CsaV3_6G037180 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G037180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Kelch repeat-containing F-box family protein
Location	chr6: 20927213 .. 20931668 (+)
RNA-Seq Expression	CsaV3_6G037180
Synteny	CsaV3_6G037180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGGCTTCGTAACTGAAGCTCACAGACAAGTATATTATTTGCGCAATTTTTTTGGGTAGCTTTATAGGTTAAGAGGTAAACTTGAGTACTAGAAACTTTATACAATTTATTTACTTGGGAATTTCCTTGTATCTTTTTTCCTTATTTGGAAAGTCTTATCATGAAAAAAACACCCATTACTGATGGGAATGAAAGTGCTCTTTTCTAATTGTTGGCCATTTATTGGTTAATTTCACATTATGAGATTTGAATATTGGTTAGATTAGTCGTATCATTATTATACACCTTTTCTTTCATTTGCTTGTTTATTCAAACAGTTTTTCTTATTTCTGGATGGGTTAAGACCCTAGTTTTGGAATTTATAACTATCTCTCATTGACTGCCTGAATTAGTTGCCTCTCATAATGACTTTGTCCATAGATACCACATTGTAGGAGTACATCCATCGCAGAGTTGTGTGATGAATGTTGTTTTGCGGCTTAAAAATTCAATTATCAGTATGTGCAAAGTTGCTTTCTTTTCATCTTCTAAATTGTTACCTAATGTTGGATAGTGATTATCATTCTGTATTTCAATCACATCAAACTTTGAGAAGGTATTGACTGGTTCTCTAATGTTTGAATATTCTTCTTTGCTTCTCAGGATACTTGCTTTCTAAATAAGAAACAACCGGTGGTGGATAATCATCAGAAACGAATGAAAAGCGATTATGTTGACTGATCTGATTGACGGTCTCCCAGACGCTGTTGCCCATCAGTGCCTTGCACGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTTTTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTTTACGACCCCATCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGCTGGGTGGTGGCAGTGATGCTGTTGATCCGTTAACCGGTGATCAAGATAGAAACTTCGCAACCAATGAGGTGTGGTCATACGATCCTGTAATACGTCGGTGGTCTCAACGTGCATCAATGCTCATACCACGTGCCATGTTTGCTTGTGGTGTTTTAGAAGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAGTGACGTTTGGATTTCCCTGCCTGATCTACACCGTACTCACAATTCTGCTTGCACAGGAGTGGTGATTGGAGGCGAGTTGCATGTCTTGCACAAGGGAATATCAAAAGTGCAAATTTTAGACAGCCTGCGGCTTGAATGGAGAGTTGAAGAGTATGGTTGGCCCCAAGGTCCAATGGCTGTTGTTCAAGATTCACTTTATGTGATGGGTCATGGACATATTTTCAAGCACCACGGAAGAGAACCTAAAAAATATGTTATTTCAGCATCCGAATTTCGCCAACGAATAGGGTTTGCAATGATTAGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATTGGTCCCGACCGTTTGAATTGGCACATCAAGCCAACGTCAGATGTTGACATATTAACAACAGGAGGCGAGAGACCAACATGGCGACATGCTGCTTCGATGACAAGATGCCGTGGAGCAATTCGGGGATGTGCTCAGTTGAGAATTTAGGAACTTTCTACATTCGTTTGTGTTTGTACCAATGTAATTGAATTGTATTTTGGGTCTGGAAAATCTTCCCTTCCCATGGCTGCCTCTTTTTGTAATCTTTGGTCTTTGATGTTAAATCCAGAGGGCAGTATATGTTGATGGATGGCTCCTGGAATTTGGATTTCATAGGAACGGTCTACAGTCTAATAGTACATGAATATTGATTATTACGAATTAGTATGATGGGGGAGGGGTCCAAATTTTCATTTCTAAATACTTTAATCAAAAAGAATGATTTATTGGCATCC

mRNA sequence

ATGTTGACTGATCTGATTGACGGTCTCCCAGACGCTGTTGCCCATCAGTGCCTTGCACGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTTTTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTTTACGACCCCATCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGCTGGGTGGTGGCAGTGATGCTGTTGATCCGTTAACCGGTGATCAAGATAGAAACTTCGCAACCAATGAGGTGTGGTCATACGATCCTGTAATACGTCGGTGGTCTCAACGTGCATCAATGCTCATACCACGTGCCATGTTTGCTTGTGGTGTTTTAGAAGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAGTGACGTTTGGATTTCCCTGCCTGATCTACACCGTACTCACAATTCTGCTTGCACAGGAGTGGTGATTGGAGGCGAGTTGCATGTCTTGCACAAGGGAATATCAAAAGTGCAAATTTTAGACAGCCTGCGGCTTGAATGGAGAGTTGAAGAGTATGGTTGGCCCCAAGGTCCAATGGCTGTTGTTCAAGATTCACTTTATGTGATGGGTCATGGACATATTTTCAAGCACCACGGAAGAGAACCTAAAAAATATGTTATTTCAGCATCCGAATTTCGCCAACGAATAGGGTTTGCAATGATTAGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATTGGTCCCGACCGTTTGAATTGGCACATCAAGCCAACGTCAGATGTTGACATATTAACAACAGGAGGCGAGAGACCAACATGGCGACATGCTGCTTCGATGACAAGATGCCGTGGAGCAATTCGGGGATGTGCTCAGTTGAGAATTTAG

Coding sequence (CDS)

ATGTTGACTGATCTGATTGACGGTCTCCCAGACGCTGTTGCCCATCAGTGCCTTGCACGTGTTCCCTTCCACCTCTATCCAAAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCGTAGTGCTGAACTGTTTAGAGTTCGACAGGAGATTGGATCATCAGAAGATCTTTTATGCGTATGTGCATTTGAACCTGAGAATCTATGGCAGCTTTACGACCCCATCAGAGACCTTTGGATAACAATTCCTGTACTTCCATCGAGAATTAGGCATCTTGCACACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGCTGGGTGGTGGCAGTGATGCTGTTGATCCGTTAACCGGTGATCAAGATAGAAACTTCGCAACCAATGAGGTGTGGTCATACGATCCTGTAATACGTCGGTGGTCTCAACGTGCATCAATGCTCATACCACGTGCCATGTTTGCTTGTGGTGTTTTAGAAGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAGTGACGTTTGGATTTCCCTGCCTGATCTACACCGTACTCACAATTCTGCTTGCACAGGAGTGGTGATTGGAGGCGAGTTGCATGTCTTGCACAAGGGAATATCAAAAGTGCAAATTTTAGACAGCCTGCGGCTTGAATGGAGAGTTGAAGAGTATGGTTGGCCCCAAGGTCCAATGGCTGTTGTTCAAGATTCACTTTATGTGATGGGTCATGGACATATTTTCAAGCACCACGGAAGAGAACCTAAAAAATATGTTATTTCAGCATCCGAATTTCGCCAACGAATAGGGTTTGCAATGATTAGTTTGAGAGATGAAATTTACGTGATCGGAGGGGATATTGGTCCCGACCGTTTGAATTGGCACATCAAGCCAACGTCAGATGTTGACATATTAACAACAGGAGGCGAGAGACCAACATGGCGACATGCTGCTTCGATGACAAGATGCCGTGGAGCAATTCGGGGATGTGCTCAGTTGAGAATTTAG

Protein sequence

MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGDQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEMYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGPDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI*

Homology

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BLAST of CsaV3_6G037180 vs. NCBI nr
Match: XP_004140226.1 (F-box/kelch-repeat protein SKIP30 [Cucumis sativus] >XP_031744052.1 F-box/kelch-repeat protein SKIP30 [Cucumis sativus] >XP_031744053.1 F-box/kelch-repeat protein SKIP30 [Cucumis sativus] >XP_031744054.1 F-box/kelch-repeat protein SKIP30 [Cucumis sativus] >KGN47905.1 hypothetical protein Csa_002985 [Cucumis sativus])

HSP 1 Score: 731.9 bits (1888), Expect = 2.6e-207
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60
           MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120
           VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120

Query: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180
           DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE
Sbjct: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180

Query: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240
           MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP
Sbjct: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240

Query: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300
           QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG
Sbjct: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300

Query: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

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BLAST of CsaV3_6G037180 vs. NCBI nr
Match: XP_008449436.1 (PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo] >XP_008449437.1 PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo] >XP_008449439.1 PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo] >KAA0057314.1 F-box/kelch-repeat protein SKIP30 [Cucumis melo var. makuwa] >TYK13421.1 F-box/kelch-repeat protein SKIP30 [Cucumis melo var. makuwa])

HSP 1 Score: 722.2 bits (1863), Expect = 2.1e-204
Identity = 340/347 (97.98%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60
           MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120
           VCAFEPENLWQLYDPIRDLWITIPVLPS+IRHLAHFGAVSTAGKL+VLGGGSDAVDPLTG
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSKIRHLAHFGAVSTAGKLYVLGGGSDAVDPLTG 120

Query: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180
           DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE
Sbjct: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180

Query: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240
           MYDPD DVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQI DSL+LEWRVEEYGWP
Sbjct: 181 MYDPDKDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQIFDSLQLEWRVEEYGWP 240

Query: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300
           QGPMAVVQDSLYVMGHGHIFK+HGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG
Sbjct: 241 QGPMAVVQDSLYVMGHGHIFKYHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300

Query: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           PDRLNWH+KPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 PDRLNWHVKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]

BLAST of CsaV3_6G037180 vs. NCBI nr
Match: XP_038886961.1 (F-box/kelch-repeat protein SKIP30 [Benincasa hispida] >XP_038886962.1 F-box/kelch-repeat protein SKIP30 [Benincasa hispida] >XP_038886963.1 F-box/kelch-repeat protein SKIP30 [Benincasa hispida] >XP_038886964.1 F-box/kelch-repeat protein SKIP30 [Benincasa hispida])

HSP 1 Score: 667.5 bits (1721), Expect = 6.1e-188
Identity = 315/348 (90.52%), Postives = 331/348 (95.11%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           +++LIDGLPDAVA +CLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAFEPENLWQLYDP+RDLWITIPVLPS+IRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSKIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
           QDRNFATNEVWSYDPVIRRWSQRASML+PRAMFAC VL+GKIVVAGGFTSCRKSIS AEM
Sbjct: 121 QDRNFATNEVWSYDPVIRRWSQRASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISLAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDPD DVWISLPDLHRTH+SACTGVVIGGELHVLHKG+S VQI DSLRL WRV +YGWPQ
Sbjct: 181 YDPDKDVWISLPDLHRTHSSACTGVVIGGELHVLHKGLSAVQIFDSLRLGWRVIDYGWPQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHG--REPKKYVISASEFRQRIGFAMISLRDEIYVIGGDI 301
           GPMAV+Q SLYVM HG IFK+HG  +  KK V+SASEFRQRIGFAMI LRDEIYVIGGDI
Sbjct: 241 GPMAVIQGSLYVMSHGQIFKYHGEAKTVKKVVVSASEFRQRIGFAMIGLRDEIYVIGGDI 300

Query: 302 GPDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           GPDRLNWH+KPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 GPDRLNWHVKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348

[Close]

BLAST of CsaV3_6G037180 vs. NCBI nr
Match: XP_022963882.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kelch-repeat protein SKIP30 [Cucurbita maxima] >KAG6571462.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011226.1 F-box/kelch-repeat protein SKIP30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.4 bits (1661), Expect = 5.5e-181
Identity = 306/346 (88.44%), Postives = 323/346 (93.35%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           +++LIDGLPDAVA +CLARVPFHLYPKLELVS SW AAIRS+ELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAFEPENLWQLYDP+RDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
           QDRNFATNEVWSYDP+I RW QRASML+PRAMFAC VL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDPD DVWI LPDLH THNSACTGVVIGG+LHVLHKG+S VQILD ++LEWRVE+YGW Q
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPMAVVQ SLYVM HGHIFKH G E +K VISASEFRQRIGFAMI LRDEIYVIGGDIGP
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDG-EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGP 300

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKPTSDVDILTTGGERPTWRHAASMT+C GAIRGCA+LRI
Sbjct: 301 DRLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of CsaV3_6G037180 vs. NCBI nr
Match: XP_023511586.1 (F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643.3 bits (1658), Expect = 1.2e-180
Identity = 305/346 (88.15%), Postives = 322/346 (93.06%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           +++LIDGLPDAVA +CLARVPFHLYPKLELVS SW AAIRS+ELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAFEPENLWQLYDP+RDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
           QDRNFATNEVWSYDP+I RW QRASML+PRAMFAC VL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDPD DVWI LPDLH THNSACTGVVIGG+LHVLHKG+S VQI D ++LEWRVE+YGW Q
Sbjct: 181 YDPDKDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQIFDDVQLEWRVEDYGWLQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPMAVVQ SLYVM HGHIFKH G E +K VISASEFRQRIGFAMI LRDEIYVIGGDIGP
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDG-EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGP 300

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKPTSDVDILTTGGERPTWRHAASMT+C GAIRGCA+LRI
Sbjct: 301 DRLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 524.6 bits (1350), Expect = 8.4e-148
Identity = 239/346 (69.08%), Postives = 289/346 (83.53%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           ++ L+DG+P+AVA +CLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
            D  FAT++VWSYD V R+W+ RASML+PRAMFAC VL+GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDP++DVW S+PDLH+THNSAC+G+V+ G++HVLHKG+S VQ+L+S++L W V++YGWPQ
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPM VV+D LYVM HG +FK  G +  K V SASEF++RIG AM SL DE+ ++GG IGP
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEG-DTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGP 307

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKP SDVD LT G +RP WR  A MTRCRG I GC QL I
Sbjct: 308 DRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-30
Identity = 105/382 (27.49%), Postives = 160/382 (41.88%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVCAF 64
           +I GLPD +A +C+A++    +  LE VS  W+  +R A+    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 65  EPENLWQLYDPIRDLWITIPVLPSRIR------HLAHFGAVSTAGKLFVLGGGSDAVDPL 124
             +N W  YDP  D W  +P    R R      H + F  V  +  L V+ GG  A    
Sbjct: 68  RSKNQWVAYDPEADRWHPLP----RTRAVQDGWHHSGFACVCVSNCLLVI-GGCYAPSVS 127

Query: 125 TGDQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFT-SCRKSIS 184
           +    +   T +V  +DP  ++W   ASM  PR  FAC  + GK+ VAGG   +  + I 
Sbjct: 128 SFPHQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIP 187

Query: 185 QAEMYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGI-----SKVQILDSLRLEW 244
            AE+YDP +D W  LP + R     C+G+   G  HVL   +     +  ++ +   + W
Sbjct: 188 SAEVYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTW 247

Query: 245 RVEEYGWPQGPMAVVQDSLYVMGHGHIFK--------------------HHGREPKKYVI 304
              E  WP      +Q ++ VM +  ++                     + G  P   + 
Sbjct: 248 STVEDVWPFS--RAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLP 307

Query: 305 SASEFRQRIGFAMISLRDEIYVIGGDIGPDRLNWHIKPTSDVDI-------LTTGGERP- 346
           +     +  G+   +LR+E+YVIGG +    L W        DI       +    +RP 
Sbjct: 308 NHPRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPL 367

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.4e-23
Identity = 68/223 (30.49%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVC-- 64
           LI  LPD ++ Q LAR+P   Y  + LVS  W++A+ ++E++ +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 65  AFEPENLWQLYDPIRDLWITIPVLP----------------SRIRHLAHFGAV------- 124
             E + LW   DP+   W  +P +P                + I    + GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 125 -STAGKLFVLGGGSDAVDP---LTGDQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFA 184
             ++ ++   G    AVD    + G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 185 CGVLEGKIVVAGGFTSCRKSIS---QAEMYDPDSDVWISLPDL 196
            GVL  K+ V GG    R  +S    AE+YDP +D W  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 67/214 (31.31%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVCAF 64
           LI GLPD VA QCLA VP   +P +  V   W+  ++S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 65  E---PENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 124
                +N W++ D +     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 125 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 184
                A+ +V+ YD  +  WS+ A + + R  FAC  + G + V GG     +S+S AE+
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 185 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVL 216
           YDP++  W  +  L R     C      G+L+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 89/320 (27.81%), Postives = 138/320 (43.12%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLL-CVCA 64
           ++ GL D VA  CLA VP   YP L  V+  +   I S  LF +R+E+G  E L+  VC 
Sbjct: 49  VLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC- 108

Query: 65  FEPENLWQLYDPIRDLWITIPVLP-SRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGDQ 124
            +P   W ++ P++  W+ +P +P     + A   +++   +L V G             
Sbjct: 109 -DPRG-WLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFG------------- 168

Query: 125 DRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEMY 184
            R      +W Y    R W +   M  PR +FA G L G  +VAGG       ++ AE+Y
Sbjct: 169 -RELFQFAIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELY 228

Query: 185 DPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQI-------LDSLRLEWRVE 244
           D  S  W  LP++H +    C+G  + G+ +V+  G+S   +        D    +WR  
Sbjct: 229 DSSSGRWEMLPNMH-SPRRLCSGFFMDGKFYVI-GGMSSPNVSVTFGEEFDLETRKWRKI 288

Query: 245 EYGWPQGPMAVVQDSLYVMGHGHIF--KHHGREPKKY--VISASEFRQRI---------- 302
           E  +P    A     L V+ +  +F  ++     KKY  V +  E   R+          
Sbjct: 289 EGMYPNVNRAAQAPPLVVVVNNELFTLEYSTNMVKKYDKVKNKWEVMGRLPPMVDSSNGW 348

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL
Match: A0A0A0KDW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410600 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.3e-207
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60
           MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120
           VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120

Query: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180
           DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE
Sbjct: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180

Query: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240
           MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP
Sbjct: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240

Query: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300
           QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG
Sbjct: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300

Query: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL
Match: A0A1S3BM19 (F-box/kelch-repeat protein SKIP30 OS=Cucumis melo OX=3656 GN=LOC103491326 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.0e-204
Identity = 340/347 (97.98%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60
           MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120
           VCAFEPENLWQLYDPIRDLWITIPVLPS+IRHLAHFGAVSTAGKL+VLGGGSDAVDPLTG
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSKIRHLAHFGAVSTAGKLYVLGGGSDAVDPLTG 120

Query: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180
           DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE
Sbjct: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180

Query: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240
           MYDPD DVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQI DSL+LEWRVEEYGWP
Sbjct: 181 MYDPDKDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQIFDSLQLEWRVEEYGWP 240

Query: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300
           QGPMAVVQDSLYVMGHGHIFK+HGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG
Sbjct: 241 QGPMAVVQDSLYVMGHGHIFKYHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300

Query: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           PDRLNWH+KPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 PDRLNWHVKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL
Match: A0A5D3CNL2 (F-box/kelch-repeat protein SKIP30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00400 PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.0e-204
Identity = 340/347 (97.98%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60
           MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC
Sbjct: 1   MLTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLC 60

Query: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTG 120
           VCAFEPENLWQLYDPIRDLWITIPVLPS+IRHLAHFGAVSTAGKL+VLGGGSDAVDPLTG
Sbjct: 61  VCAFEPENLWQLYDPIRDLWITIPVLPSKIRHLAHFGAVSTAGKLYVLGGGSDAVDPLTG 120

Query: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180
           DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE
Sbjct: 121 DQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAE 180

Query: 181 MYDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWP 240
           MYDPD DVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQI DSL+LEWRVEEYGWP
Sbjct: 181 MYDPDKDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQIFDSLQLEWRVEEYGWP 240

Query: 241 QGPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300
           QGPMAVVQDSLYVMGHGHIFK+HGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG
Sbjct: 241 QGPMAVVQDSLYVMGHGHIFKYHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIG 300

Query: 301 PDRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           PDRLNWH+KPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI
Sbjct: 301 PDRLNWHVKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL
Match: A0A6J1HWH7 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 306/346 (88.44%), Postives = 323/346 (93.35%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           +++LIDGLPDAVA +CLARVPFHLYPKLELVS SW AAIRS+ELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAFEPENLWQLYDP+RDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
           QDRNFATNEVWSYDP+I RW QRASML+PRAMFAC VL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDPD DVWI LPDLH THNSACTGVVIGG+LHVLHKG+S VQILD ++LEWRVE+YGW Q
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPMAVVQ SLYVM HGHIFKH G E +K VISASEFRQRIGFAMI LRDEIYVIGGDIGP
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDG-EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGP 300

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKPTSDVDILTTGGERPTWRHAASMT+C GAIRGCA+LRI
Sbjct: 301 DRLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL
Match: A0A6J1HGE3 (F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 306/346 (88.44%), Postives = 323/346 (93.35%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           +++LIDGLPDAVA +CLARVPFHLYPKLELVS SW AAIRS+ELFRVRQEIGSSEDLLCV
Sbjct: 1   MSELIDGLPDAVALRCLARVPFHLYPKLELVSKSWLAAIRSSELFRVRQEIGSSEDLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAFEPENLWQLYDP+RDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSD VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDDVDPLTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
           QDRNFATNEVWSYDP+I RW QRASML+PRAMFAC VL G+IVVAGGFTSCRKSISQAEM
Sbjct: 121 QDRNFATNEVWSYDPIIHRWFQRASMLVPRAMFACCVLGGRIVVAGGFTSCRKSISQAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDPD DVWI LPDLH THNSACTGVVIGG+LHVLHKG+S VQILD ++LEWRVE+YGW Q
Sbjct: 181 YDPDRDVWIPLPDLHHTHNSACTGVVIGGKLHVLHKGLSTVQILDDVQLEWRVEDYGWLQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPMAVVQ SLYVM HGHIFKH G E +K VISASEFRQRIGFAMI LRDEIYVIGGDIGP
Sbjct: 241 GPMAVVQGSLYVMSHGHIFKHDG-EVRKVVISASEFRQRIGFAMIGLRDEIYVIGGDIGP 300

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKPTSDVDILTTGGERPTWRHAASMT+C GAIRGCA+LRI
Sbjct: 301 DRLNWDIKPTSDVDILTTGGERPTWRHAASMTKCCGAIRGCARLRI 345

[Close]

BLAST of CsaV3_6G037180 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 524.6 bits (1350), Expect = 5.9e-149
Identity = 239/346 (69.08%), Postives = 289/346 (83.53%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           ++ L+DG+P+AVA +CLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 120

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
            D  FAT++VWSYD V R+W+ RASML+PRAMFAC VL+GKIVVAGGFT+CRKSIS AEM
Sbjct: 121 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 180

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDP++DVW S+PDLH+THNSAC+G+V+ G++HVLHKG+S VQ+L+S++L W V++YGWPQ
Sbjct: 181 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 240

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPM VV+D LYVM HG +FK  G +  K V SASEF++RIG AM SL DE+ ++GG IGP
Sbjct: 241 GPMVVVEDVLYVMSHGLVFKQEG-DTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGP 300

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKP SDVD LT G +RP WR  A MTRCRG I GC QL I
Sbjct: 301 DRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of CsaV3_6G037180 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 524.6 bits (1350), Expect = 5.9e-149
Identity = 239/346 (69.08%), Postives = 289/346 (83.53%), Query Frame = 0


Query: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61
           ++ L+DG+P+AVA +CLA VP HL+P LELVS SW+AAIRS ELFRVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121
           CAF+PEN+WQ+Y P  D W+T+P+LPSRIRHLAHFGAV+TAG LFVLGGGSDAV P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181
            D  FAT++VWSYD V R+W+ RASML+PRAMFAC VL+GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241
           YDP++DVW S+PDLH+THNSAC+G+V+ G++HVLHKG+S VQ+L+S++L W V++YGWPQ
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301
           GPM VV+D LYVM HG +FK  G +  K V SASEF++RIG AM SL DE+ ++GG IGP
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEG-DTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGP 307

Query: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 348
           DRLNW IKP SDVD LT G +RP WR  A MTRCRG I GC QL I
Sbjct: 308 DRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of CsaV3_6G037180 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-24
Identity = 68/223 (30.49%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVC-- 64
           LI  LPD ++ Q LAR+P   Y  + LVS  W++A+ ++E++ +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 65  AFEPENLWQLYDPIRDLWITIPVLP----------------SRIRHLAHFGAV------- 124
             E + LW   DP+   W  +P +P                + I    + GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 125 -STAGKLFVLGGGSDAVDP---LTGDQDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFA 184
             ++ ++   G    AVD    + G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 185 CGVLEGKIVVAGGFTSCRKSIS---QAEMYDPDSDVWISLPDL 196
            GVL  K+ V GG    R  +S    AE+YDP +D W  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]

BLAST of CsaV3_6G037180 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 7.8e-24
Identity = 67/214 (31.31%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVCAF 64
           LI GLPD VA QCLA VP   +P +  V   W+  ++S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 65  E---PENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 124
                +N W++ D +     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 125 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 184
                A+ +V+ YD  +  WS+ A + + R  FAC  + G + V GG     +S+S AE+
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 185 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVL 216
           YDP++  W  +  L R     C      G+L+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

[Close]

BLAST of CsaV3_6G037180 vs. TAIR 10
Match: AT1G67480.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 7.8e-24
Identity = 67/214 (31.31%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 5   LIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCVCAF 64
           LI GLPD VA QCLA VP   +P +  V   W+  ++S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 65  E---PENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 124
                +N W++ D +     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLV-- 158

Query: 125 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 184
                A+ +V+ YD  +  WS+ A + + R  FAC  + G + V GG     +S+S AE+
Sbjct: 159 -----ASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 185 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVL 216
           YDP++  W  +  L R     C      G+L+V+
Sbjct: 219 YDPETCTWTFIESLRRP-RWGCFASAFNGKLYVM 242

The following BLAST results are available for this feature:

BLAST of CsaV3_6G037180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140226.1	2.6e-207	100.00	F-box/kelch-repeat protein SKIP30 [Cucumis sativus] >XP_031744052.1 F-box/kelch-...	[more]
XP_008449436.1	2.1e-204	97.98	PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo] >XP_008449437.1 PRED...	[more]
XP_038886961.1	6.1e-188	90.52	F-box/kelch-repeat protein SKIP30 [Benincasa hispida] >XP_038886962.1 F-box/kelc...	[more]
XP_022963882.1	5.5e-181	88.44	F-box/kelch-repeat protein SKIP30 [Cucurbita moschata] >XP_022967369.1 F-box/kel...	[more]
XP_023511586.1	1.2e-180	88.15	F-box/kelch-repeat protein SKIP30 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G037180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	8.4e-148	69.08	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	5.4e-30	27.49	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q9LM55	8.4e-23	30.49	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q9CAG8	1.1e-22	31.31	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
Q9FKJ0	1.2e-21	27.81	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]

BLAST of CsaV3_6G037180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDW8	1.3e-207	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410600 PE=4 SV=1	[more]
A0A1S3BM19	1.0e-204	97.98	F-box/kelch-repeat protein SKIP30 OS=Cucumis melo OX=3656 GN=LOC103491326 PE=4 S...	[more]
A0A5D3CNL2	1.0e-204	97.98	F-box/kelch-repeat protein SKIP30 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1HWH7	2.7e-181	88.44	F-box/kelch-repeat protein SKIP30 OS=Cucurbita maxima OX=3661 GN=LOC111466917 PE...	[more]
A0A6J1HGE3	2.7e-181	88.44	F-box/kelch-repeat protein SKIP30 OS=Cucurbita moschata OX=3662 GN=LOC111464058 ...	[more]

BLAST of CsaV3_6G037180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	5.9e-149	69.08	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	5.9e-149	69.08	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	6.0e-24	30.49	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	7.8e-24	31.31	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.2	7.8e-24	31.31	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 162..209 e-value: 4.7E-6 score: 36.1 coord: 104..161 e-value: 0.02 score: 24.0
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 150..195 e-value: 4.8E-10 score: 38.9 coord: 93..147 e-value: 5.4E-8 score: 32.3 coord: 280..332 e-value: 2.0E-4 score: 20.8
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 59..344 e-value: 8.6E-35 score: 122.1
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 62..331
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 4..347
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 4..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G037180.1	CsaV3_6G037180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding