CsaV3_6G015770 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G015770
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	MADS-box transcription factor
Location	chr6: 11768855 .. 11777768 (+)
RNA-Seq Expression	CsaV3_6G015770
Synteny	CsaV3_6G015770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGTCACTTTTTGAGAGAACCTTTTATGGGGAACCCATTTCTTAACTTTTTCCCATACCATGAAGAAATGGATGTGGCTAATGGGACTTTGAAAGTGAACCCTAAAACATTATATATCTCTCAATTTAATTTTTTTATTTAATTTTTTTTTATAACTTCTTTACATTATTGCTCTTTCCTTCTAATTAGATCATTAATTCATTGATTAACCCTCTTTAATTTCACACCAAGAAAATAGTAATATGGAAGATCAATTTTCAATTTACTTTTCTACTTTAAATACTCTTCCCTCTAAACCTAACCCCACACATAGCTTCTTCTTCTTCCACTTCTCTTCACTAAAATCTAATCTTCCCTTTTTTTTTTCTTCTTTTACTTCATCTCACCAAAGGTTTGTTAATTTTTCTTCATACCCCATCTTCAAAGTTTGAAACTTTACATCAGTTTTTTTTATAGATCTACTGATAAAAATCAAAACCAATCTTTTAGTGTTTTTTTTTTTTAATTTATTTTTTGTTGGGGGATTATTAATTTAGATTTCAACCACGGAGTTCCCAAATCAAAGTGGAGAAGGATCTGCCTCTTCCCAAAAAAAAATGGGAAGAGGTAAGATTGAAATAAAAAGAATTGAAAATACTACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGATTGCTTAAAAAAGCTTATGAGCTGTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTACTCGTGGTCGTCTCTACGAATACGCAAATAATAGGTAATTTCTTCTTCTTCCTCCTTCTCTATTTCATTATCTATCGCCATAAATTTTCATTTCTTTCAAAAAAGCACAATTTTTTACAACCATTTTTTTTATTTTATTTTTTTAAAATTGAGAGGATTGATTAATTGAAAATTAATTGATGGGGTAATTTAATTATTTTCCATTTTGTTTCTTAAATTTTGAAATTATTTTCCTACAATTCTGAGCTACCTGTTTATACAGATCTATGATTTAATGAATGACTATGAAGTGGAGTCGTTGGCTAAAACTTAAAGCTTAGGGTTTTACCAAGGAATTTCATTCTTCTTTTAAGATTTTTTTTTTAAAAAAATCTTTTAGGGTTTTGTTTTGTTATTTGTTATTTGTTTGTTTTTAATTTTAATTTTAATTTTTGGGTACAAATGTCATCCATTTATAAGTTCGTCAGCCTAAGCTGTCTTTTGACAGAAGATGATGGTGTCATCGACTTGATTTATTTCCATTTTTGACCCTTTCTTCCATTACTTTTAATGTTGGTACTCAACTGACCTTGGAAAAATTATAAATTTTTGCAAAGGGGTTGGTTAGATATTGTTCGACTTTAACTGGGTTTTTTTTCTAAAGAAAAGAAAATTTTGATTATCTATGTTTTACATTAATCTCTTTCTTTAAGGGTGATTTAGTAAATTATGCTCATATTACGTGTGAAAATTTGAATATAATCTCCAAGAAAAAGAAAAGTGAAGTTATGATTCAGTTTTGGAGAAGAGTTTCTGATGAAATTGATTTGGAATCAAACTCTTCGAGTTATAATTTTGTTTATTCTATGTTTGGTTTCTTGTTCTGGATAAACATATTACTTTTTTGAAATATAAATTTTAAGTGATTTTTCATGAAACCTTTGGCGTAATATACCATATTTTGTGGTTTATTAATTGAACAACTTTTTTTCTTTTTTTTTTTTCTTTTTGATAATTGTCTTATGTTTGGTTTCAATTTTAGAAGTTTAGTAGATATTTTCTTTTCATATTTACTATGTTATGAAAAAGACATTGAATCATTTAATTGAAATACTAAAACTAAATTAAAGACGTAATTTCCATAATTTGTTTACAAATATTTTATTATTATTATAATCTTAATAAACCAAAGTTTAAAATAGTTCTATCCAATTGGTGGTAGAATTTAGTTTTATTATAGGTTGGTTTATTTAAGTTAATTGGTTAAAACATGTATATCCTCCTAACTTTTAAATTAAGAACATTGAATATACCAAAAAATATCATAAATAAAAACATTAAAATTATAACTCTCTACCATTTGTGCAATTCTAATTTGTACAAGTGATCAGTAATACTATATGGCACAGAAATGATAAAAGTATTAGAAAACAAAGTTAAGATTTTGTGTTAACAACTTATTACATAATTAGATTGATTGAATAATGGTAATTTATTAGTAAAATTTTTGTGGGTTGTACAATAAATAAATGAAGAATGGTAGTGTACCATAATGATAATATAATATTTGCAAAAATGAAGAAGGGTGTGACCCTCTTAACTTTAATTTGTAGCATAAAAATAGAAAAAGTTGATAAAATAGCTTCCTATTGCTAAAAAAATGTTCATATTTCATCACTTTCAAACCCTTTCTTCTCTTTAGTCAACTCAGAAGTGATATTTCATTAATCAAATCCGACAACCAAATATTGTATTGCCACCATTATTCTAATTCATCATTTTTATTTTTATTTTTATTTTATGTTTTTGAGATGGGATGGGATGAGTAAAAGAGAAAGTGGGGGGAAATTTGAAATTTTCAATTTGAAATAATATTTTTTGATTTTAGGATTATGAAAGTGAAAGGGGAAAATGAGTGTATTTTCATTTTCTTTTTGCAATTGGAAGAGAGAATCATTTCTATTTCTATGAAACTTTGATCCTTTCCCTTCTCTTTACGCTAAATTAGGCCTTTTTAAAAAATTGGGTTTTGAAACCCACAAGAACCTTACCATATACTTCGATACTGGAAAATAGACTTTGAGTTTCTCAAATGTAAAATCTAGATTTTGAAAGTATTGAAGTTTAGCAAATGTTTTGTGTGCTTGGTCTTAATAATAGTTACATAATAATGTCAAATATTAAAAAATTTATATTCTTTATCAGTAACTTCCCTCTTATAAATTTAAATCGTTTAGAAAAATCTACCCACTACATTACAATAGCCTCACTTAATAATTCTTTCTCCTAGTTAAACCACATTCTTTTAATATAGATTATTGAACCTCCTAACACTTTTGAATGAATAATGTTCATACCAACTACTATTAAACTAAGTTCACTTTAGCAAACATAAACTAGACTTGAAGAAACCAAATGCATGCACTAAACGATTGATTTGGAGAAAATACAAATGAACGAGGAAGAAGTGTAGGGTTGAGAGTGATATTTGAAACCACAAAAATGAAATGATTAAAAAAAAGATGTTGTAATGTGATTTGAAGTATTTAAAAAGGATTTGTTGGAAAGGCATATTATTGAAAAGGAGAAGAGGAAGAGAGAAATGAGGATTTAGGTTTAGGGCTAAGTATTATATCCAATGAACAAAGGGAAAATGAGGAGTATGTTAATAGAAAGATTTTAAGAAAATAGTATGTATATTTATGTGGTAATAATGGATGAAATTCTGTGGGATTTTCTGACTCCCAATCAGCCTCGACGAAACTAAGGTATCACACGCCACCACTCACTTTCTTGGAATCCATAAACCCTTTTTTTTCCCTTCTAAATCCATTGGTTCTTAGGTATGTTTCTCTTTCTTTTCATATAATATTTGTATGAACAAATCAAAATTATCATTTAACTATCTACTTCCACATTATAATTGGATATATACTAAGAGTAATATATTTTGAATTGTACTGATCATCTGTTTAAATACGTTATAAATTGGATACTTGTGAAAAGTGAAAGGTTGTGAATGGATTGATTGTGTTTTAAAATGAGTAAAAAAAATGACAGTGTTAGAGGAACGATTGAGAGGTACAAGAAAGCATTTGCTGATTCTTCCAATTCCGGATTATCAGTTGCCGAAGCTAATGTACAGGTAATTCATTTCTTATTTTCCTTTCATACACACACACATATATGTACACTTTTTCTTTTCCTTTTTTTGGCTCCTTAGGATCCATTCATAAACACTTTTAATATGATTAATCAACTGTCTATACAAATGTATGGAATCTATTCTCCTGCTTACCTCAAAGCATACTACTACATTCTATAATGCATTGCTTTGGGCAGTCCCAACGCCATGACCATCTTCATCATATTTCCATCTTTCTCACGCTAAGAAATTCAAAGGAACAAAACTTATGAGAAAAATGTGAAACCACAACCAAATAAATTTAGCATCCGTTTTGGAATGACTTAAGAAAAAAATGTTTTCTAAAAAATGCATTTTTATTTAAACATATTTTTCTAAAAACTCCTTGAAAGAAAAATGCATGTGTGTTTGACAACTTTTTTTTCAAAAGTGTTTTTAGGTAAAAATTTGTTTGATTTGTAATAGAGTAAAAGATTTATATATATATATATATAGAATTTGTCAGTGGATATTTTGATAGAAGGGACAACGATCATTGAGGATGTTGGTTTGAGGTGGTCTGGGACAGTTACCGTAAAATGATAATCAAAGGTTGGCAACCGTGGTCAGTGGAAGTCAAACGATGACAATTATCACAAAAAAAAAATAGTTGTTGGCAGTTAGTCAATAACAGTCCTAGAAAACTGATTGACAAAAGTTGATCGCTAACAGTTACCATAGAACAATCGACAAAAATAAGTCAATGGTAAAAAAAATGACAGATGAAAGTTGATAGCCAACGAAAAACGGTGAAAGAAAATTTGGCTAACGACATACAGGGATGGTTGTCAAAGGTTGGTTGGTGAAGATAGTTGAAGATATTGGTCTGATTGTTTCATACAAATTAGGGAGATTAACCATTAAGCACACAAAATCTATTTTACTAAAAGTTGGTTTTATGTGTTTATCCTAACCCAGGTTATTTTATAAATTTATTTTTTCAAAATTTATTTTAGGTGGTTGCCAAACACATAGTCTTTTCTCCAAAACAATTTTTTTTTTTAATTTAATAACTTGAAAATGCAATCGAGACACACCTTTATTGTGCACAGTAGAGATGGTCATCGCATTAGGGCTTCGATACACATGGTCAATGTGATAGAGCATTCTTGCATAAGCATAAATTTAAATTTCATACATTTGTAAAAGGTCGGTCATTTAATCATAAAGGCACCTTTGAATGAGTTATCCGTTTAAAAATTTCTATATATGGCTTTTGAAAATTATTATGATTTTTCTTACAATTCTTTTATGATCGTTTCATCTTGTTGTTTAAGAAATACTTACATGTAGTTTGATAATTATTTGGTTTTTCGTTTTTAGTTTTTGAACCTTGTACTTGTTTCACATCAAATCGTTAAAAATGATTTCCATCATTCTCTATCATACCTATCTCGTGTGTTTTCCATCTCTCTACTACAAAATAAAAAAATGGAAAACTATTTTTTTTAATTACTTAAATAAAATTTGTGAGATGAAGAGGTGCAAAAGCATTGAGACATAAAATGCACCCAAGTTATTTTAGATCTTATTGGATATTGGATCAACATATTTAATCAAGTTTTAGAAACAAAAACTTTTACGAAAATTTCTTTAGCTTTTTTAAATGAAGCGGTTTTGTTCGGTTTTAGAATCGGTTTAAAACATTAAACTGAATCGAACCGTATAAGAAACGATTTCAACATAACACAAATTGCATACAATTGATGTCGGTTCAGTTTGGTTTGTCAAATTGGTTCGATTTTAAAATATTTTATGAACACCCTTACTCGTTATAAGCTTAGCTTTTTCATCAAAAACTGAAAGCAAAAATTCAAGTAGTTAAAGAAAGGGAGTTGAAAAACTTGTTCCGGAAAGTTTAGTTGTTTCATCCAATTTCTAATTACATAAGATCATATTTTCTTAAGAAACACATTCCTTCATAATCAAATTTCAAGAATCAAAGTAAATTTTCAAAACCATCAGTACAGTTACGTTTTTTAAAACAGTGCTAGAAATTGATTAAATAATAAAGAATATATTAGTGTACATAGACTTCTTAAATATATTTGAAATAAGTTCTACTTTTTTCAAGTACAAAATACAACTCTTTCTCTGATCTCTAAAGCCAACTTCCAAACAATTTATTAAAATATATTTACACCAAAGAAAAGTATATTTTTGTACAAAATTTTGACTCATGTACAACTCCTAATTTTAACAATCCAAAAAATACGGGTTTTGTAGGTAATAAAAATCTAAATTCTAAACCCTAAACTTTAACATTATACTCTTTTAGCAACCATTTCTTTGCTTTTTCTTTCTAAATTAAACTTCTTTCCTTTCTTCCTACACTAATTTGTTTTTATCAATTGTTGAAGGTAGATAACAAAAAGAAGAAAGTTGAGGGGACAAGAGTGTCTATAGACTTAAATTTTCAAAAACAAAATAGTTACCGAATGAAGTTTTAAGATTTTGCCCTTCCCAAACGGGTTTTATGATTTTGCATCATGGCAATATTTCATTTTTAGTTCTTTTAAATCTGTGTTCGCATCTTTTCAATTTTAAATATGATTTTTACCGTTGTTAAACATTTGAACTTTTAATCCAATTTGAGGAGGGAGGGAGGGAGAGGAGGGAGGGAGGGGAGTTCTTAAAATTACTCTTTCTTGGTTGGTAAAATTATATACTATTAGTTTTTATAAGATTCATGTGTGAAAAACTTAGTGTTTTCTGAAAAGAATAGAAGCGATGATCAAATGATCTATGGGCAGATGAGTGCCTTTGTATAATATCTGTTTTCTTCTTCCTTGGCTCTTCTCCAACCCTTGATGTTTTGCCCTTTTTTTATATTTATTGACAGACCATTTCTTGTATAATTTATTGATATATTTAACTCGAATGAAGTTGGGATATAATGAGGGTGTTGCCAGGTATCTAACGTAGTTGGGATTCTTTTGCCATATCTTGTAATTTTTTTATGCTCTATGGAACGATATTGTCACTCCTGTAGTTAGTGTACTAAATCTAATACTTTCTTTTTTGTAATTATGATGTTTATACTATTCCTCTCTGCTGGAAGGTTCTTCTCTAGTTTCTGATAAGATTTTAAACTCAAGAGAAAATGAAATACGAAATCTTGGGGGCGATGATATTCGATATTTATATGTTATGTTGTAATGTTAATGTTATGACCTCAAATGAAACATTCCAGTTTTACCAACAAGAAGCCACCAAGTTGAAGAGACAGATTAGGGAAATTCAGAACTCAAACAGGTTGTTTGGTTAATTCAAAATATTCTAAACACTACACACACACACAAAATTACCCAAAAAAACAACCCTTTAGTTTGGTATTAATTTAATTACCTTCATCAGGCATATCCTGGGAGAAGCACTCAGCTCATTGCCATTAAAAGAGCTCAAAAGTCTTGAGGGCAGATTGGAGAGAGGTATCAGCAAAGTTAGGGCTAAAAAGGTCTCTCCCATTTTCAACTCTCTCATTTTGATTTCTCTTCTGTCTTGAAGTAGGGGAGTCCCACATGTTAAATCTCTCTAGCTAACATGATTTTCTCTCCTTTCAATCCTCATTGCATTCCAAATATTTATATATGATCGAACTACATTTCTTTATCAAGTATATTCTAATTTTGTGTTCCTGTATCAAAGTAGGAAGTTTTGTGTTTGTTTGTGTTGAAGAAGCGTATTGATATCATAAATCTCATTGATTTATGCTTTTGAGTTGAATGGTAGCGATTTAGAGTATGCTTGTTCTATGAGTTTATATATATTTATATACAAATTTTAAAAAATAACATTATTTTCATGTCAATCAACAAAATAGATGTATATATACAGCACTATTTTTCATCACCCGTTACAAATTGCTCGTTCATATCAAATAAATTTATAAACGACCATCCTTCATTTATGTGTGCAGAACGAAACCTTGTTTGCAGAAATGGAATTCATGCAAAAAAGGGTACGTATAACTAACAAAGATTCGTTAAAAAATATAAAGTACTTTTAAACATTTAGAAAATCCTTTATCTTGAACATATCCATTCTCTCTCTCTTTTGTAAACTATAATTAAGCATTTTTCGGTGCAGGAAATGGAACTTCAGAGCCACAATAACTATCTGAGAACACAGGTTAAATTCTCACCTTTTATCCAAAACACTTTGGAGTTTATTTCAATTATGATATTTATTCATCAACTTTCAATATTTCCAAAACTTACTTTGCACTTTTCATTTTTCTCCATTTAAAATAAGGTGGATCGATGCAACAGTTAACAGTTAATACATGAAAATTGAAAGAGACATGTGACATCATTTTCAGCATCATTCATGTAAACTGATGTGACATATAGGCAATTTTTATTATTAACGATGTTGAAAATCTTTTGTATGATCTTAAATAATACTGTGGTCTTTCTAATTTTTATACAAGCATCAAGAGAATATCTCACATGGTATTAGACTAAATGTATATCGCAGGGCTTCCTAGCTAATAGAAAAGCTCATATTATTATTGGAGGGAGTAGTCCTCCCTTGTAAACTCGGGTCAACTAGGACTACAATTTTGGAAATTAAATGTTAAGCTCTAGTCTTTCTTTATACGTCTTAAGTACTTGTAAAGTATCTAATTTGGGTATAAACCTGTGTTGTTGTAAAATGTTATTCTAATGAATAAGACCATAATTGAAATAAAGTCGAATGTTAGAGAGATATCTGGTATAATTTAACCTAAAAAGAGAAACATAACCAATATGTTTTGTGGGTTTGTATAGATTGCAGAACACGAAAGAATACAACAGCAGCAGCAGCAACAACAGCAAACGAACATGATGCAAAGGGCAACATATGAGAGTGTGGGAGGGCAATATGATGATGAGAATAGAAGTACTTATGGGGCTGTAGGGGCGCTTATGGATTCAGACAGCCATTATGCTCCTCAAGACCATCTCACTGCCCTTCAGCTTGTTTAAAATTTATAACCCTCCCCCCCCCCCCCCCCCCCCCCC

mRNA sequence

ATGGGAAGAGGTAAGATTGAAATAAAAAGAATTGAAAATACTACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGATTGCTTAAAAAAGCTTATGAGCTGTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTACTCGTGGTCGTCTCTACGAATACGCAAATAATAGTGTTAGAGGAACGATTGAGAGGTACAAGAAAGCATTTGCTGATTCTTCCAATTCCGGATTATCAGTTGCCGAAGCTAATGTACAGTTTTACCAACAAGAAGCCACCAAGTTGAAGAGACAGATTAGGGAAATTCAGAACTCAAACAGGCATATCCTGGGAGAAGCACTCAGCTCATTGCCATTAAAAGAGCTCAAAAGTCTTGAGGGCAGATTGGAGAGAGGTATCAGCAAAGTTAGGGCTAAAAAGAACGAAACCTTGTTTGCAGAAATGGAATTCATGCAAAAAAGGGAAATGGAACTTCAGAGCCACAATAACTATCTGAGAACACAGATTGCAGAACACGAAAGAATACAACAGCAGCAGCAGCAACAACAGCAAACGAACATGATGCAAAGGGCAACATATGAGAGTGTGGGAGGGCAATATGATGATGAGAATAGAAGTACTTATGGGGCTGTAGGGGCGCTTATGGATTCAGACAGCCATTATGCTCCTCAAGACCATCTCACTGCCCTTCAGCTTGTTTAA

Coding sequence (CDS)

ATGGGAAGAGGTAAGATTGAAATAAAAAGAATTGAAAATACTACAAATCGTCAAGTCACCTTTTGCAAGAGAAGAAATGGATTGCTTAAAAAAGCTTATGAGCTGTCTGTTCTTTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTACTCGTGGTCGTCTCTACGAATACGCAAATAATAGTGTTAGAGGAACGATTGAGAGGTACAAGAAAGCATTTGCTGATTCTTCCAATTCCGGATTATCAGTTGCCGAAGCTAATGTACAGTTTTACCAACAAGAAGCCACCAAGTTGAAGAGACAGATTAGGGAAATTCAGAACTCAAACAGGCATATCCTGGGAGAAGCACTCAGCTCATTGCCATTAAAAGAGCTCAAAAGTCTTGAGGGCAGATTGGAGAGAGGTATCAGCAAAGTTAGGGCTAAAAAGAACGAAACCTTGTTTGCAGAAATGGAATTCATGCAAAAAAGGGAAATGGAACTTCAGAGCCACAATAACTATCTGAGAACACAGATTGCAGAACACGAAAGAATACAACAGCAGCAGCAGCAACAACAGCAAACGAACATGATGCAAAGGGCAACATATGAGAGTGTGGGAGGGCAATATGATGATGAGAATAGAAGTACTTATGGGGCTGTAGGGGCGCTTATGGATTCAGACAGCCATTATGCTCCTCAAGACCATCTCACTGCCCTTCAGCTTGTTTAA

Protein sequence

MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQQQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV*

Homology

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BLAST of CsaV3_6G015770 vs. NCBI nr
Match: KGN47049.2 (hypothetical protein Csa_020772 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
           PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ
Sbjct: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 236

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BLAST of CsaV3_6G015770 vs. NCBI nr
Match: NP_001292697.1 (floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 5.7e-121
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
           PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLR QIAEHERIQQ
Sbjct: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRAQIAEHERIQQ 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 236

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BLAST of CsaV3_6G015770 vs. NCBI nr
Match: XP_038900672.1 (agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900675.1 agamous-like MADS-box protein MADS1 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.7e-110
Identity = 223/236 (94.49%), Postives = 229/236 (97.03%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLR QIAEHERI Q
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-Q 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQRATYE+VGGQYDD+NRS YGAVG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYETVGGQYDDQNRS-YGAVG-LMDSDTHYAHQDHLTALQLV 233

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BLAST of CsaV3_6G015770 vs. NCBI nr
Match: KAG6570568.1 (Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 218/236 (92.37%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLR QIAEHERI Q
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-Q 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQLV 233

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BLAST of CsaV3_6G015770 vs. NCBI nr
Match: XP_022944555.1 (floral homeotic protein AGAMOUS-like [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 8.9e-106
Identity = 217/236 (91.95%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLR QIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-P 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQLV 233

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BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.3e-79
Identity = 170/237 (71.73%), Postives = 194/237 (81.86%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVR TIERYKK  +DSSN+G SV+EAN QFYQQEA+KL+RQIR+IQN NRHILGEALSSL
Sbjct: 61  SVRTTIERYKKVCSDSSNTG-SVSEANAQFYQQEASKLRRQIRDIQNLNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LE RLE+GIS++R+KKNE LFAE+E+MQKRE+ELQ+ N +LR QIAE+ER QQ
Sbjct: 121 NFKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSNLFLRAQIAENERAQQ 180

Query: 181 QQQQQQQTNMMQRATYESVGGQ-YDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           Q       N+M  + YESV  Q YD +N         L+D + HY+  D  TALQLV
Sbjct: 181 QM------NLMPGSQYESVPQQPYDSQNLLPVN----LLDPNHHYSRHDQ-TALQLV 225

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot
Match: Q43585 (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.3e-74
Identity = 153/236 (64.83%), Postives = 194/236 (82.20%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANN
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SV+ TIERYKKA +DSSN+G S++EAN Q+YQQEA+KL+ QI  +QN NR++LGE+L++L
Sbjct: 77  SVKATIERYKKACSDSSNTG-SISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAAL 136

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            L++LK+LE ++E+GISK+R+KKNE LFAE+E+MQKRE++L ++N YLR +IAE ER QQ
Sbjct: 137 SLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQ 196

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQ   M   ++YE V   +  + R+     G  + +++HY  QD   +LQLV
Sbjct: 197 QQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNG--LQTNNHYTRQDQ-PSLQLV 248

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot
Match: P29381 (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.9e-72
Identity = 156/238 (65.55%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKA +D+ N   SV EAN Q+YQQEA+KL+RQIR+IQNSNRHI+GE+L SL
Sbjct: 76  SVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ +N YLR +IAE  R+  
Sbjct: 136 NFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL-- 195

Query: 181 QQQQQQQTNMMQRAT-YESVGGQYDDENRSTYGAVGA-LMDSDSHYAPQDHLTALQLV 237
               QQ+++++Q  T YES    +D         +   L++ +  ++ QD    LQLV
Sbjct: 196 -NPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQLV 248

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot
Match: Q40885 (Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.9e-69
Identity = 148/236 (62.71%), Postives = 186/236 (78.81%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEYANN
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SV+ TIERYKKA +DSSN+G S+AEAN Q+YQQEA+KL+ QI  +QN NR+ LGE+L++L
Sbjct: 77  SVKATIERYKKACSDSSNTG-SIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAAL 136

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            L++L++LE ++E+GISK+RAKKNE LFAE+E+MQKRE++L ++N YLR +IAE ER   
Sbjct: 137 NLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETER--- 196

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
               QQ   M   ++Y+ V  Q   + R+     G  + +++HY  QD    LQLV
Sbjct: 197 ---SQQMNLMPGSSSYDLVPPQQSFDARNYLQVNG--LQTNNHYPRQDQ-PPLQLV 242

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot
Match: P29385 (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.2e-68
Identity = 155/238 (65.13%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKA +D+ N   ++ EAN Q+YQQEA+KL+RQIR+IQN NRHILGE+L SL
Sbjct: 76  SVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LE RLE+GIS+VR+KK+E L AE+E+MQKRE+ELQ+ N YLR++I E   +QQ
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQ 195

Query: 181 QQQQ--QQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           Q+     Q T      T     GQY   NR+ Y AV  L++ + + + QD    LQLV
Sbjct: 196 QESSVIHQGTVYESGVTSSHQSGQY---NRN-YIAVN-LLEPNQNSSNQDQ-PPLQLV 246

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL
Match: A0A0A0KC22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.3e-122
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 82  MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 141

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL
Sbjct: 142 SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 201

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
           PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ
Sbjct: 202 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 261

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV
Sbjct: 262 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 317

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL
Match: Q9ARE9 (MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
           PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLR QIAEHERIQQ
Sbjct: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRAQIAEHERIQQ 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 236

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL
Match: A0A6J1FYQ9 (floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC111448972 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.3e-106
Identity = 217/236 (91.95%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA+KLKRQIREIQNSNRHILGEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEASKLKRQIREIQNSNRHILGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            LK+LKSLEGRLERGISKVRAKKNETL AEMEFMQKREMELQ+HNNYLR QIAEHERI  
Sbjct: 121 SLKDLKSLEGRLERGISKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIAEHERI-P 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQQQQQTNMMQR TYE+VGG   +ENRS YG VG LMDSD+HYA QDHLTALQLV
Sbjct: 181 QQQQQQQTNMMQRGTYETVGGGQYEENRS-YGGVG-LMDSDTHYAHQDHLTALQLV 233

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL
Match: A0A6J1D8F2 (agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC111017982 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.4e-94
Identity = 199/245 (81.22%), Postives = 207/245 (84.49%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSV EANVQFYQQEA+KLKRQIREIQNSNRHI+GEALSSL
Sbjct: 61  SVRGTIERYKKAFADSSNSGLSVEEANVQFYQQEASKLKRQIREIQNSNRHIVGEALSSL 120

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
            LK+LKSLEGRLERGI+KVRAKKNETL AEMEFMQKREMELQ+HNNYLR QI EHERI+Q
Sbjct: 121 SLKDLKSLEGRLERGITKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQIGEHERIRQ 180

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGA-------LMDSD-SHYA-PQDHLT 237
           QQ Q           YES   QYD+     YGA  A       LMDSD +HY   QDHLT
Sbjct: 181 QQMQ-----------YESAATQYDENENRGYGAAAAVAAAAVGLMDSDNNHYGHAQDHLT 234

[Close]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL
Match: A0A1S3C3D0 (floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL
Sbjct: 10  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 69

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
           PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKRE+ELQSHNNYLR QIAEHERIQQ
Sbjct: 70  PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREVELQSHNNYLRAQIAEHERIQQ 129

Query: 181 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQL 236
           QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQ+
Sbjct: 130 QQQQQQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQV 184

[Close]

BLAST of CsaV3_6G015770 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.8e-73
Identity = 156/238 (65.55%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKA +D+ N   SV EAN Q+YQQEA+KL+RQIR+IQNSNRHI+GE+L SL
Sbjct: 76  SVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ +N YLR +IAE  R+  
Sbjct: 136 NFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL-- 195

Query: 181 QQQQQQQTNMMQRAT-YESVGGQYDDENRSTYGAVGA-LMDSDSHYAPQDHLTALQLV 237
               QQ+++++Q  T YES    +D         +   L++ +  ++ QD    LQLV
Sbjct: 196 -NPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQLV 248

[Close]

BLAST of CsaV3_6G015770 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 261.2 bits (666), Expect = 8.3e-70
Identity = 155/238 (65.13%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKA +D+ N   ++ EAN Q+YQQEA+KL+RQIR+IQN NRHILGE+L SL
Sbjct: 76  SVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LE RLE+GIS+VR+KK+E L AE+E+MQKRE+ELQ+ N YLR++I E   +QQ
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQ 195

Query: 181 QQQQ--QQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           Q+     Q T      T     GQY   NR+ Y AV  L++ + + + QD    LQLV
Sbjct: 196 QESSVIHQGTVYESGVTSSHQSGQY---NRN-YIAVN-LLEPNQNSSNQDQ-PPLQLV 246

[Close]

BLAST of CsaV3_6G015770 vs. TAIR 10
Match: AT3G58780.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 258.8 bits (660), Expect = 4.1e-69
Identity = 156/263 (59.32%), Postives = 188/263 (71.48%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  S-------------------------VRGTIERYKKAFADSSNSGLSVAEANVQFYQQEA 120
           S                         VRGTIERYKKA +D+ N   SV EAN Q+YQQEA
Sbjct: 76  SFIYLLLEKKKKKKKKKNLWIYSSHVVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEA 135

Query: 121 TKLKRQIREIQNSNRHILGEALSSLPLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQ 180
           +KL+RQIR+IQNSNRHI+GE+L SL  KELK+LEGRLE+GIS+VR+KKNE L AE+E+MQ
Sbjct: 136 SKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQ 195

Query: 181 KREMELQSHNNYLRTQIAEHERIQQQQQQQQQTNMMQRAT-YESVGGQYDDENRSTYGAV 237
           KREMELQ +N YLR +IAE  R+      QQ+++++Q  T YES    +D         +
Sbjct: 196 KREMELQHNNMYLRAKIAEGARL---NPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYI 255

[Close]

BLAST of CsaV3_6G015770 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 256.1 bits (653), Expect = 2.7e-68
Identity = 155/240 (64.58%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
           SVRGTIERYKKA +D+ N   ++ EAN Q+YQQEA+KL+RQIR+IQN NRHILGE+L SL
Sbjct: 76  SVRGTIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKR--EMELQSHNNYLRTQIAEHERI 180
             KELK+LE RLE+GIS+VR+KK+E L AE+E+MQKR  E+ELQ+ N YLR++I E   +
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKEIELQNDNMYLRSKITERTGL 195

Query: 181 QQQQQQ--QQQTNMMQRATYESVGGQYDDENRSTYGAVGALMDSDSHYAPQDHLTALQLV 237
           QQQ+     Q T      T     GQY   NR+ Y AV  L++ + + + QD    LQLV
Sbjct: 196 QQQESSVIHQGTVYESGVTSSHQSGQY---NRN-YIAVN-LLEPNQNSSNQDQ-PPLQLV 248

[Close]

BLAST of CsaV3_6G015770 vs. TAIR 10
Match: AT3G58780.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 253.1 bits (645), Expect = 2.3e-67
Identity = 149/238 (62.61%), Postives = 181/238 (76.05%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FSTRGRLYEYANN
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SVRGTIERYKKAFADSSNSGLSVAEANVQFYQQEATKLKRQIREIQNSNRHILGEALSSL 120
                  RYKKA +D+ N   SV EAN Q+YQQEA+KL+RQIR+IQNSNRHI+GE+L SL
Sbjct: 76  -------RYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSL 135

Query: 121 PLKELKSLEGRLERGISKVRAKKNETLFAEMEFMQKREMELQSHNNYLRTQIAEHERIQQ 180
             KELK+LEGRLE+GIS+VR+KKNE L AE+E+MQKREMELQ +N YLR +IAE  R+  
Sbjct: 136 NFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARL-- 195

Query: 181 QQQQQQQTNMMQRAT-YESVGGQYDDENRSTYGAVGA-LMDSDSHYAPQDHLTALQLV 237
               QQ+++++Q  T YES    +D         +   L++ +  ++ QD    LQLV
Sbjct: 196 -NPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQ-PPLQLV 241

The following BLAST results are available for this feature:

BLAST of CsaV3_6G015770 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47049.2	1.5e-121	100.00	hypothetical protein Csa_020772 [Cucumis sativus]	[more]
NP_001292697.1	5.7e-121	99.58	floral homeotic protein AGAMOUS [Cucumis sativus] >CAC37399.1 MADS1 protein [Cuc...	[more]
XP_038900672.1	2.7e-110	94.49	agamous-like MADS-box protein MADS1 [Benincasa hispida] >XP_038900673.1 agamous-...	[more]
KAG6570568.1	1.8e-106	92.37	Agamous-like MADS-box protein MADS1, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022944555.1	8.9e-106	91.95	floral homeotic protein AGAMOUS-like [Cucurbita moschata]	[more]

BLAST of CsaV3_6G015770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XH4	7.3e-79	71.73	Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=...	[more]
Q43585	9.3e-74	64.83	Floral homeotic protein AGAMOUS OS=Nicotiana tabacum OX=4097 GN=AG1 PE=2 SV=1	[more]
P29381	3.9e-72	65.55	Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana OX=3702 GN=AGL1 PE=1 ...	[more]
Q40885	6.9e-69	62.71	Floral homeotic protein AGAMOUS OS=Petunia hybrida OX=4102 GN=AG1 PE=1 SV=1	[more]
P29385	1.2e-68	65.13	Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana OX=3702 GN=AGL5 PE=1 ...	[more]

BLAST of CsaV3_6G015770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC22	7.3e-122	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G177190 PE=4 SV=1	[more]
Q9ARE9	2.8e-121	99.58	MADS1 protein OS=Cucumis sativus OX=3659 GN=m1 PE=2 SV=1	[more]
A0A6J1FYQ9	4.3e-106	91.95	floral homeotic protein AGAMOUS-like OS=Cucurbita moschata OX=3662 GN=LOC1114489...	[more]
A0A6J1D8F2	8.4e-94	81.22	agamous-like MADS-box protein AGL1 OS=Momordica charantia OX=3673 GN=LOC11101798...	[more]
A0A1S3C3D0	1.6e-84	98.29	floral homeotic protein AGAMOUS OS=Cucumis melo OX=3656 GN=LOC103496392 PE=4 SV=...	[more]

BLAST of CsaV3_6G015770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58780.1	2.8e-73	65.55	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	8.3e-70	65.13	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.3	4.1e-69	59.32	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.2	2.7e-68	64.58	K-box region and MADS-box transcription factor family protein	[more]
AT3G58780.2	2.3e-67	62.61	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..145
None	No IPR available	COILS	Coil	Coil	coord: 81..108
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..228
None	No IPR available	PANTHER	PTHR11945:SF150	AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED	coord: 1..228
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 72.99 coord: 38..59 score: 64.02 coord: 23..38 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 9.4E-42 score: 154.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 2.5E-26 score: 90.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.963795
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 87..172 e-value: 5.3E-25 score: 87.4
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 88..178 score: 14.581303
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..76 e-value: 3.3E-28 score: 99.2
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..73
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..78 e-value: 2.53817E-45 score: 144.232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G015770.1	CsaV3_6G015770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding