CsaV3_6G023940 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G023940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UDP-glucuronate decarboxylase
Location	chr6: 15900778 .. 15901503 (+)
RNA-Seq Expression	CsaV3_6G023940
Synteny	CsaV3_6G023940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATTCTGAGCTTCTTCGAAGAAATCAATCCAATTCGTCTCCGGTGATCGATTCACCACGAACTCCGCCATCTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTCGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGTTTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAGAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGTTCATTATAAATTCAATCCTGTCAAGACAATCATATCCTTCTTGTTCTTCTTCCTCCATTTTCTTTTAATTTTCACCTTTTTCGTAACAAATTTTATTTCAAATCGTAATATCTTAATCTTAGGGCTACGGAATTAA

mRNA sequence

ATGAATAATTCTGAGCTTCTTCGAAGAAATCAATCCAATTCGTCTCCGGTGATCGATTCACCACGAACTCCGCCATCTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTCGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGTTTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAGAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGTTCATTATAAATTCAATCCTGTCAAGACAATCATATCCTTCTTGTTCTTCTTCCTCCATTTTCTTTTAATTTTCACCTTTTTCGTAACAAATTTTATTTCAAATCGTAATATCTTAATCTTAGGGCTACGGAATTAA

Coding sequence (CDS)

ATGAATAATTCTGAGCTTCTTCGAAGAAATCAATCCAATTCGTCTCCGGTGATCGATTCACCACGAACTCCGCCATCTTCTTCCGTCAAATCCAGGAGTCCGATCCGTTACATGCTTCGTGAGCAACGTCTTCTCTTTGTTTTCGTCGGTATCGCCATTGCAACTCTGTTTTTTAATGTCGTCCGTTTCACTTTTCCGCCGGAGTTACGTGATGATCATCACCGGGCGTTTAATTCGTTTGTTCGTTTGGATTCGACGATCCCGATGCGGAGAGTTTTGTATGAAACTCGCCGTGAAGGACCGTTAGGGCGGGTGAATTTGGCGGGGAGAGTTCCGCCGGGATTGACGAAGAGGAACTTGAGGATTGTTGTTACTGGTGGTGCTGGATTCGTTGGAAGCCATCTTGTGGACCGTTTGATTGAGAGAGGGGATAGCGTGATCGTTGTTGATAATTTCTTCACTGGACGGAAGGATAATCTGGTTCATCATTTTGGAAATCCGAGATTTGAACTGATTCGACACGACGTTGTTCAGCCGATTCTACTGGAAGTTGATCAGATCTATCACTTGGCTTGCCCTGCTTCTCCTGTTCATTATAAATTCAATCCTGTCAAGACAATCATATCCTTCTTGTTCTTCTTCCTCCATTTTCTTTTAATTTTCACCTTTTTCGTAACAAATTTTATTTCAAATCGTAATATCTTAATCTTAGGGCTACGGAATTAA

Protein sequence

MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLRN*

Homology

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BLAST of CsaV3_6G023940 vs. NCBI nr
Match: KGN47434.1 (hypothetical protein Csa_021708 [Cucumis sativus])

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-130
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR 240
           LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR
Sbjct: 181 LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

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BLAST of CsaV3_6G023940 vs. NCBI nr
Match: XP_031743802.1 (LOW QUALITY PROTEIN: UDP-glucuronic acid decarboxylase 2 [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 1.7e-112
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASPVHYKFNPVKTI 208
           LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 LLEVDQIYHLACPASPVHYKFNPVKTI 207

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BLAST of CsaV3_6G023940 vs. NCBI nr
Match: XP_008458422.1 (PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 196/208 (94.23%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MNNSELLRRNQSNSSP-VIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFN 60
           MNNS+LLRRNQSN SP VIDSPRTPP SS K+RSPIRYMLREQRLLFVFVGIAIATLFFN
Sbjct: 1   MNNSDLLRRNQSNPSPAVIDSPRTPPCSSCKTRSPIRYMLREQRLLFVFVGIAIATLFFN 60

Query: 61  VVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRN 120
           VVRFTFPPELRDDHHRA NSFVRL STIPMRRVLYETRREG LGRVNLAGRVPPGL  +N
Sbjct: 61  VVRFTFPPELRDDHHRALNSFVRLGSTIPMRRVLYETRREGSLGRVNLAGRVPPGLKNKN 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180
           LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180

Query: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208
           ILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208

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BLAST of CsaV3_6G023940 vs. NCBI nr
Match: XP_038875623.1 (UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 181/212 (85.38%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 3   NSELLRRNQSN-----SSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           NSELLRRNQ N      +PVIDSPRTP  SS KSRSPIRYMLREQRLLFVFVGIAIATLF
Sbjct: 2   NSELLRRNQPNPTPQTQNPVIDSPRTPAGSSCKSRSPIRYMLREQRLLFVFVGIAIATLF 61

Query: 63  FNVVRFTFPPELRDDH--HRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGL 122
           F+  RF FP ELRDDH    A N F++LDSTIPMRRVLYETRREG LGRVN AG+VPPGL
Sbjct: 62  FSFGRFAFPLELRDDHRYQSALNPFIQLDSTIPMRRVLYETRREGSLGRVNFAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+ +LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 182 VVESLLLEVDQIYHLACPASPVHYKFNPVKTI 213

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BLAST of CsaV3_6G023940 vs. NCBI nr
Match: XP_022959274.1 (UDP-glucuronic acid decarboxylase 4-like [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 5.3e-90
Identity = 175/212 (82.55%), Postives = 185/212 (87.26%), Query Frame = 0


Query: 3   NSELLRRNQSN-----SSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           NSEL RRNQSN      + VI  PRTP   S K RSPIRYMLREQRLLFVF+GIAIATL 
Sbjct: 2   NSELFRRNQSNPTLQTKNSVIGPPRTPAGCSSKFRSPIRYMLREQRLLFVFIGIAIATLL 61

Query: 63  FNVVRFTFPPELRDD--HHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGL 122
           FNVVR TFP ELRDD  +    N FVRLDS+IPMRRVLYETRREG LGRVN+AG+VPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYRAELNPFVRLDSSIPMRRVLYETRREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQI+HLACPASPVHYKFNPVKTI
Sbjct: 182 VVEPILLEVDQIFHLACPASPVHYKFNPVKTI 213

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BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot
Match: Q9LZI2 (UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-54
Identity = 119/212 (56.13%), Postives = 146/212 (68.87%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVR 63
           SEL+ R      P  D+    P         P+RYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI-- 62

Query: 64  FTFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGRVPPGL 123
             FP   +   +   F+ + +R D S +P      + +R+  L  +N      G++P GL
Sbjct: 63  --FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGL 122

Query: 124 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 183
            ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHD
Sbjct: 123 KRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 182

Query: 184 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 VVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

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BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot
Match: Q8S8T4 (UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-52
Identity = 120/214 (56.07%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV-- 63
           SEL  R      P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFS 62

Query: 64  -------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPP 123
                  + +   P L     R+ +S+  L +TI  +  +    R G  G     G++P 
Sbjct: 63  KSSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPL 122

Query: 124 GLTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIR 183
           GL ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IR
Sbjct: 123 GLKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIR 182

Query: 184 HDVVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           HDVV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 208

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BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot
Match: Q8VZC0 (UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-49
Identity = 113/196 (57.65%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 12  SNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFPPELRD 71
           S SSP   SP+T        RS + Y+ REQRLLF+ VGI I + FF +          +
Sbjct: 20  SQSSPY--SPKTLKHPRSLPRS-LHYLFREQRLLFILVGILIGSTFFILQPSLSRLGAAE 79

Query: 72  DHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNLRIVVTGGAGFV 131
                  S     +  P  R  + +   G  GR    GRVP G+ ++ LRIVVTGGAGFV
Sbjct: 80  STSLITRSVSYAVTDSPPSRSTFNSGGGG--GR---TGRVPVGIGRKRLRIVVTGGAGFV 139

Query: 132 GSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVDQIYHLA 191
           GSHLVD+LI RGD VIV+DNFFTGRK+NLVH F NPRFELIRHDVV+PILLEVDQIYHLA
Sbjct: 140 GSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILLEVDQIYHLA 199

Query: 192 CPASPVHYKFNPVKTI 208
           CPASPVHYK+NPVKTI
Sbjct: 200 CPASPVHYKYNPVKTI 207

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BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot
Match: Q9SN95 (UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-32
Identity = 63/90 (70.00%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 119 NLRIVVTGGAGFVGSHLVDRLIE-RGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVV 178
           N+RI+++GGAGF+GSHLVD+L+E   + VIV DN+FTG KDNL    G+PRFELIRHDV 
Sbjct: 28  NMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 87

Query: 179 QPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           +P+L+EVDQIYHLACPASP+ YK+NPVKTI
Sbjct: 88  EPLLIEVDQIYHLACPASPIFYKYNPVKTI 117

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BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot
Match: Q9ZV36 (UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.9e-32
Identity = 63/90 (70.00%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 119 NLRIVVTGGAGFVGSHLVDRLIE-RGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVV 178
           N+RI+VTGGAGF+GSHLVD+L++   + VIV DN+FTG KDNL    G+PRFELIRHDV 
Sbjct: 30  NMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT 89

Query: 179 QPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           +P+ +EVDQIYHLACPASP+ YK+NPVKTI
Sbjct: 90  EPLFVEVDQIYHLACPASPIFYKYNPVKTI 119

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BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL
Match: A0A0A0KF37 (UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_6G319800 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-130
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60
           MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV
Sbjct: 1   MNNSELLRRNQSNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNV 60

Query: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120
           VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL
Sbjct: 61  VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNL 120

Query: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180
           RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI
Sbjct: 121 RIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPI 180

Query: 181 LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR 240
           LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR
Sbjct: 181 LLEVDQIYHLACPASPVHYKFNPVKTIISFLFFFLHFLLIFTFFVTNFISNRNILILGLR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

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BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL
Match: A0A1S3C7Y3 (UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.3e-105
Identity = 196/208 (94.23%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MNNSELLRRNQSNSSP-VIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFN 60
           MNNS+LLRRNQSN SP VIDSPRTPP SS K+RSPIRYMLREQRLLFVFVGIAIATLFFN
Sbjct: 1   MNNSDLLRRNQSNPSPAVIDSPRTPPCSSCKTRSPIRYMLREQRLLFVFVGIAIATLFFN 60

Query: 61  VVRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRN 120
           VVRFTFPPELRDDHHRA NSFVRL STIPMRRVLYETRREG LGRVNLAGRVPPGL  +N
Sbjct: 61  VVRFTFPPELRDDHHRALNSFVRLGSTIPMRRVLYETRREGSLGRVNLAGRVPPGLKNKN 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180
           LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQP 180

Query: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208
           ILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208

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BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL
Match: A0A6J1H7L0 (UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.6e-90
Identity = 175/212 (82.55%), Postives = 185/212 (87.26%), Query Frame = 0


Query: 3   NSELLRRNQSN-----SSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           NSEL RRNQSN      + VI  PRTP   S K RSPIRYMLREQRLLFVF+GIAIATL 
Sbjct: 2   NSELFRRNQSNPTLQTKNSVIGPPRTPAGCSSKFRSPIRYMLREQRLLFVFIGIAIATLL 61

Query: 63  FNVVRFTFPPELRDD--HHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGL 122
           FNVVR TFP ELRDD  +    N FVRLDS+IPMRRVLYETRREG LGRVN+AG+VPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYRAELNPFVRLDSSIPMRRVLYETRREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KRNLRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRNLRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQI+HLACPASPVHYKFNPVKTI
Sbjct: 182 VVEPILLEVDQIFHLACPASPVHYKFNPVKTI 213

[Close]

BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL
Match: A0A6J1L4B9 (UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.5e-90
Identity = 173/212 (81.60%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 3   NSELLRRNQSN-----SSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLF 62
           NSEL RRNQSN      + VI  PRTP   S+K RSPIRYMLREQRLLFVF+G+AIATL 
Sbjct: 2   NSELFRRNQSNPTLQTHNSVIGPPRTPAGCSIKFRSPIRYMLREQRLLFVFIGVAIATLL 61

Query: 63  FNVVRFTFPPELRDD--HHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGL 122
           FNVVR TFP ELRDD  +  A N+FVRLDS+IPMRRVLYET REG LGRVN+AG+VPPGL
Sbjct: 62  FNVVRLTFPLELRDDQRYQAALNAFVRLDSSIPMRRVLYETHREGSLGRVNMAGKVPPGL 121

Query: 123 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 182
            KR LRIVVTGGAGFVGSHLVDRL+ERGD+VIVVDNFFTGRKDNLVHHFGNPRFELIRHD
Sbjct: 122 KKRILRIVVTGGAGFVGSHLVDRLMERGDNVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 181

Query: 183 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQI+HLACPASPVHYKFNPVKTI
Sbjct: 182 VVEPILLEVDQIFHLACPASPVHYKFNPVKTI 213

[Close]

BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL
Match: A0A6J1CA79 (UDP-glucuronate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111009636 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.1e-84
Identity = 166/202 (82.18%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 9   RNQSNSSP--VIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFP 68
           RNQ N+S   V D PR+P  SS KSR+PI+Y+LREQRLLFVFVG+AIATLFFNVVRF  P
Sbjct: 5   RNQPNASSQLVADPPRSPRGSSGKSRNPIQYVLREQRLLFVFVGVAIATLFFNVVRFVLP 64

Query: 69  PELRDDHHRA-FNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNLRIVVT 128
           PELRD    A  + FV L+STIP RRVLYETRREG LGRV   G+VPPGL KRNLRIVVT
Sbjct: 65  PELRDHPREAVLDPFVELESTIPTRRVLYETRREGGLGRVISPGKVPPGLRKRNLRIVVT 124

Query: 129 GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVD 188
           GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRK+NLVHH GNPRFELIRHDVVQPILLEVD
Sbjct: 125 GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENLVHHLGNPRFELIRHDVVQPILLEVD 184

Query: 189 QIYHLACPASPVHYKFNPVKTI 208
           QIYHLACPASPVHYKFNPVKTI
Sbjct: 185 QIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of CsaV3_6G023940 vs. TAIR 10
Match: AT3G62830.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 119/212 (56.13%), Postives = 146/212 (68.87%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVR 63
           SEL+ R      P  D+    P         P+RYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI-- 62

Query: 64  FTFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGRVPPGL 123
             FP   +   +   F+ + +R D S +P      + +R+  L  +N      G++P GL
Sbjct: 63  --FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGL 122

Query: 124 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 183
            ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHD
Sbjct: 123 KRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 182

Query: 184 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 VVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of CsaV3_6G023940 vs. TAIR 10
Match: AT3G62830.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-55
Identity = 119/212 (56.13%), Postives = 146/212 (68.87%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVR 63
           SEL+ R      P  D+    P         P+RYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI-- 62

Query: 64  FTFPPELRD-DHHRAFNSF-VRLD-STIPMRRVLYETRREGPLGRVN----LAGRVPPGL 123
             FP   +   +   F+ + +R D S +P      + +R+  L  +N      G++P GL
Sbjct: 63  --FPRSTQSTPYSDPFSGYGIRPDESYVP----AIQAQRKPSLEYLNRIGATGGKIPLGL 122

Query: 124 TKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHD 183
            ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IRHD
Sbjct: 123 KRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 182

Query: 184 VVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           VV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 VVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of CsaV3_6G023940 vs. TAIR 10
Match: AT2G47650.1 (UDP-xylose synthase 4 )

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-53
Identity = 120/214 (56.07%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV-- 63
           SEL  R      P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFS 62

Query: 64  -------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPP 123
                  + +   P L     R+ +S+  L +TI  +  +    R G  G     G++P 
Sbjct: 63  KSSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPL 122

Query: 124 GLTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIR 183
           GL ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IR
Sbjct: 123 GLKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIR 182

Query: 184 HDVVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           HDVV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 208

[Close]

BLAST of CsaV3_6G023940 vs. TAIR 10
Match: AT2G47650.2 (UDP-xylose synthase 4 )

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-53
Identity = 120/214 (56.07%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 4   SELLRRNQSNSSPVIDSPRTPPSSS-VKSRSPIRYMLREQRLLFVFVGIAIATLFFNV-- 63
           SEL  R      P  +S    P      +  PIRYMLREQRL+FV VGIAIATL F +  
Sbjct: 3   SELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTIFS 62

Query: 64  -------VRFTFPPELRDDHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPP 123
                  + +   P L     R+ +S+  L +TI  +  +    R G  G     G++P 
Sbjct: 63  KSSNHQPIPYDVDP-LSGYGMRSESSY--LPATIHKKPSIEYMSRIGSAG-----GKIPL 122

Query: 124 GLTKRNLRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIR 183
           GL ++ LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRK+N++HHF NP FE+IR
Sbjct: 123 GLKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIR 182

Query: 184 HDVVQPILLEVDQIYHLACPASPVHYKFNPVKTI 208
           HDVV+PILLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 183 HDVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 208

[Close]

BLAST of CsaV3_6G023940 vs. TAIR 10
Match: AT3G53520.1 (UDP-glucuronic acid decarboxylase 1 )

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-50
Identity = 113/196 (57.65%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 12  SNSSPVIDSPRTPPSSSVKSRSPIRYMLREQRLLFVFVGIAIATLFFNVVRFTFPPELRD 71
           S SSP   SP+T        RS + Y+ REQRLLF+ VGI I + FF +          +
Sbjct: 20  SQSSPY--SPKTLKHPRSLPRS-LHYLFREQRLLFILVGILIGSTFFILQPSLSRLGAAE 79

Query: 72  DHHRAFNSFVRLDSTIPMRRVLYETRREGPLGRVNLAGRVPPGLTKRNLRIVVTGGAGFV 131
                  S     +  P  R  + +   G  GR    GRVP G+ ++ LRIVVTGGAGFV
Sbjct: 80  STSLITRSVSYAVTDSPPSRSTFNSGGGG--GR---TGRVPVGIGRKRLRIVVTGGAGFV 139

Query: 132 GSHLVDRLIERGDSVIVVDNFFTGRKDNLVHHFGNPRFELIRHDVVQPILLEVDQIYHLA 191
           GSHLVD+LI RGD VIV+DNFFTGRK+NLVH F NPRFELIRHDVV+PILLEVDQIYHLA
Sbjct: 140 GSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILLEVDQIYHLA 199

Query: 192 CPASPVHYKFNPVKTI 208
           CPASPVHYK+NPVKTI
Sbjct: 200 CPASPVHYKYNPVKTI 207

The following BLAST results are available for this feature:

BLAST of CsaV3_6G023940 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47434.1	5.3e-130	100.00	hypothetical protein Csa_021708 [Cucumis sativus]	[more]
XP_031743802.1	1.7e-112	100.00	LOW QUALITY PROTEIN: UDP-glucuronic acid decarboxylase 2 [Cucumis sativus]	[more]
XP_008458422.1	1.3e-104	94.23	PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cucumis melo]	[more]
XP_038875623.1	1.8e-93	85.38	UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida]	[more]
XP_022959274.1	5.3e-90	82.55	UDP-glucuronic acid decarboxylase 4-like [Cucurbita moschata]	[more]

BLAST of CsaV3_6G023940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZI2	2.9e-54	56.13	UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1...	[more]
Q8S8T4	1.6e-52	56.07	UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2...	[more]
Q8VZC0	4.7e-49	57.65	UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1...	[more]
Q9SN95	3.1e-32	70.00	UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2...	[more]
Q9ZV36	6.9e-32	70.00	UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2...	[more]

BLAST of CsaV3_6G023940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF37	2.5e-130	100.00	UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_6G319800 PE=3 SV...	[more]
A0A1S3C7Y3	6.3e-105	94.23	UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1	[more]
A0A6J1H7L0	2.6e-90	82.55	UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3...	[more]
A0A6J1L4B9	7.5e-90	81.60	UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 S...	[more]
A0A6J1CA79	2.1e-84	82.18	UDP-glucuronate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111009636 PE=...	[more]

BLAST of CsaV3_6G023940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62830.1	2.0e-55	56.13	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G62830.2	2.0e-55	56.13	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47650.1	1.1e-53	56.07	UDP-xylose synthase 4	[more]
AT2G47650.2	1.1e-53	56.07	UDP-xylose synthase 4	[more]
AT3G53520.1	3.4e-50	57.65	UDP-glucuronic acid decarboxylase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 116..236 e-value: 1.7E-36 score: 128.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR43078:SF19	UDP-GLUCURONIC ACID DECARBOXYLASE 4	coord: 4..209
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 124..206 e-value: 4.3E-12 score: 46.1
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 4..209
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 118..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G023940.1	CsaV3_6G023940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042732	D-xylose metabolic process
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0048040	UDP-glucuronate decarboxylase activity