CsaV3_6G028460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G028460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr6: 16754642 .. 16755724 (-)
RNA-Seq ExpressionCsaV3_6G028460
SyntenyCsaV3_6G028460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATTGGCTTTTGCATTTTGCTCAAATGTTTTTGAGAGGTTGTGATGCTAATATCCACACGTTTACGCCATTAATAAAGGGTTGTTTCATGAGAGGGAAATTGTATGAAGCTCTTGACTTGTGGAAGCTTATGATACAAGATGGTTGTGAGCCAAATGTAGTTGCTTACAACACTCTGATTCATGGTCTTTGCAGTAACGGGAGTTTGGAAGAAGCCTTGCAAGTATGTGATCAGATGCAGAGGAGTGGCTGCCTTCCTAATGTGACTACTTACAGCATTCTAATTGATGGTTTCGCTAAAAGTGGTGATTTGGTCGGTGCATCCGAGACATGGAATAGGATGATATCTCATGGTTGTCGTCCTAATGTGGTGACTTATACTTGCATGGTGGATGTTCTTTGTAAAAACTCAATGTTTGACCAAGCCAATTCACTTGTGGAGAAGATGACTCTCGAAGGCTGTACTCCAAATACTATGACATTCAACACGTTTATCAAAGGTTTATGTGGAAATGGAAGAGTAGAATGGGCAATGAAACTGCTTGAACGAATGCAAGGACATGGGTGTCTTCCTAATATCACAACTTACAACGAGTTACTTGATGCTCTTTTCAGGATGAACAAGTATGAAGAGGCTTTTGGGCTATTTCAGGAAATTGAAGCAAGAAATTTACAGCCGAACTTAGTGACATATAATACCGTTTTATATGGTTTTTCTCGGGCTGGCATGATGGGGGAGGCGTTGCAGCTTTTTGGTAAAGCACTTGTTAGGGGAACTGCCCCTGATTCCATCACGTATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGATCGCAGCTCAATTGGTGGAACGAGTTAGTTCTATGAAGGAGTGGCATCCAGATATCATTACATACACTAGCCTCATTTGGGGTGCCTGCAATTGGATGAATATAGAAGAAGCCATGGCTTTTCTTGACAAGGCAATTAATCAAGGAATCTGTCCCAACTTTGCCACATGGAATGCATTAGTTCGGTGTTTCTTTCGACTCTTTAGGTCATATGGGACCAATTCATATTCTGGATGA

mRNA sequence

ATGTTGAATTGGCTTTTGCATTTTGCTCAAATGTTTTTGAGAGGTTGTGATGCTAATATCCACACGTTTACGCCATTAATAAAGGGTTGTTTCATGAGAGGGAAATTGTATGAAGCTCTTGACTTGTGGAAGCTTATGATACAAGATGGTTGTGAGCCAAATGTAGTTGCTTACAACACTCTGATTCATGGTCTTTGCAGTAACGGGAGTTTGGAAGAAGCCTTGCAAGTATGTGATCAGATGCAGAGGAGTGGCTGCCTTCCTAATGTGACTACTTACAGCATTCTAATTGATGGTTTCGCTAAAAGTGGTGATTTGGTCGGTGCATCCGAGACATGGAATAGGATGATATCTCATGGTTGTCGTCCTAATGTGGTGACTTATACTTGCATGGTGGATGTTCTTTGTAAAAACTCAATGTTTGACCAAGCCAATTCACTTGTGGAGAAGATGACTCTCGAAGGCTGTACTCCAAATACTATGACATTCAACACGTTTATCAAAGGTTTATGTGGAAATGGAAGAGTAGAATGGGCAATGAAACTGCTTGAACGAATGCAAGGACATGGGTGTCTTCCTAATATCACAACTTACAACGAGTTACTTGATGCTCTTTTCAGGATGAACAAGTATGAAGAGGCTTTTGGGCTATTTCAGGAAATTGAAGCAAGAAATTTACAGCCGAACTTAGTGACATATAATACCGTTTTATATGGTTTTTCTCGGGCTGGCATGATGGGGGAGGCGTTGCAGCTTTTTGGTAAAGCACTTGTTAGGGGAACTGCCCCTGATTCCATCACGTATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGATCGCAGCTCAATTGGTGGAACGAGTTAGTTCTATGAAGGAGTGGCATCCAGATATCATTACATACACTAGCCTCATTTGGGGTGCCTGCAATTGGATGAATATAGAAGAAGCCATGGCTTTTCTTGACAAGGCAATTAATCAAGGAATCTGTCCCAACTTTGCCACATGGAATGCATTAGTTCGGTGTTTCTTTCGACTCTTTAGGTCATATGGGACCAATTCATATTCTGGATGA

Coding sequence (CDS)

ATGTTGAATTGGCTTTTGCATTTTGCTCAAATGTTTTTGAGAGGTTGTGATGCTAATATCCACACGTTTACGCCATTAATAAAGGGTTGTTTCATGAGAGGGAAATTGTATGAAGCTCTTGACTTGTGGAAGCTTATGATACAAGATGGTTGTGAGCCAAATGTAGTTGCTTACAACACTCTGATTCATGGTCTTTGCAGTAACGGGAGTTTGGAAGAAGCCTTGCAAGTATGTGATCAGATGCAGAGGAGTGGCTGCCTTCCTAATGTGACTACTTACAGCATTCTAATTGATGGTTTCGCTAAAAGTGGTGATTTGGTCGGTGCATCCGAGACATGGAATAGGATGATATCTCATGGTTGTCGTCCTAATGTGGTGACTTATACTTGCATGGTGGATGTTCTTTGTAAAAACTCAATGTTTGACCAAGCCAATTCACTTGTGGAGAAGATGACTCTCGAAGGCTGTACTCCAAATACTATGACATTCAACACGTTTATCAAAGGTTTATGTGGAAATGGAAGAGTAGAATGGGCAATGAAACTGCTTGAACGAATGCAAGGACATGGGTGTCTTCCTAATATCACAACTTACAACGAGTTACTTGATGCTCTTTTCAGGATGAACAAGTATGAAGAGGCTTTTGGGCTATTTCAGGAAATTGAAGCAAGAAATTTACAGCCGAACTTAGTGACATATAATACCGTTTTATATGGTTTTTCTCGGGCTGGCATGATGGGGGAGGCGTTGCAGCTTTTTGGTAAAGCACTTGTTAGGGGAACTGCCCCTGATTCCATCACGTATAATACAATGATACATGCCTATTGCAAGCAGGGGAAGGTTAAGATCGCAGCTCAATTGGTGGAACGAGTTAGTTCTATGAAGGAGTGGCATCCAGATATCATTACATACACTAGCCTCATTTGGGGTGCCTGCAATTGGATGAATATAGAAGAAGCCATGGCTTTTCTTGACAAGGCAATTAATCAAGGAATCTGTCCCAACTTTGCCACATGGAATGCATTAGTTCGGTGTTTCTTTCGACTCTTTAGGTCATATGGGACCAATTCATATTCTGGATGA

Protein sequence

MLNWLLHFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG*
Homology
BLAST of CsaV3_6G028460 vs. NCBI nr
Match: KAE8637110.1 (hypothetical protein CSA_004587 [Cucumis sativus] >KAE8647150.1 hypothetical protein Csa_021771 [Cucumis sativus])

HSP 1 Score: 765.8 bits (1976), Expect = 1.7e-217
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0

Query: 1   MLNWLLHFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 60
           MLNWLLHFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT
Sbjct: 1   MLNWLLHFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 60

Query: 61  LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 120
           LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG
Sbjct: 61  LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 120

Query: 121 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 180
           CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM
Sbjct: 121 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 180

Query: 181 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 240
           KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF
Sbjct: 181 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 240

Query: 241 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 300
           SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD
Sbjct: 241 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 300

Query: 301 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG 360
           IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG
Sbjct: 301 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG 360

BLAST of CsaV3_6G028460 vs. NCBI nr
Match: XP_031745363.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g48810 [Cucumis sativus])

HSP 1 Score: 748.4 bits (1931), Expect = 2.8e-212
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN
Sbjct: 302 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 361

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY
Sbjct: 362 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 421

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG
Sbjct: 422 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 481

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE
Sbjct: 482 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 541

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI
Sbjct: 542 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 601

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG 361
           WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG
Sbjct: 602 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFRLFRSYGTNSYSG 653

BLAST of CsaV3_6G028460 vs. NCBI nr
Match: XP_031742794.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g48810-like [Cucumis sativus])

HSP 1 Score: 723.0 bits (1865), Expect = 1.3e-204
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0

Query: 8   FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 67
           FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS
Sbjct: 301 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 360

Query: 68  NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 127
           NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT
Sbjct: 361 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 420

Query: 128 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 187
           YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ
Sbjct: 421 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 480

Query: 188 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 247
           GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG
Sbjct: 481 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 540

Query: 248 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 307
           EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL
Sbjct: 541 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 600

Query: 308 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF
Sbjct: 601 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 640

BLAST of CsaV3_6G028460 vs. NCBI nr
Match: XP_016902287.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo] >XP_016902288.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo] >TYK02965.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-195
Identity = 323/339 (95.28%), Postives = 332/339 (97.94%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMI+DGCEPNVVAYNTLIHGLCS+
Sbjct: 303 AQMFSRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIRDGCEPNVVAYNTLIHGLCSS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSLEEALQV DQMQRSGC+PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV Y
Sbjct: 363 GSLEEALQVRDQMQRSGCVPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT+TFNTFIKGLCGNGRVEWAMKLLERMQG
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE RNLQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEERNLQPNLVTYNTILYGFSRAGMIGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW PDIITYT LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWQPDIITYTGLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGAC W+NIEEA+AFLDKAINQGICPNFATWNAL+RCFF
Sbjct: 603 WGACKWINIEEAIAFLDKAINQGICPNFATWNALIRCFF 641

BLAST of CsaV3_6G028460 vs. NCBI nr
Match: XP_038875460.1 (pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_038875461.1 pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_038875462.1 pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_038875463.1 pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_038875464.1 pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_038875465.1 pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida])

HSP 1 Score: 658.7 bits (1698), Expect = 2.9e-185
Identity = 305/339 (89.97%), Postives = 321/339 (94.69%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGCDANIHTFTPLIKGCFMRGK YEALDLWKLMIQDGC PNVVAYNTLIHGLC++
Sbjct: 303 AQMFSRGCDANIHTFTPLIKGCFMRGKFYEALDLWKLMIQDGCAPNVVAYNTLIHGLCNS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           G+LEEALQV DQMQR+GCLPNV TYS LIDGFAKSGDLVGASETWNRMISHGCRPNVV Y
Sbjct: 363 GTLEEALQVYDQMQRTGCLPNVITYSTLIDGFAKSGDLVGASETWNRMISHGCRPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMV+VLCKNSMFDQANS++EKM L GCTPNT+TFNTFIKGLCGNGRVEWAMK+L+RMQG
Sbjct: 423 TCMVEVLCKNSMFDQANSIMEKMILGGCTPNTVTFNTFIKGLCGNGRVEWAMKVLDRMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           HG LPNITTYNELLDALFRMNKYEEAFGLFQEIE R+LQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HGYLPNITTYNELLDALFRMNKYEEAFGLFQEIEERDLQPNLVTYNTILYGFSRAGMLGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLFGK LV GT PD ITYNT+IHAYCKQGKVKIAAQLVERVSSM EWHPDIITYTSLI
Sbjct: 543 ALQLFGKVLVDGTTPDPITYNTVIHAYCKQGKVKIAAQLVERVSSMNEWHPDIITYTSLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGACNW+NIEEA+AFL KAINQGICPNFATWN LVRCFF
Sbjct: 603 WGACNWINIEEAIAFLHKAINQGICPNFATWNVLVRCFF 641

BLAST of CsaV3_6G028460 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.9e-102
Identity = 175/340 (51.47%), Postives = 237/340 (69.71%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSN 69
           QM  RGC  NI+T + L+KGCF+RG  ++ALDLW  MI+  G +PNVVAYNTL+ G CS+
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365

Query: 70  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 129
           G++ +A+ V   M+  GC PN+ TY  LI+GFAK G L GA   WN+M++ GC PNVV Y
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425

Query: 130 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM-Q 189
           T MV+ LC++S F +A SL+E M+ E C P+  TFN FIKGLC  GR++WA K+  +M Q
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

Query: 190 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 249
            H C PNI TYNELLD L + N+ EEA+GL +EI  R ++ +  TYNT+L+G   AG+ G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545

Query: 250 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS-SMKEWHPDIITYTS 309
            ALQL GK +V G +PD IT N +I AYCKQGK + AAQ+++ VS   ++W PD+I+YT+
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605

Query: 310 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 347
           +IWG C     E+ +  L++ I+ GI P+ ATW+ L+ CF
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645

BLAST of CsaV3_6G028460 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 8.9e-60
Identity = 109/334 (32.63%), Postives = 189/334 (56.59%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           +M  R C  ++ T+T LI+       +  A+ L   M   GC P+VV YN L++G+C  G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            L+EA++  + M  SGC PNV T++I++     +G  + A +    M+  G  P+VVT+ 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            +++ LC+  +  +A  ++EKM   GC PN++++N  + G C   +++ A++ LERM   
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GC P+I TYN +L AL +  K E+A  +  ++ ++   P L+TYNTV+ G ++AG  G+A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           ++L  +   +   PD+ITY++++    ++GKV  A +       M    P+ +T+ S++ 
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTFNSIML 528

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C     + A+ FL   IN+G  PN  ++  L+
Sbjct: 529 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

BLAST of CsaV3_6G028460 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-57
Identity = 113/335 (33.73%), Postives = 191/335 (57.01%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSN 69
           QM   GC  +  +   ++ G    G++ +AL+ + ++  QDG  P+   +NTL++GLC  
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 70  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 129
           G ++ A+++ D M + G  P+V TY+ +I G  K G++  A E  ++MI+  C PN VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368

Query: 130 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 189
             ++  LCK +  ++A  L   +T +G  P+  TFN+ I+GLC       AM+L E M+ 
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 190 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 249
            GC P+  TYN L+D+L    K +EA  + +++E      +++TYNT++ GF +A    E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488

Query: 250 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 309
           A ++F +  V G + +S+TYNT+I   CK  +V+ AAQL++++  M+   PD  TY SL+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYTYNSLL 548

Query: 310 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
              C   +I++A   +    + G  P+  T+  L+
Sbjct: 549 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

BLAST of CsaV3_6G028460 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.6e-56
Identity = 106/334 (31.74%), Postives = 180/334 (53.89%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           Q+    C   + T+T LI+   + G + EAL L   M+  G +P++  YNT+I G+C  G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            ++ A ++   ++  GC P+V +Y+IL+      G      +   +M S  C PNVVTY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            ++  LC++   ++A +L++ M  +G TP+  +++  I   C  GR++ A++ LE M   
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GCLP+I  YN +L  L +  K ++A  +F ++      PN  +YNT+      +G    A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           L +  + +  G  PD ITYN+MI   C++G V  A +L+  + S  E+HP ++TY  ++ 
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC-EFHPSVVTYNIVLL 517

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C    IE+A+  L+  +  G  PN  T+  L+
Sbjct: 518 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

BLAST of CsaV3_6G028460 vs. ExPASy Swiss-Prot
Match: P0C7R3 (Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g64583 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.9e-55
Identity = 107/334 (32.04%), Postives = 176/334 (52.69%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           +M   G + +I TF  L+ G  +  ++ +A  L  LM++ G EPNVV YNTLI GLC NG
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            L  AL++ ++M++ G   +V TY+ L+ G   SG    A+     M+     P+VVT+T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            ++DV  K    D+A  L ++M      PN +T+N+ I GLC +GR+  A K  + M   
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GC PN+ TYN L+    +    +E   LFQ +       ++ TYNT+++G+ + G +  A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           L +F   + R   PD IT+  ++H  C  G+++ A    + +    E +  I+ Y  +I 
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE-SEKYIGIVAYNIMIH 430

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C    +E+A     +   +G+ P+  T+  ++
Sbjct: 431 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

BLAST of CsaV3_6G028460 vs. ExPASy TrEMBL
Match: A0A0A0KCK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324890 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.1e-205
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0

Query: 8   FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 67
           FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 68  NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 127
           NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVT 421

Query: 128 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 187
           YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 188 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 247
           GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 248 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 307
           EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSL 601

Query: 308 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF
Sbjct: 602 IWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641

BLAST of CsaV3_6G028460 vs. ExPASy TrEMBL
Match: A0A1S4E236 (pentatricopeptide repeat-containing protein At3g48810 OS=Cucumis melo OX=3656 GN=LOC103497775 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.5e-195
Identity = 323/339 (95.28%), Postives = 332/339 (97.94%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMI+DGCEPNVVAYNTLIHGLCS+
Sbjct: 303 AQMFSRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIRDGCEPNVVAYNTLIHGLCSS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSLEEALQV DQMQRSGC+PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV Y
Sbjct: 363 GSLEEALQVRDQMQRSGCVPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT+TFNTFIKGLCGNGRVEWAMKLLERMQG
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE RNLQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEERNLQPNLVTYNTILYGFSRAGMIGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW PDIITYT LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWQPDIITYTGLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGAC W+NIEEA+AFLDKAINQGICPNFATWNAL+RCFF
Sbjct: 603 WGACKWINIEEAIAFLDKAINQGICPNFATWNALIRCFF 641

BLAST of CsaV3_6G028460 vs. ExPASy TrEMBL
Match: A0A5D3BV38 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00490 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.5e-195
Identity = 323/339 (95.28%), Postives = 332/339 (97.94%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMI+DGCEPNVVAYNTLIHGLCS+
Sbjct: 303 AQMFSRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIRDGCEPNVVAYNTLIHGLCSS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSLEEALQV DQMQRSGC+PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV Y
Sbjct: 363 GSLEEALQVRDQMQRSGCVPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT+TFNTFIKGLCGNGRVEWAMKLLERMQG
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE RNLQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEERNLQPNLVTYNTILYGFSRAGMIGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW PDIITYT LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWQPDIITYTGLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGAC W+NIEEA+AFLDKAINQGICPNFATWNAL+RCFF
Sbjct: 603 WGACKWINIEEAIAFLDKAINQGICPNFATWNALIRCFF 641

BLAST of CsaV3_6G028460 vs. ExPASy TrEMBL
Match: A0A6J1EVI3 (pentatricopeptide repeat-containing protein At3g48810 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436965 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.9e-178
Identity = 293/339 (86.43%), Postives = 313/339 (92.33%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGC ANI TFTPLI+GCFMRG  YEAL+LWKLMI+DG EPNVVAYNTLIHGLC++
Sbjct: 303 AQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSL EALQVCDQM+RSGCLPNVTTYS LIDGFAK+GDLVGASETWNRMISHGC PNVV Y
Sbjct: 363 GSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RMQG
Sbjct: 423 TCMVDVLCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           H CLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEWHPDIITYTSLI
Sbjct: 543 ALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTSLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGACNW+NIEEA+ +L KA+NQGICPNFATWN LVRCFF
Sbjct: 603 WGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFF 641

BLAST of CsaV3_6G028460 vs. ExPASy TrEMBL
Match: A0A6J1EX52 (pentatricopeptide repeat-containing protein At3g48810 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436965 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.9e-178
Identity = 293/339 (86.43%), Postives = 313/339 (92.33%), Query Frame = 0

Query: 9   AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 68
           AQMF RGC ANI TFTPLI+GCFMRG  YEAL+LWKLMI+DG EPNVVAYNTLIHGLC++
Sbjct: 303 AQMFSRGCSANIQTFTPLIRGCFMRGGFYEALELWKLMIKDGYEPNVVAYNTLIHGLCNS 362

Query: 69  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 128
           GSL EALQVCDQM+RSGCLPNVTTYS LIDGFAK+GDLVGASETWNRMISHGC PNVV Y
Sbjct: 363 GSLVEALQVCDQMERSGCLPNVTTYSTLIDGFAKAGDLVGASETWNRMISHGCCPNVVAY 422

Query: 129 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 188
           TCMVDVLCKNSMFDQANS++EKMTLEGCTPNT+TFNTFIKGLC NGRVEWAMK+L+RMQG
Sbjct: 423 TCMVDVLCKNSMFDQANSIMEKMTLEGCTPNTVTFNTFIKGLCRNGRVEWAMKVLDRMQG 482

Query: 189 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 248
           H CLPNITTYNELLDALFR NKY EAFGLFQEIE  NLQPNLVTYNT+LYGFSRAGM+GE
Sbjct: 483 HRCLPNITTYNELLDALFRTNKYVEAFGLFQEIEKGNLQPNLVTYNTILYGFSRAGMLGE 542

Query: 249 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 308
           ALQLF K LV GT PD+ITYNTMIHAYCKQGKVK A QLVERV +MKEWHPDIITYTSLI
Sbjct: 543 ALQLFCKVLVGGTTPDAITYNTMIHAYCKQGKVKTAVQLVERVRTMKEWHPDIITYTSLI 602

Query: 309 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 348
           WGACNW+NIEEA+ +L KA+NQGICPNFATWN LVRCFF
Sbjct: 603 WGACNWINIEEAITYLHKAMNQGICPNFATWNVLVRCFF 641

BLAST of CsaV3_6G028460 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-103
Identity = 175/340 (51.47%), Postives = 237/340 (69.71%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSN 69
           QM  RGC  NI+T + L+KGCF+RG  ++ALDLW  MI+  G +PNVVAYNTL+ G CS+
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365

Query: 70  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 129
           G++ +A+ V   M+  GC PN+ TY  LI+GFAK G L GA   WN+M++ GC PNVV Y
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425

Query: 130 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM-Q 189
           T MV+ LC++S F +A SL+E M+ E C P+  TFN FIKGLC  GR++WA K+  +M Q
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

Query: 190 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 249
            H C PNI TYNELLD L + N+ EEA+GL +EI  R ++ +  TYNT+L+G   AG+ G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545

Query: 250 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS-SMKEWHPDIITYTS 309
            ALQL GK +V G +PD IT N +I AYCKQGK + AAQ+++ VS   ++W PD+I+YT+
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605

Query: 310 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 347
           +IWG C     E+ +  L++ I+ GI P+ ATW+ L+ CF
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645

BLAST of CsaV3_6G028460 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 6.3e-61
Identity = 109/334 (32.63%), Postives = 189/334 (56.59%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           +M  R C  ++ T+T LI+       +  A+ L   M   GC P+VV YN L++G+C  G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            L+EA++  + M  SGC PNV T++I++     +G  + A +    M+  G  P+VVT+ 
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            +++ LC+  +  +A  ++EKM   GC PN++++N  + G C   +++ A++ LERM   
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GC P+I TYN +L AL +  K E+A  +  ++ ++   P L+TYNTV+ G ++AG  G+A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           ++L  +   +   PD+ITY++++    ++GKV  A +       M    P+ +T+ S++ 
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTFNSIML 528

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C     + A+ FL   IN+G  PN  ++  L+
Sbjct: 529 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561

BLAST of CsaV3_6G028460 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-58
Identity = 113/335 (33.73%), Postives = 191/335 (57.01%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSN 69
           QM   GC  +  +   ++ G    G++ +AL+ + ++  QDG  P+   +NTL++GLC  
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 70  GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 129
           G ++ A+++ D M + G  P+V TY+ +I G  K G++  A E  ++MI+  C PN VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368

Query: 130 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 189
             ++  LCK +  ++A  L   +T +G  P+  TFN+ I+GLC       AM+L E M+ 
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 190 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 249
            GC P+  TYN L+D+L    K +EA  + +++E      +++TYNT++ GF +A    E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488

Query: 250 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 309
           A ++F +  V G + +S+TYNT+I   CK  +V+ AAQL++++  M+   PD  TY SL+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYTYNSLL 548

Query: 310 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
              C   +I++A   +    + G  P+  T+  L+
Sbjct: 549 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

BLAST of CsaV3_6G028460 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-57
Identity = 106/334 (31.74%), Postives = 180/334 (53.89%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           Q+    C   + T+T LI+   + G + EAL L   M+  G +P++  YNT+I G+C  G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            ++ A ++   ++  GC P+V +Y+IL+      G      +   +M S  C PNVVTY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            ++  LC++   ++A +L++ M  +G TP+  +++  I   C  GR++ A++ LE M   
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GCLP+I  YN +L  L +  K ++A  +F ++      PN  +YNT+      +G    A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           L +  + +  G  PD ITYN+MI   C++G V  A +L+  + S  E+HP ++TY  ++ 
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC-EFHPSVVTYNIVLL 517

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C    IE+A+  L+  +  G  PN  T+  L+
Sbjct: 518 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

BLAST of CsaV3_6G028460 vs. TAIR 10
Match: AT1G64583.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-56
Identity = 107/334 (32.04%), Postives = 176/334 (52.69%), Query Frame = 0

Query: 10  QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 69
           +M   G + +I TF  L+ G  +  ++ +A  L  LM++ G EPNVV YNTLI GLC NG
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190

Query: 70  SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 129
            L  AL++ ++M++ G   +V TY+ L+ G   SG    A+     M+     P+VVT+T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 130 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 189
            ++DV  K    D+A  L ++M      PN +T+N+ I GLC +GR+  A K  + M   
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 190 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 249
           GC PN+ TYN L+    +    +E   LFQ +       ++ TYNT+++G+ + G +  A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370

Query: 250 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 309
           L +F   + R   PD IT+  ++H  C  G+++ A    + +    E +  I+ Y  +I 
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE-SEKYIGIVAYNIMIH 430

Query: 310 GACNWMNIEEAMAFLDKAINQGICPNFATWNALV 344
           G C    +E+A     +   +G+ P+  T+  ++
Sbjct: 431 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8637110.11.7e-217100.00hypothetical protein CSA_004587 [Cucumis sativus] >KAE8647150.1 hypothetical pro... [more]
XP_031745363.12.8e-212100.00LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g48810 [Cucu... [more]
XP_031742794.11.3e-204100.00LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g48810-like ... [more]
XP_016902287.13.1e-19595.28PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Cucumis melo] ... [more]
XP_038875460.12.9e-18589.97pentatricopeptide repeat-containing protein At3g48810 [Benincasa hispida] >XP_03... [more]
Match NameE-valueIdentityDescription
Q9M3021.9e-10251.47Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
Q3EDF88.9e-6032.63Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9LFF12.4e-5733.73Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9SR001.6e-5631.74Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
P0C7R33.9e-5532.04Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KCK16.1e-205100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324890 PE=4 SV=1[more]
A0A1S4E2361.5e-19595.28pentatricopeptide repeat-containing protein At3g48810 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3BV381.5e-19595.28Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1EVI32.9e-17886.43pentatricopeptide repeat-containing protein At3g48810 isoform X1 OS=Cucurbita mo... [more]
A0A6J1EX522.9e-17886.43pentatricopeptide repeat-containing protein At3g48810 isoform X2 OS=Cucurbita mo... [more]
Match NameE-valueIdentityDescription
AT3G48810.11.3e-10351.47Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09900.16.3e-6132.63Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G53700.11.7e-5833.73Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G04760.11.1e-5731.74Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G64583.12.7e-5632.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 100..207
e-value: 2.5E-33
score: 117.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..84
e-value: 3.5E-22
score: 80.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 208..355
e-value: 2.1E-37
score: 131.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 228..277
e-value: 2.9E-14
score: 53.0
coord: 123..171
e-value: 8.5E-15
score: 54.7
coord: 53..102
e-value: 3.1E-20
score: 72.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 298..345
e-value: 8.4E-5
score: 22.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 22..51
e-value: 5.2E-5
score: 23.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 190..221
e-value: 5.5E-6
score: 26.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 126..160
e-value: 2.4E-8
score: 31.6
coord: 302..335
e-value: 4.8E-4
score: 18.1
coord: 92..125
e-value: 4.8E-9
score: 33.8
coord: 56..90
e-value: 1.9E-12
score: 44.6
coord: 197..229
e-value: 1.6E-6
score: 25.9
coord: 231..264
e-value: 2.2E-7
score: 28.6
coord: 162..195
e-value: 1.3E-9
score: 35.6
coord: 266..294
e-value: 4.6E-6
score: 24.5
coord: 21..55
e-value: 2.1E-8
score: 31.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 89..123
score: 12.221907
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 11.542307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..158
score: 11.73961
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 54..88
score: 14.074367
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 9.569272
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 19..53
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 159..193
score: 12.474017
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 229..263
score: 11.377887
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..294
score: 10.39137
NoneNo IPR availablePANTHERPTHR47932:SF18OS05G0132000 PROTEINcoord: 8..350
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 8..350
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 65..331

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G028460.1CsaV3_6G028460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding