CsaV3_6G013860 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G013860
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 10055071 .. 10055728 (+)
RNA-Seq ExpressionCsaV3_6G013860
SyntenyCsaV3_6G013860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTCGGCAACTCTTTCAGGCAACCGCGTACATCAAACACCCAATCAATAGATCCCTCTTACTTTCCCCAATTTCAGGTTTGCCTTTTTTTAAAAAAAAAAAAAAATTATCTCTTTCTAATATGCTTAATTAATTTCCCTGTTTCTTTCTTTCTTTTATTTTCGATCCATTTCCATGCAATATCCTTCACAAATATATGGTTTTAGGAACTTGTGGATCTTTTCTGATTGTTTTCTTTCTGGGTTTTGGATTTCTCGCTAATTTGTCTTTTTAAAATAAAATTTCCAGATCGTTCTATTTGGCGGTTGGAATGATATTCAGATCGTTCGTGGTGGTTATTGGTGATTTGATTACTATTGGGTTTCTGTGAATTGGGTTTATTGGTTTTCTTAATCTGTTTGCTGAGAACTGCGAGAACTTCTCTAATTTGGTATAAGTTCGAGCGCGGAATATCTTATAAATGGAATATTATGAGTATATATGCTTCACAGATTCACACTCTGTTTTAATAAATTAATGGGAGAAGGAAATAAATGTTTATTGATTGCTGCGTTCAAGGATCGGAATTTGTTCCCTGGGTATTGGGAAGATAATCAGAGGCCGCCGGGATATTGCATTTTGAGATTGGTGGTCTTTATTGGTACAGCTTGTTGA

mRNA sequence

ATGTTCGTCGGCAACTCTTTCAGGCAACCGCGTACATCAAACACCCAATCAATAGATCCCTCTTACTTTCCCCAATTTCAGATCGTTCTATTTGGCGGTTGGAATGATATTCAGATCGTTCGTGGTGGAAATAAATGTTTATTGATTGCTGCGTTCAAGGATCGGAATTTGTTCCCTGGGTATTGGGAAGATAATCAGAGGCCGCCGGGATATTGCATTTTGAGATTGGTGGTCTTTATTGGTACAGCTTGTTGA

Coding sequence (CDS)

ATGTTCGTCGGCAACTCTTTCAGGCAACCGCGTACATCAAACACCCAATCAATAGATCCCTCTTACTTTCCCCAATTTCAGATCGTTCTATTTGGCGGTTGGAATGATATTCAGATCGTTCGTGGTGGAAATAAATGTTTATTGATTGCTGCGTTCAAGGATCGGAATTTGTTCCCTGGGTATTGGGAAGATAATCAGAGGCCGCCGGGATATTGCATTTTGAGATTGGTGGTCTTTATTGGTACAGCTTGTTGA

Protein sequence

MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPGYWEDNQRPPGYCILRLVVFIGTAC*
Homology
[Close]
BLAST of CsaV3_6G013860 vs. NCBI nr
Match: KGN46832.1 (hypothetical protein Csa_020677 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 5.3e-45
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG 60
          MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG
Sbjct: 1  MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG 60

Query: 61 YWEDNQRPPGYCILRLVVFIGTAC 85
          YWEDNQRPPGYCILRLVVFIGTAC
Sbjct: 61 YWEDNQRPPGYCILRLVVFIGTAC 84

[Close]
BLAST of CsaV3_6G013860 vs. ExPASy TrEMBL
Match: A0A0A0KEJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140800 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG 60
          MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG
Sbjct: 1  MFVGNSFRQPRTSNTQSIDPSYFPQFQIVLFGGWNDIQIVRGGNKCLLIAAFKDRNLFPG 60

Query: 61 YWEDNQRPPGYCILRLVVFIGTAC 85
          YWEDNQRPPGYCILRLVVFIGTAC
Sbjct: 61 YWEDNQRPPGYCILRLVVFIGTAC 84

The following BLAST results are available for this feature:
BLAST of CsaV3_6G013860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46832.15.3e-45100.00hypothetical protein Csa_020677 [Cucumis sativus][more]
BLAST of CsaV3_6G013860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G013860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEJ12.6e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140800 PE=4 SV=1[more]
BLAST of CsaV3_6G013860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G013860.1CsaV3_6G013860.1mRNA