CsaV3_6G031460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G031460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 17680824 .. 17683300 (+)
RNA-Seq ExpressionCsaV3_6G031460
SyntenyCsaV3_6G031460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGTTCAATTCTCATCCTAGTAACTTTGATCATTGGGTTATTAGCTCTTCTACTCAGTTGATTTCTCTTCATTTTAAAAGCTTACGGAACACTTGGTTTTCCACATAAATATTCTACACATATAAGGTTCACAATGAGGTTCAGACTTCAGCCTAACCTATTTGTGTGGGATTCAATCAATACTAACTTTATGTTCTTTCTTATCCTTCTTCAGAGAGTTGAAGTGATAATATCAAAGTAATTAGGTGGAAAAAATTTATCCGACATTCTTTTTCTGAGAGAATAATATAATATATTGACAAGGCCAAGGGAAACAATACCAGAAAATATGATGAGATCTCCTATTGAAAGGATAATAATGGTAGGTCCTTGACATTTCTATGGATATTGACAGAAAATAGCTCAGAATTAATTTGTACTACAATATAAACAGTGAAATTGCATTTACAGGTTACATGGAAATTTACAGTACTAAACCCCAAGCAACTTGAGAGGCTCCCAAAATTACTCTTCCAAATTCTTCCCATCCCTCTTCTCCATAATACTTTCTTACCTTTGTATTTATCTCTTTATTTATTATTGATTTTTGGATGAATTACCGAGCCAGATTTGTTGCTGAACCGTGGCGACCCTAGGGCAAGTTCTTTCAATCAAATAAGACTTCCATATATCGATCTTATCAAAAGATTTGTTGCTGAACCCCACAGAAAAATTTAAATTTAATAAGGGACCAAATATCACTTGCAGAACGCTCAAGCCTTTTAAAAATAAATATATTGTGCCTAATAATTACTGTAGTCCCACGAAACGTCCCCCTACATTATCTCACTGCTAATATCCTAATAATAAACCAAAGTTTTTCACACTAGTACAAAAGCCTTAAGGAGATTTTACTGTCTAAAGTACAAAAGCCTGAAAAATAGCCCTTAAACATAAGTTTCTTGGTTGAAAGTTTATTATATTTGATATGAGTGATAAAATATATGTCAAAGCTGTCATTAGCAATTTGCAAACTGAACACAACTCCCTTAAGGAGATTTGCATTAAAACAATTGCCACCGAGGAATTTGTTAACATCAAGAATGCGGTGATGAACCTGTTTTATTGACTAACATTAGGAGTAAGTTGAACCTGTTCGAATCCAATATACCCAACAGCTATTAGCCCCTTTCATTTTATGGACGTAAGTAGCAGGGTAAGCTTCTTTGCTGAAGTAAAAGCTGGTGCACTCTTCGGCAATATTATTTGAATTGAAGGGTCACGGAAAAGAATGCTGGAACCATGGTGCACTCTTGGACAGTTTTGTTTGAAATTGAAGGGTGACAGTGAAAATCATACTGGAACTTACAAAAGATCTGTTTGTGGTGGGTGGACAAAAATAAGTTGTATGTCAGGTTGTGCTACGTGGAAAATGTTCAATATATAGGGATTGGAATGCGGGTGTTACATTAGATGTGCCGAGAAGACCCTTTCAATGATGGATGGTTTGGAAACTTTCATTCAAACCAAAAGTAATTATTGTGGGTTGGCTCCTCTTGGGTTGTTGGGTTTTCTCTCTTTCAGTTGTTCTCCATGTGGACCATTTTGTCTTAGTATAGTTTTTTTTCCCTTTTAGAGACCAATAGCAATATCCTGGTTTTGCTTGTGCAGAGCTTGAACTTCTGAGTTCTTTGATCGGTTGACACAAAAATTGTGGTAAATTTAGTAATTTTGTGATCACCGAACTTCTTATTGGACAGTTGGTTGGCTCTTCTTACCAAATACATTATGTGTCAATGTCCAATTTGGTTAACACATGGCCATCAGATATATGCTGTCTTCTGATTTTTTATATTAGGCGAGTACTTATACCTGCTGTCACAATGAACGCCGAACAAGTAGTTGACTCATCCTGGTTGCAGTGGTGTGGTACAGTCAAAGGTCTCACATTGTTTCAGGAGCAATGTAAGAGTAGCACTAGGCACAGCTGTGGTTGAAGGAGCGAGCAAAATTGTTGCAGTAAACGAAGGCACTGATGAAAAGAGAGATTTGAACATTCAAGCACTTGATATTAAATGTGTATGAGATTCATTGAACTACTGTAAACTATAAATTGAAAGTGTCCTGGGACTAATTAATTCTATAAATATGGCATCGGTCATTTGTCAATTCAAATATTTGACATGTTTTTTTAAAAAAATGTTTATTGTCATTTTAAGTGAGACTGGAATATAATCTTCTATTTTGATTGCAAGTTCCCTCCCCTGTAAAATAATAATGCAACTTAAAACTATTTAGAAGCTGGCGTAATATTATTTATGTGGACAGAATTGTTTCATGGTGACAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

mRNA sequence

ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

Coding sequence (CDS)

ATGTCAACTATGAATGGCATAGTGATATTTAGCACCTCTTCAGGACAGAGCAAGAAGAAATTGATTGAAGCTGGCATACTCGTTGTGAGAGTCAAGCTCTCCTGTAGCTTGTTTAGAAGGCAAAGAGTTAACAAAGGAGAAAGGGCATGCTGA

Protein sequence

MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC*
Homology
[Close]
BLAST of CsaV3_6G031460 vs. NCBI nr
Match: KGN47530.1 (hypothetical protein Csa_019046 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 51
          MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC
Sbjct: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50

[Close]
BLAST of CsaV3_6G031460 vs. ExPASy TrEMBL
Match: A0A0A0KCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355980 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 51
          MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC
Sbjct: 1  MSTMNGIVIFSTSSGQSKKKLIEAGILVVRVKLSCSLFRRQRVNKGERAC 50

The following BLAST results are available for this feature:
BLAST of CsaV3_6G031460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47530.12.2e-17100.00hypothetical protein Csa_019046 [Cucumis sativus][more]
BLAST of CsaV3_6G031460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G031460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCY51.0e-17100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355980 PE=4 SV=1[more]
BLAST of CsaV3_6G031460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G031460.1CsaV3_6G031460.1mRNA