CsaV3_6G012720 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCATAACCTATAAACTATAATAAATTTGAACTATAACAATCAGTTCCAACACCCATAAAAGATATTTATAAAAAGAAAAAAAAAATGCATGTATTAAAAGAAAATAAAAGCTCAATGAAATAGTGACAGAGGAGGATAATGGAGATGAGTTCTGCACGTGTTTGAACAATTTAGCCACCAAGTAATGATTGTTTTCAATCAGAAACAAGACTGATAGAAAGAGTCTTAAGACAGAGCACTGTTGTTTTCAGACTCTATAGGGATACTAGACTTGAAGACTATCTTTAGACTTTTGGGGAAACATAAATTGACACTAAAAAATAGAAAAACAAACAAAAAAAAAGAAGAGTGGGGCTATTCTTTTCTTTCTATGTCATTAGTTTTCCCTATTGGATCATTTGCACATGTGACCCTCTTCAATACGAAATCATCCTCACCCTTCATCTGTTCTTGACACGTACCACACATATCGACACTACCAAATTCTGTTCCACCAAAACTTTAATAATATAATGCATATTGGGCAGAGAGTGGAAAATTCATCCCATCTACTTATTCCCCCATTAAGGTTTTCTTTAGCCTAAGCTTCTCCCTACACATTTTTATAGTTGTTTTTTCACGTCGGTCTCAACTCTAAAGGAATTTATGCCTCGTTGACATGTCAAGAAGTTGAGTTCATAGCTAATAGGTAAAGAAAACTTTTACTTTTGGTGTGTTCTGGTGATCTGTTGGTGAGAAGTATAAGTGGACTAGAGACTCTCATACGAGTATGGGAAAGATTCTCGTCTCTTTCTTTTCCTCTTATATTTCGTTATATCCTCGTTTGTTCAAGTACAATGTAACTGACAAAGTAATGGTAAAGAACAAACCAAGCAGGGGAAAATAGTTTTTTAATCCAATTTTCTATACATAGTTAACTACATACTAAACTCTTTTTTCCCTCTTTTCTTTTTAATATTTTTGAATTCTTATTACGGTGTGATTAGAGTGGGGTGCCAAGGTTCAAGTATTGCTATTCTTTTCCTCCTCATTTTCTCATTTTTTAGAACTCTCTTTTTTCTTTTTTTTTTTCAGATTTTACTGACTTTTTTCTACAAAATGGCGTTAATATAAAGCGGCTATTCCCTGTCATCCGAGTGCCCAATATCAGAGTGAAATAGAAGCCCTTCCTTATATGTATATGTTTTCATATCCACATGTATTTACTAATCATGTAGCTCCTCTAGGCACAATCCAGAGCAGTGAAATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGGAGCAGCACAGGAAAGAGGGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTACTGCTTTGAAAACCTCTCTTAATATCACCCATTCACGAAAGCCAATATGTCTTTTTCACTTTCCCCCTTCCTCCCTTTCTACGTGTATATACAATTATGCTGTTGTTTCTCTATGCAGGTTTCCAGAAGATTGGGGCTTGTTTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCATGGTGGCGGCAGAGTCATGGGGTAATTGATCGAAAAAGCTTGAATTTCTATTCTGAAAATGGTTTGATGTTTCAAAGTTTTAATTTTACATCTGTTTGTTTAATTTGTTTGGGTTTGGTTGATTTGCAGTATCATTCCCAGGACATTAATGAACAAAGAGGTTAGAAATATGCCAATATCCTAATTTGTTTTGGGTAATTGAAAATTCAATCAGCCAACACTTAACTTGTTATTCTACAAAATGATAATTTCTTGGGGGAAAAATTACAGATAACTGGAGAAACAGTGGGGGAGACAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTACCAGGTCCCAACCATTCCCTTTTCCCTTTCCTATTCAGAAACACAATCCCGCACTTCTTTTTTACATTTCTTTTCATAGTCCCCTTTTTAAAAAAGACCCCTGATAATGGGTTTCATTTTCCCTTCACTGCACTGATTTTCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTAAACTCTACAAAAATTACCTCATTAAACTCTGCCAGAAAGCTTTGTTTTGATCTCACGACCTTTAAGTTTGTTGTGCAATTTCTCTTCCTCAGGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGACGATGGTTTCATAAAACCATCACAACGCAAGATCATAGTGTCAGCACCCAACGCCAAGGACCTGGTTCAGAAACTAGAGGTCAGTCATTAAGTCAGACATTTCATCGAACACAACTTCTAAATTCTACGATTAAATTGTAAGCAGAGTATTTGACTAATGATGATCATGGATTGATTTATTTAGGAATACGTGCCTGTACACGAGGAAGTGATGGGCAAACCGAGATGGGAAATTGAGCAGCCACAGCCACAGCAACCGAAAAACCAAGTGGGGTTCGAACCCAAAACTTTCCACGCTCAGATCGCCCTGTAAAGTTGAAACATGAAAAGAAAGGGAAAAAAGATCGAGTGAAAGAAATGGAAAAGAGGAGTTTGGTGATTTTGGGTCGTTGTCGTGATCATAATCATCATGTTACCTAATTGTTGTATAATTGGATTGGATGTGAAAAATGTTCACAGAGATAAGATTGACCAAATCAATGAAATCGGTGGGACCTTCTACTCTTTTGATTGTAAGCCTTATGGAATAATATCATTAAGATTAAGACCAAAAATGGACCCC ATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGGAGCAGCACAGGAAAGAGGGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTTTCCAGAAGATTGGGGCTTGTTTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCATGGTGGCGGCAGAGTCATGGGTATCATTCCCAGGACATTAATGAACAAAGAGATAACTGGAGAAACAGTGGGGGAGACAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGACGATGGTTTCATAAAACCATCACAACGCAAGATCATAGTGTCAGCACCCAACGCCAAGGACCTGGTTCAGAAACTAGAGGAATACGTGCCTGTACACGAGGAAGTGATGGGCAAACCGAGATGGGAAATTGAGCAGCCACAGCCACAGCAACCGAAAAACCAAGTGGGGTTCGAACCCAAAACTTTCCACGCTCAGATCGCCCTGTAA ATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGGAGCAGCACAGGAAAGAGGGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTTTCCAGAAGATTGGGGCTTGTTTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCACAAGCTGTTCATCATGGTGGCGGCAGAGTCATGGGTATCATTCCCAGGACATTAATGAACAAAGAGATAACTGGAGAAACAGTGGGGGAGACAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTACCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGACGATGGTTTCATAAAACCATCACAACGCAAGATCATAGTGTCAGCACCCAACGCCAAGGACCTGGTTCAGAAACTAGAGGAATACGTGCCTGTACACGAGGAAGTGATGGGCAAACCGAGATGGGAAATTGAGCAGCCACAGCCACAGCAACCGAAAAACCAAGTGGGGTTCGAACCCAAAACTTTCCACGCTCAGATCGCCCTGTAA MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQAVHHGGGRVMGIIPRTLMNKEITGETVGETRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVDDGFIKPSQRKIIVSAPNAKDLVQKLEEYVPVHEEVMGKPRWEIEQPQPQQPKNQVGFEPKTFHAQIAL* Homology
BLAST of CsaV3_6G012720 vs. NCBI nr
Match: XP_011656935.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X1 [Cucumis sativus] >XP_031742423.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X1 [Cucumis sativus]) HSP 1 Score: 466.8 bits (1200), Expect = 1.0e-127 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. NCBI nr
Match: XP_011656936.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis sativus] >XP_031742424.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis sativus] >KGN46718.1 hypothetical protein Csa_020839 [Cucumis sativus]) HSP 1 Score: 466.8 bits (1200), Expect = 1.0e-127 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. NCBI nr
Match: XP_038902735.1 (LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Benincasa hispida]) HSP 1 Score: 437.2 bits (1123), Expect = 8.8e-119 Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. NCBI nr
Match: XP_022140611.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like isoform X3 [Momordica charantia]) HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114 Identity = 209/229 (91.27%), Postives = 217/229 (94.76%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. NCBI nr
Match: KAG6570989.1 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112 Identity = 205/228 (89.91%), Postives = 212/228 (92.98%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy Swiss-Prot
Match: Q8LBB7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.1e-94 Identity = 173/227 (76.21%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.1e-83 Identity = 148/199 (74.37%), Postives = 174/199 (87.44%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82 Identity = 146/200 (73.00%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 6.9e-82 Identity = 148/217 (68.20%), Postives = 182/217 (83.87%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.5e-81 Identity = 146/199 (73.37%), Postives = 171/199 (85.93%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy TrEMBL
Match: A0A0A0KB16 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G127300 PE=3 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.0e-128 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy TrEMBL
Match: A0A6J1CGK5 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111011217 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 6.4e-115 Identity = 209/229 (91.27%), Postives = 217/229 (94.76%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy TrEMBL
Match: A0A6J1G766 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111451489 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.9e-112 Identity = 206/231 (89.18%), Postives = 214/231 (92.64%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy TrEMBL
Match: A0A6J1I2B6 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111469858 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111 Identity = 204/233 (87.55%), Postives = 214/233 (91.85%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. ExPASy TrEMBL
Match: A0A6J1JC70 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111483713 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.3e-111 Identity = 202/228 (88.60%), Postives = 210/228 (92.11%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. TAIR 10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-95 Identity = 173/227 (76.21%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-84 Identity = 148/199 (74.37%), Postives = 174/199 (87.44%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 307.8 bits (787), Expect = 7.5e-84 Identity = 146/200 (73.00%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82 Identity = 146/199 (73.37%), Postives = 171/199 (85.93%), Query Frame = 0
BLAST of CsaV3_6G012720 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-82 Identity = 144/199 (72.36%), Postives = 171/199 (85.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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