
CsaV3_6G013990 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAGGTTAATGCAGTCACTTTCCTTTGTCCTTCCTCAAAAGAGTGGACCTAGAGAGAGAGAAGAAAGAAGAAGAAGAAGGAATTAAGAATTAGCAGCGTCAATATTTTTTTGTTCCTTTGCAGTGGCAGTGGCAGTGGCAGTGCAGCCTATATATTTAACCACACCACACATCCCTTCTTTCTTCACCAACTTCATACCTCACCACAAAATCAAAAACACTGACTCTGAGGCACACTCTCTTCTTTAATGGAGATGGAGAATCAACCCAAATCACCCATTTTCAAGAGGATTTGTGTTTTCTGTGGTAGCAGCCCTGGCAAGAAAACTAGTTATAAAGATGCTGCCATTGAACTTGGAAAAGAACTTGTAATATCTCTCTTTCCTCTGTTTCCCCCCCCCCCCCCCCCCCCCAACTCTGTTTTTTGTTATGTTCATCTCTTCTCTTATTCATTTCGGATTCTGGGTTATCGATTGAAAAGGGGTTTGGATTTTGGACTGATTTTCACTTTTTTTTGGTTGGTGGTTTAGGTTTCGAGAGATATTGATCTGGTTTACGGAGGAGGTAGTGTTGGATTAATGGGATTAGTATCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGGTTAGCTTCTTCTTTTTTCCCTTTTTCCCTTTTTGAGAAGGTTCATGCTAATGACTAAACTCTTCTCTGTTTTTGGGTTTTATTTGCAGAGTTATCCCCAAGACCTTGATGCCAAGAGAGGTATGGTACTGTTATATCAAGTTTATCATTCACGTTTTTCTTAACTATTGAATTTTTTTTTGGAAGAAATGACCAAACAAATAAGTTGGAAATGGAGAGAGAGCCCCAACATTATCTGATATATTTTTGGTATTCTCAAATAGAAAGTGATTTTGTTTCCTCTTCTTCTGGCTACCATCTCTAAGATAATATGAACATCAATTTATTTGTCTACAAACCCATAAGAAAACTAGAGAAGCTGTTTTTTGCCCTTTTTTCTTTCTTACGTGAAAACCCACTTGAACTGTCTTGAAAAAGAAAGAGTGTGGAATGAAGAAATGGGTTATAATGATTTTTTACCCCTTTATCCATTTAGTTAGACAGATTTGTTCTCTCTCACACACACACACACCTCTGATTTTGGACTCTTTGTTCAATGGAACTAACACAGAAAATAGGGATTGAAATGAGAAATGAGGCAGTGAGATAATTTTGCAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGATATGCATCAAAGGAAGGCTGAGATGGCCAGGAGATCCGATGCCTTTATCGCTTTACCTGGTTCGTTTACTCACAAGTCTTATCTGCTATTCAAAGAAAAAAGAAGAACTCATTCTTCTTTCTTTTTATTATCTTCAATCACTGTGAATAATTTGTCTGTTTGCTGCTCCATGTCTCTTGTTCCTCCTCATTTTAGCCCTACAAAACCTTAATGTTAACCATAAACAAAAGTTTGTGGTAGGACAATTTTTGGGCCCCAAGCTTTAGAGGAGGCACTTAGCTTAGGCAAAATAGACTTAGACTTAGACTTAGCCCAACATTTAAATGTGTAGCTGCTCTAAACTGGGCCCTGCCCTTTTTGGTCTTGTTCTAAGTACCATCTTCTTCCCCTTTATACTTACCATTTAAATTGATGCATACCTCCCTACCTTCCCTTTTTAACACAAACTATTGATATTATTTGAATAATGTTAAAAACATCATAAATTGTGATGAAAATCAACAAATAAAGACAGACACAAAAGCATAAACGATATAAAAAAACGGTAATAAAAATTATGTAATTCGTTAACTGTCAACATGAGCTTAGCTCAACTGACATAGTGTTTGTACTATCAACTTTGAGATCAAAATTTCAATTTACACTTAATACTATATCTTTTTTAAAATAGATTAAGATCATATGGCCTTCTAAAGTTGGAGAGTTTATACATCGCGACTCTTATACTCGTTCGAAGTGGTAACTATAAGATTGAAGACATTCCAATATAGTTGAAGACAAATTTCAAATTATGACTACATGGACGTTGGATAAGAAAACAATATGTTTTGACATGAACGGTTCAAGTAAAAGAAACAGCACATCTAACATAAATATTGTTGTCAAACCTCTCAAGTAGTTGAGCTTCTCCAACGTAGTAAAATAAAAGGGTAGTTTTATTATATTGGGATTAAAGATAATGAGTATTGGAAGGTTGTTTTGTGAGATTTGATTATGAACAATCTCTGACACAGGAAATTGGGGTGCAGCCTTTTTTTTCCCTGAGAAATCTGAGGAAGGGCTGCCAAATTGGCAGTCTATTTGTATAGCTTATATAATTCAATGGTACAATTCTTAGCTCTAGACAAAGAAAAGAAGGTAGAAATTAAAGCAGATGGTCCTGAGTCCCCTATTTTTCTCAATTCTTCCCTACATTTATTACAAGCCTCTTCTTACTTTGGCATTATCTTCCATTGGGTCTAATATCTAAGCCCATTACCATCCAAGGCCTCAATATCTGAAGCCCAATTGAGTAAACAAATTCTAATTCATCTCCATGCTTTGTTATTCCTCGTGAAGGTGGCTATGGAACTTTAGAAGAACTGCTTGAAGTTATCACCTGGGCTCAACTGGGAATTCATGATAAACCGGTAAGCAAACATGTTCATGTTCATCGGAATTTTGGTTAAGAAAGGTTAATTATGAATCTTTTTTTTTTATTAAGATGAAGTGAGTTTGTTTATTTTTCAGGTTGGATTGTTGAATGTGGATGGATATTACAATTCCTTGCTGTCTTTCATTGATCAAGCTGTGGAAGAAGGTTTTATTAGTCCAAGTGCTCGTCATATTATTGTATCAGCACCTAATGCAAAGGAATTGGTGAAGAAAATGGAGGTAAAATCTCTAAAAAGAAAAAGATGAGCTTTTTGCATGTGCAATGAAGATTCAAATCTAAATTTAAAGTTTGAATATTGATTTAGGAGTATGTTCCAAGACATGAAAGAGTTGCTTCAAAGCATAGCTGGGAGATTGAACAATTAGGGTACCCTCCAAAATGTGACATCTCAAGATGAAATGAAATTTCAATACAACTTGACAAAGGGAAGCAAAGATGAAGACACACTACTCTTTTGGTAAAATGGAAGCCACTAATTTTATTTAGAACACCAACAAATTTGCTGAAGTTGGTCTTTTTTTCTTTTTTTCTTTTTTTAATTATGATGATTCTGCTATTGTAAACTACCAAAAAAAAAAAAAAGAAAAAAAAAAGAGAAGAAGAAGAAAAAGAAAAACTGACATAAAAAGAAGTATTGAAGAGTTTATGTAGTTTGGTATTGGAACTTGGCTTCCTAATTAGTTGTGTTTTAAGTTTTTTGTTTCTCAAAAGATAGGATGGTAAAATGGACCCTTAGTTAGCTTATATCAAATCAAT ATGGAGATGGAGAATCAACCCAAATCACCCATTTTCAAGAGGATTTGTGTTTTCTGTGGTAGCAGCCCTGGCAAGAAAACTAGTTATAAAGATGCTGCCATTGAACTTGGAAAAGAACTTGTTTCGAGAGATATTGATCTGGTTTACGGAGGAGGTAGTGTTGGATTAATGGGATTAGTATCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGAGTTATCCCCAAGACCTTGATGCCAAGAGAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGATATGCATCAAAGGAAGGCTGAGATGGCCAGGAGATCCGATGCCTTTATCGCTTTACCTGGTGGCTATGGAACTTTAGAAGAACTGCTTGAAGTTATCACCTGGGCTCAACTGGGAATTCATGATAAACCGGTTGGATTGTTGAATGTGGATGGATATTACAATTCCTTGCTGTCTTTCATTGATCAAGCTGTGGAAGAAGGTTTTATTAGTCCAAGTGCTCGTCATATTATTGTATCAGCACCTAATGCAAAGGAATTGGTGAAGAAAATGGAGGAGTATGTTCCAAGACATGAAAGAGTTGCTTCAAAGCATAGCTGGGAGATTGAACAATTAGGGTACCCTCCAAAATGTGACATCTCAAGATGA ATGGAGATGGAGAATCAACCCAAATCACCCATTTTCAAGAGGATTTGTGTTTTCTGTGGTAGCAGCCCTGGCAAGAAAACTAGTTATAAAGATGCTGCCATTGAACTTGGAAAAGAACTTGTTTCGAGAGATATTGATCTGGTTTACGGAGGAGGTAGTGTTGGATTAATGGGATTAGTATCTCAAGCTGTTCATAATGGTGGTCGTCATGTTGTTGGAGTTATCCCCAAGACCTTGATGCCAAGAGAGATAACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGATATGCATCAAAGGAAGGCTGAGATGGCCAGGAGATCCGATGCCTTTATCGCTTTACCTGGTGGCTATGGAACTTTAGAAGAACTGCTTGAAGTTATCACCTGGGCTCAACTGGGAATTCATGATAAACCGGTTGGATTGTTGAATGTGGATGGATATTACAATTCCTTGCTGTCTTTCATTGATCAAGCTGTGGAAGAAGGTTTTATTAGTCCAAGTGCTCGTCATATTATTGTATCAGCACCTAATGCAAAGGAATTGGTGAAGAAAATGGAGGAGTATGTTCCAAGACATGAAAGAGTTGCTTCAAAGCATAGCTGGGAGATTGAACAATTAGGGTACCCTCCAAAATGTGACATCTCAAGATGA MEMENQPKSPIFKRICVFCGSSPGKKTSYKDAAIELGKELVSRDIDLVYGGGSVGLMGLVSQAVHNGGRHVVGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDQAVEEGFISPSARHIIVSAPNAKELVKKMEEYVPRHERVASKHSWEIEQLGYPPKCDISR* Homology
BLAST of CsaV3_6G013990 vs. NCBI nr
Match: XP_004145748.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucumis sativus] >XP_008463955.1 PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucumis melo] >KGN46845.1 hypothetical protein Csa_021091 [Cucumis sativus]) HSP 1 Score: 442.6 bits (1137), Expect = 2.0e-120 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. NCBI nr
Match: TYK14286.1 (Lysine_decarbox domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 438.7 bits (1127), Expect = 2.9e-119 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. NCBI nr
Match: XP_038902690.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Benincasa hispida]) HSP 1 Score: 436.4 bits (1121), Expect = 1.4e-118 Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. NCBI nr
Match: KAG6605555.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 427.6 bits (1098), Expect = 6.7e-116 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. NCBI nr
Match: XP_022957761.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita moschata] >XP_023534492.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita pepo subsp. pepo] >KAG7035473.1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427.6 bits (1098), Expect = 6.7e-116 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.4e-103 Identity = 185/218 (84.86%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 1.9e-97 Identity = 172/207 (83.09%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 3.2e-97 Identity = 173/207 (83.57%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 8.0e-96 Identity = 170/205 (82.93%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.0e-94 Identity = 171/211 (81.04%), Postives = 191/211 (90.52%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy TrEMBL
Match: A0A0A0KAT1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G141420 PE=3 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.7e-121 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy TrEMBL
Match: A0A1S3CKD9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103501957 PE=3 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.7e-121 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy TrEMBL
Match: A0A5D3CV75 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00090 PE=3 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.4e-119 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy TrEMBL
Match: A0A6J1H054 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111459209 PE=3 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116 Identity = 211/218 (96.79%), Postives = 214/218 (98.17%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. ExPASy TrEMBL
Match: A0A6J1K6N5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111490689 PE=3 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 9.4e-116 Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 377.1 bits (967), Expect = 9.6e-105 Identity = 185/218 (84.86%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 355.9 bits (912), Expect = 2.3e-98 Identity = 173/207 (83.57%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.4e-95 Identity = 171/211 (81.04%), Postives = 191/211 (90.52%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 340.1 bits (871), Expect = 1.3e-93 Identity = 172/231 (74.46%), Postives = 193/231 (83.55%), Query Frame = 0
BLAST of CsaV3_6G013990 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 336.7 bits (862), Expect = 1.4e-92 Identity = 164/207 (79.23%), Postives = 187/207 (90.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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