CsaV3_6G007690 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G007690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ribosome biogenesis NEP1-like protein
Location	chr6: 6183428 .. 6184701 (-)
RNA-Seq Expression	CsaV3_6G007690
Synteny	CsaV3_6G007690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATTTCGTAATTGAACTTCTGAAATCCCACAAAAGAAAATGGGTTTATTCAGAACCTCTCTCGCAGTGAGCTCCTCAATCTCTTGTTTTTCACTTCAATAATGTGTGATTATAGTTCCATTTTCTTTTCTCGATATTTATTAATTCTTTAATTAATACATGTTACAGAATAAGATGTGGAAATCAATGCTTGTCGAAACTAGGATCCAAGGGAACCGTCGTTTTTCTTCATCCACTACAACCCCATCTGCCAATAATATTCAGAATGCTTCTTCTCCTTCTTCTTCTTCCAAGTTAATAAACAAAAAACCCATTTCGTTGTATATGTAATTAATTGATTAATTTTTTATGAGATAATATGATTAATGTGTGTACAGTGGCGGTTCCGGTGGGAGTGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGGATGGTGGCAGTGGTCGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGAGGACCCCGACACCGTCATCACTTCAGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGAGTGACACGAAGACGCTATCCGATCCAGTTCATCCCGACCCATTTACCCGGTGAACGTCTCTTTGATCCTAGTTTACTTATTTTTACAGTGTGTTGATGTAATATTAAACTTACATTATTAACGTATTACTATTCAAGATCAAGTTTATATTTCAACAAATTAAAATGGTTGAATGGAAATTAAGAATACTAATGTACTGCATGGGTGCACTTGTGTATTACAGGCCACGTAATGCTGAAACTCTGAAAACTGCTGGAATTGACCCTACCCGCCGTTGAACAACTATGAAAAATACTTACAATGCACTATCATTGTTCTTAATTATGTTAGTGATATGTGTATTGTTGTGTGTGTATATTTATTTAAAGCTCTTCTCTACTTCATTCTGCTTTTCTCTTCACTTTTTTTTGTATTGACTGTCAAGTTTCTTCAAAAGTAGAAGTACTAAGCTACTGCTAGGGGAATGTGGCTGTTATATAATTTGTTCTGTTAGTTTTCTTTTCCGGACAATAAAGCCAATTTAATTGGAATACCCTAAATCTTGGTTTTGGGATTATTCTTATCATCACCTCTTTTTCTCTTCCTTCCTCCTCAACTCAACTTTATGTACTACCTTGTGTCTCATTTTTATTGAAGCCCTTAAAT

mRNA sequence

ATGGGTTTATTCAGAACCTCTCTCGCAAATAAGATGTGGAAATCAATGCTTGTCGAAACTAGGATCCAAGGGAACCGTCGTTTTTCTTCATCCACTACAACCCCATCTGCCAATAATATTCAGAATGCTTCTTCTCCTTCTTCTTCTTCCAATGGCGGTTCCGGTGGGAGTGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGGATGGTGGCAGTGGTCGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGAGGACCCCGACACCGTCATCACTTCAGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGAGTGACACGAAGACGCTATCCGATCCAGTTCATCCCGACCCATTTACCCGGCCACGTAATGCTGAAACTCTGAAAACTGCTGGAATTGACCCTACCCGCCGTTGA

Coding sequence (CDS)

ATGGGTTTATTCAGAACCTCTCTCGCAAATAAGATGTGGAAATCAATGCTTGTCGAAACTAGGATCCAAGGGAACCGTCGTTTTTCTTCATCCACTACAACCCCATCTGCCAATAATATTCAGAATGCTTCTTCTCCTTCTTCTTCTTCCAATGGCGGTTCCGGTGGGAGTGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGGATGGTGGCAGTGGTCGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTGGAGGACCCCGACACCGTCATCACTTCAGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGAGTGACACGAAGACGCTATCCGATCCAGTTCATCCCGACCCATTTACCCGGCCACGTAATGCTGAAACTCTGAAAACTGCTGGAATTGACCCTACCCGCCGTTGA

Protein sequence

MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR*

Homology

[Close]

BLAST of CsaV3_6G007690 vs. NCBI nr
Match: XP_004140656.2 (uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical protein Csa_005593 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60
           MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM
Sbjct: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR
Sbjct: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of CsaV3_6G007690 vs. NCBI nr
Match: XP_008459927.1 (PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 153/168 (91.07%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60
           M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYM
Sbjct: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           FINKSFLRKVAHIQ DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 FINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of CsaV3_6G007690 vs. NCBI nr
Match: XP_038906484.1 (uncharacterized protein LOC120092464 [Benincasa hispida])

HSP 1 Score: 261.9 bits (668), Expect = 3.7e-66
Identity = 138/171 (80.70%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSN---GGSGGS 60
           M LF TSL NK+WK+MLV +RIQG RR +SSTT P+ANNIQ ASS SSSS+   GGS  S
Sbjct: 1   MALFTTSLTNKVWKAMLVGSRIQGKRRLASSTTAPAANNIQKASSSSSSSSSSKGGSSSS 60

Query: 61  EYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS 120
           EYMKGEYAPIYIV+GMVAV VSI THTAKQQLLHSP+VN SKKKRESIPEV+DPDT+I S
Sbjct: 61  EYMKGEYAPIYIVVGMVAVAVSIGTHTAKQQLLHSPVVNFSKKKRESIPEVDDPDTIINS 120

Query: 121 ADKFINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           A+KFINKSFLRKVAHIQ DTKTL DPVHP+PFTRPRNAETLKTAG+DPTRR
Sbjct: 121 ANKFINKSFLRKVAHIQEDTKTLPDPVHPNPFTRPRNAETLKTAGVDPTRR 171

[Close]

BLAST of CsaV3_6G007690 vs. NCBI nr
Match: KAA0039866.1 (putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24635.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.8 bits (665), Expect = 8.3e-66
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 16  MLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVA 75
           MLV TRIQGNRRF+SSTT PSAN   ++SS SSSS GGSG SEYMKGEYAPIYIVMGMVA
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVA 60

Query: 76  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQS 135
           VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ 
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 136 DTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           DTKTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 DTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of CsaV3_6G007690 vs. NCBI nr
Match: ADN33694.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 258.8 bits (660), Expect = 3.2e-65
Identity = 139/153 (90.85%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 16  MLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVA 75
           MLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYMKGEYAPIYIVMGMVA
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVA 60

Query: 76  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQS 135
           VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ 
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 136 DTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 DTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.7e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60
           MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM
Sbjct: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR
Sbjct: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 168

[Close]

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.9e-74
Identity = 153/168 (91.07%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MGLFRTSLANKMWKSMLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYM 60
           M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYM
Sbjct: 1   MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYM 60

Query: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120
           KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK
Sbjct: 61  KGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADK 120

Query: 121 FINKSFLRKVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           FINKSFLRKVAHIQ DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 FINKSFLRKVAHIQDDTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 165

[Close]

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL
Match: A0A5D3DLZ1 (Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001820 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.0e-66
Identity = 139/153 (90.85%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 16  MLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVA 75
           MLV TRIQGNRRF+SSTT PSAN   ++SS SSSS GGSG SEYMKGEYAPIYIVMGMVA
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVA 60

Query: 76  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQS 135
           VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ 
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 136 DTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           DTKTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 DTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR 151

[Close]

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL
Match: E5GB52 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 139/153 (90.85%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 16  MLVETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVA 75
           MLV TRIQGNRRF+SSTT PSAN    +SS SSSS GGSGGSEYMKGEYAPIYIVMGMVA
Sbjct: 1   MLVGTRIQGNRRFASSTTAPSAN---ASSSSSSSSKGGSGGSEYMKGEYAPIYIVMGMVA 60

Query: 76  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQS 135
           VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ 
Sbjct: 61  VVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQD 120

Query: 136 DTKTLSDPVHPDPFTRPRNAETLKTAGIDPTRR 169
           DTKTL DPVH DPFTRPRNAETLKTAG+DPTRR
Sbjct: 121 DTKTLPDPVHLDPFTRPRNAETLKTAGVDPTRR 150

[Close]

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL
Match: A0A6J1D5I0 (uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.2e-51
Identity = 117/158 (74.05%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 11  KMWKSMLV--ETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIY 70
           K+WKSMLV   +RI+G R F+SSTT         ASS SSS       SEYMKGEYAPIY
Sbjct: 7   KLWKSMLVGIPSRIEGKRCFASSTT---------ASSSSSSK------SEYMKGEYAPIY 66

Query: 71  IVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLR 130
           IVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+DPDTVITSADKF+NKSFLR
Sbjct: 67  IVMGMVVVAVTIGTHTAKQQLLHSPVVMLSKKKRESIPEVDDPDTVITSADKFVNKSFLR 126

Query: 131 KVAHIQSDTKTLSDPVHPDPFTRPRNAETLKTAGIDPT 167
           KVAHIQ   KTL DP HPDPFTRPRNAETLKTAG+DPT
Sbjct: 127 KVAHIQDHNKTLRDPQHPDPFTRPRNAETLKTAGVDPT 149

[Close]

BLAST of CsaV3_6G007690 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 18  VETRIQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVAVV 77
           V  +  G+RRF ++T    A    N  S              + GE+AP+ I+ G V + 
Sbjct: 12  VGNQFGGSRRF-ATTVADGAKQTYNKFS--------------IMGEFAPVAIIGGFVGLA 71

Query: 78  VSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQSDT 137
           V +A H+ KQQL+H+P ++  K +R ++ EV+DP+  ++SADKFINKS+LRKV  IQ  +
Sbjct: 72  VLMAGHSLKQQLMHAPAISTRKNRRAAVAEVDDPENCVSSADKFINKSWLRKVGQIQDKS 131

Query: 138 KT-LSDPVHPDPFTRPRNAETLKTAGIDP 166
           K  LSDP  P+PFT PRNAETL + G+ P
Sbjct: 132 KAILSDPTRPNPFTTPRNAETLNSVGVAP 145

[Close]

BLAST of CsaV3_6G007690 vs. TAIR 10
Match: AT5G07330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.6e-20
Identity = 51/146 (34.93%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 22  IQGNRRFSSSTTTPSANNIQNASSPSSSSNGGSGGSEYMKGEYAPIYIVMGMVAVVVSIA 81
           +Q  R ++ +TT P +     A++        +  +   KG++ P+Y+ +G++++ V+  
Sbjct: 13  VQRLRTYTKATTVPRSKAYSTAATEYGGQRTATTAAA-TKGDFTPVYVSIGLISLSVTFG 72

Query: 82  THTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQSDTK--T 141
            +TA   L  +P V  +KK RE++PE+EDPD V+  AD+F N+S+ RK+AH+Q   K   
Sbjct: 73  VYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADRFANRSWFRKIAHVQEFDKQDV 132

Query: 142 LSDPVHPDPFTRPRNAETLKTAGIDP 166
           +SDP+  D F     A TLK  G+DP
Sbjct: 133 ISDPIRKDQFAHKPRALTLKDVGVDP 157

The following BLAST results are available for this feature:

BLAST of CsaV3_6G007690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140656.2	1.8e-84	100.00	uncharacterized protein LOC101206372 [Cucumis sativus] >KGN46404.1 hypothetical ...	[more]
XP_008459927.1	1.4e-73	91.07	PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]	[more]
XP_038906484.1	3.7e-66	80.70	uncharacterized protein LOC120092464 [Benincasa hispida]	[more]
KAA0039866.1	8.3e-66	90.85	putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa] >TYK24...	[more]
ADN33694.1	3.2e-65	90.85	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of CsaV3_6G007690 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G007690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC39	8.7e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1	[more]
A0A1S3CBE5	6.9e-74	91.07	uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=...	[more]
A0A5D3DLZ1	4.0e-66	90.85	Putative Ribosome biogenesis protein NEP1-like OS=Cucumis melo var. makuwa OX=11...	[more]
E5GB52	1.5e-65	90.85	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1D5I0	8.2e-51	74.05	uncharacterized protein LOC111017496 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsaV3_6G007690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63060.1	2.6e-25	42.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G07330.1	5.6e-20	34.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..168
None	No IPR available	PANTHER	PTHR33919	OS09G0127700 PROTEIN	coord: 7..166
None	No IPR available	PANTHER	PTHR33919:SF9	RIBOSOME BIOGENESIS NEP1-LIKE PROTEIN	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G007690.1	CsaV3_6G007690.1	mRNA