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

[Close]
BLAST of CsaV3_6G037330 vs. ExPASy TrEMBL
Match: A0A0A0KDY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60
          MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR
Sbjct: 1  MLLSLLIFHFSFYASSSKRVSSSSFVLIWFSSFPFPSGFCLLIRLVGVGSSRLRQEERRR 60

Query: 61 NNLNFGIQKLDKSCSGKYQID 82
          NNLNFGIQKLDKSCSGKYQID
Sbjct: 61 NNLNFGIQKLDKSCSGKYQID 81

The following BLAST results are available for this feature:
BLAST of CsaV3_6G037330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47920.12.2e-35100.00hypothetical protein Csa_004333 [Cucumis sativus][more]
BLAST of CsaV3_6G037330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G037330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY71.0e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411240 PE=4 SV=1[more]
BLAST of CsaV3_6G037330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G037330.1CsaV3_6G037330.1mRNA