CsaV3_6G016900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G016900
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 12612125 .. 12612293 (-)
RNA-Seq ExpressionCsaV3_6G016900
SyntenyCsaV3_6G016900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCATCGAGCAAGAAAAAAATTTGGTGACTTTCTGGAAGAATCCCGAAACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGAATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCGTGAGCGCTAACTTATTGG

mRNA sequence

AGCATCGAGCAAGAAAAAAATTTGGTGACTTTCTGGAAGAATCCCGAAACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGAATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCGTGAGCGCTAACTTATTGG

Coding sequence (CDS)

AGCATCGAGCAAGAAAAAAATTTGGTGACTTTCTGGAAGAATCCCGAAACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGAATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCGTGAGCGCTAACTTATTGG

Protein sequence

SIEQEKNLVTFWKNPETGKVVKWRLVRCADFLKNRAIKNLIKIPSHLRQFVSANLLX
Homology
[Close]
BLAST of CsaV3_6G016900 vs. NCBI nr
Match: KAE8646969.1 (hypothetical protein Csa_020592, partial [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 6.6e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  SIEQEKNLVTFWKNPETGKVVKWRLVRCADFLKNRAIKNLIKIPSHLRQFVSANLL 57
          SIEQEKNLVTFWKNPETGKVVKWRLVRCADFLKNRAIKNLIKIPSHLRQFVSANLL
Sbjct: 1  SIEQEKNLVTFWKNPETGKVVKWRLVRCADFLKNRAIKNLIKIPSHLRQFVSANLL 56

The following BLAST results are available for this feature:
BLAST of CsaV3_6G016900 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646969.16.6e-23100.00hypothetical protein Csa_020592, partial [Cucumis sativus][more]
BLAST of CsaV3_6G016900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G016900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G016900 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G016900.1CsaV3_6G016900.1mRNA