CsaV3_6G003130 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G003130
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	U2 snRNP auxiliary factor large subunit
Location	chr6: 2303174 .. 2310574 (+)
RNA-Seq Expression	CsaV3_6G003130
Synteny	CsaV3_6G003130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATCTCTATCTACGAGGGTTACTACTTAGATACTGATATATAAACAGCGGGAACTCTCTTCCGAACCCTAGGATTCTCGTTGGCTTTCTACTCCCCAATTTCATCACCAAAATTTTCTCCCACCAAAAGATTCACAAACCACAGCTAAATTCTGTGGATCGTACTCCCAATTCAATCATGACGGATTACGACAGCAGGTACGAAGGTAATGGGGAAGATGCGGACAACTACGGCGATGGTTTTTCTCCTCAAGCCCGTGCTGCCAGCCACGGTGGCCACGATACTCACACTGATTCCAAATCTCAGGTATTTTACGCTTTAATCATGCATCTCAATTCTTTTCTTATATTACCTCTTTTCTTTGATTTGGAGAATTCATCGTTCTGCTGCTTCTAAGCCGAAAATATTCGTTTTTTGAGTTCTAATTGGAGTTTACTTACCGTATTCTTTAGATTTAGTCATTACTGGGACCGTTGAGGTTTGATGTTCTGTCCTAGTTTGAGTGGAGTATTCTGAATGAATGAAACATCACCTCCAACCTTTCGGTTTTATTTTGAATACTAATTCTTTATCTTATTTCGAACGATACATTTTTTTTTGTTTGGATGTTTGCTATAAAGTACTAGAGAATGACAATTTAGTAATACGGCGTTCCAATCATGATTTGTAAATTGAAAATTCGAATACAGTAAGGTTAGACCAGCAATTTATACTTAAATATATGAAATCCAAAGAAATCTACCTATTCTTGTCTCGAAAACTTTTTAATTGAAAACATGATTTTATTTTTGGATCTTAAACCCTACTCTTTTTTGGGATTAGAAACGCTGGAACTCGTTTGAAATCCATTAGTATTTTAAGTTACTCAAGATCTTCAAGATAAAAATAGACCACAAGTTAATTCTTGGTGGTTCTTTTTGTTCGTTTGGAGACAATGTTTAGTTGAGATTAGGCAATTGGGTGATCTTTGGGAATTGGTTTTGTTTCTGCTTTTCTTTTCTTCCTTAGCTTGGGCCCATCATTTATATTTAATGTAATGAAGAAGCAGTTTCCTATACATTAAAGGATTACGAAGAAACCAAAACCTTACTAACAAACTATTCTTTTACAGCATGGTTCTAGGGATTATGAAAGAGAGTCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGTGATAGGGAGAGGGAGAGGGATCGAGACCGAGGTCGAGATAGGGATAGAGAGAAAAGCAAGGATGGGGAAAGAGATCGGGAGAAGGATAGAGATAGAGATAGGGATCGCGACAAAGACCGTGATAGGGATCGTGACCGCCATCATAGAGACCGCCACAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAGGTAGAGATGATGATGATTACTACAGGGGTAGAGACTATGACAGGTAATGGATTGTGTATGAACTTTCCTAGCTTGTTGTTCATAATGCATTCTTGCTTCTGACCTTTTGCACTTCAGGGATACATGGTCATTTAACTGCTATCATTTTTTTTTGTAGTGTAAATATGTATTATTTGACCTTTTTTTGGGTTAAAGTTTGTCAATGGTGGTATAGCTAGTAAATTGGTTTATTATTTCACTTATAGACGGAGAGATTATGATAAAGAACGAGAAGACAGGCACAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACATGAGCATAGGTCAAGGTCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGGTTGGATATGGAAGTTAAAAGCTATACTTTTCTTGTAAAATGTTTTATTTTACGTCCATTTGACGTCATGTGTTGAAACTTAGTAGGTCTTGACTCTTAATAGTCTGACTTTTTACTGTAATTGCTTTACAGGGGGCTTTCCCTTATATTGGGTTTATTTTGACAGCTGTCAATTGTGAAATAATTTTGCATAGTTGGAGTCCCTTTGTATAGAGGGAGTTCCCTTTTTTTGTGGACTTGTTTTTTGTATGGTTGTGTATTCTTTTATTTTTTTCTCAATGAATTTGTTTTCATATAAAAAAGTTATCAGTAAGATAATATGTTATGGATTGATATGTTGTATTTTTGTTGAGATATTGGACTGTCTCCAGTTATAGTTTGAAATGCGGAAGTGTGAGTTGTTATGAGCTTATGGTTCCTGGCATTTCTCCAACCATATTCGTTTTGTTTTGTTTTTCTTTTTTTATTCAATTTCCCTAGGGAGCCGTTACTGATATTACTTACCCCACATTATCCATATCTTGAGATGGAGAATACTATTTTTGTACCTCAGTCGTCTAAACGGGAAGTGGTGGAGAGTTGATTTGGGAGAACTATATTTTTGGTTCTCTTCGAGTAACTTCCATTACAAGTTTTGGACTTTTGGTCTTCCTTTGATTTGTGCCAATTAAAGCTGAAGGAGTAGTCTTTGCCATATATATTTCTTTCTCTTTCAATGATCTGTTTTTCCTAATAATTTTTGTGAAGTCTAAACAGAATAATTTTTAAGTAGTAGTTGGTATGTGGAATGTTTGGTAATATATTTCTGCCATTTCATTCTACAAAAAGTCGTTAAGAGTTCTATTTTTCTCTGGACGATAAATAGATGTTAATCTATTCTTCTAAGTTTAATTTGTCACGGAAATATAAGTGATGTTCACATTTTGAATTTGAGTAGGGTTTCTGAATATCTTTAAGTGCTAAGAGTTCTATTATTCCATGGACTGTTAATAATTGTTAAGCTATTTACCAAGTTCTAATTTGTCATCGATGTATAATGGATGAATTTGAGTAGTGTATCTAGGCATTTCTTAAAGGTTAGAGTTCTATTTTCCTCTTGACCATAAATAATTGTTAATCTATTCTTCTAAGATCTAATTTATCATGGATATATAATGGTTGCTCATATTCTAAATTTGAGTTGTGTATCTGGACATCTATTTTCTTTTTTTTTTTCTGAAAGGAATTTATATGGGCTGAAATCGTACATCCACAATACAGGAATGCTAGGGACGAGCTATCTTTATTCGGTTTCTCATCTGTTTCATATATTTCGTAGATTCCTTTTCTATTTGTAGTTTAGGAAGAATTCTTCTGCATCATACAAGTTGCGTCTCTCCTGGTCATGAGATTTCATGGTTTAACACCTTTGCTTTTGTCTTTGAACTTGTTGTGCTAACATCTATTTATCTGCAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCAACAACTGCAATATTGTCTGGTGCAACTGCTGCTGCAGGTACCTAAATCCTTATGCGCAGGAATATCCTTTTGAATTATTTAACTGCTTTTCTTTGTTGAATATAGTGTGGAAAGTTGACAACAAATTGCATGGTGTTATTGGGTAAGCTATATTTTGTTCCTTAATCTGCATATGTAGTCATTTAAAAATGTGGTCTTTGGACGGGCTATGCTATTATTTATTATTTACTTGGTACACTCATTCTGGAACTGAGAGGTATTTTGGTTTTTTGTTGCTTGTCTTTGGTGTTTGTTTGTTGTTTTGTTTGTATGTCTCGTCCAATTTTGTGAGAAGGCAATGTTGGACTACTTGCCCCTCTGTGCTGACAATGGGCGTGAGCTGACTTCTGTAGCTTTTATGTGCAAGAAGGACCAATGCACCGGTCAGATGGATCTTGTTCGTCTTCATCTGGAAACTTATTCCTTTTTGGGTAGTCTTACAAATATTTCTCAGAATTTGTACATGTATAAAATTTGTATGCTTAAATAATTTATTGGAAGAGGTTAAGTTACACTTACACCATACCTTTTTTGTGAAGCATGTAAGTAGTTTCAGGTGATACTTGAATCTTCGCGTGTGGCAATGTTGTTGGCTTGAATTTTGATTATTTTCTTAGATTTAGCCTAATTTTTTTAGCAGGCCAGATTCCTGGGACAACTCCAGCTATTCCCGGAATGTTTCCTACCATGTTTCCACTGGCGACCGGTCAGGTAATTCTGCTTCTCCCATATTAAAAAGCATGGAAAAAAACAATCTTTAGGCAAATGTCATTATTAGTTATTTGATAGAATGTTTTTTTATTGAAATAAACAGCTTTCATTGAGACAATGTACTATAAACCCTATTTGATAGAATGTATATACTCGTATTTTACATTGTTGCTTTTTAATTGTTTTCATGCAGCCCTTTGGGGCACTTCCTGTTATGCCTGTTCAGGCAATGACACAGCAGGTAATATTCAGTACCATTGTAATCTCTTTTTTTGTTGTATGCATTTTAAGGGTGTAAAAGTTTTAAACTTTTTCTGTATGTTCTGATGTTAGGCTACCAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGGTTTTTGCACCTATTGTGACTCTTGTTTAATATTTTATAGTCCAAAATCTTCCCATATTTTCTTGTCCAAAGATCACCATTTGTGCATCCAATTGCAGTTCTTTAGCTAATTTGGTCTGTGTAGGTTTTGGTTTCTAGTAATATTTTGATTCTGTATTGCCAAATGCAATATATCGATTCGAAGAACTTATCATTCTTGGCTATGTTTATCTCTCTCAATTTCTCATGCCCAGTTGTTGATAACCTTGCTTTTTCCTTTTCCTTTCCATGTCTTGTAGCTATTTAGCCAAGGCATACTCGAGCCAACAGGATGCCATATTTGTTATTTACAAAGTTCATTTGTTGTTTGCAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGTCCTGGTATGGTGTTTTTTAAGACTTTTTTAATTAATATACGTTGGTGTTCAGTATTGCTGTATTAAGTTGATCACCTCATGCGATGGCCATCTATCATTTATAGGAGATGCGGTTGTCAATGTATACATTAATCATGAGAAAAAGTTTGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGTACTTCGTTTTCATATGCATATTTTATGTTCAAACTAAATTTACTGTGCAAAATAGTTTTCTTATTTGTTAATATTGTTCAAATTAGGGAGCACCTGTAAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCTAGCCAGCCAAACCCAAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCGAATCAAGGAGCCAATCAACCCAAACCAGAACAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGGTGGGTGAATTCTAAATGAATGCATGCAATTGCCTCCTTTCTACCTAAGAATTTTTAAATACCAGTTCATCATTGAAATTATCAATTGAATAATTTCGGGGAAAAAGGCCAATTGCATACCTCTTCATTAAAGTTGTGATTCAACCAGCATATAGTTTTGTTTTTTGGAGCGCTTTGAAGGACTGAAAATTCTTAGAATATTATTGTAAAATGCAGAGAATTTCCTAAGAAGTGACAAATAACTTGTAGTGGTTGTAAGGATATGGTTTGTTTCCTTCTTGCATGCCTATTATATCAAAACCGATAAGAGTCCATGGTTAAATTTTTATTCTCCATCTATGTCTCAGTATGTCATATTTGTTCTTTTTTAAATAATTGTGCAGTATTATTATCTTTTGGTTTATAGCTTTCTTACCGTATTCCTCTCTCAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTCTGTCTTACACAAGTTGTGACCCCTGAAGAGCTTATTAATGATGAAGACTATGAAGATATCATGGAAGACATGCGAGGGGAAGGCGGAAAATTTGGTAAACAAACAAATCTTTTGATTGTGGTCCTATAATCTAATAATAGATTCTATATTTTGTTTTTAAATTTTAAAGCTTCATGCTACTCATTGGTTTCTTGTTTGTGTTTTTTTTGTGTGTGATATCTCTGTTTTACAGCCTTTTCTTGTCCTCACATTCTGGTAGAAAGAATCAGACAAATAACTTACAGACAGAAGCCTCCATAACCTTCTTTCTTTATACACCCGCCCAATTTGTACTTTACTTGATTCTGCAAATTTGTGGTTTCAAGTGGTTTTTATTGTCTTTTTGCAGGTACATTAGTGAATGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGCATGATCTTTGAACCACGTTTTTTTCATTTTTTTTTTTTCTATGTTAATTTGGAACTGTAATCTCATTGTCCAGGGTTTTGTTGTGTTATATCAGGTCTTTTTGGAGTATGCAGACATTGATAGTGCAACGAAAGCTCGAGCTGGTTTGAATGGAAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAA

mRNA sequence

ATGACGGATTACGACAGCAGGTACGAAGGTAATGGGGAAGATGCGGACAACTACGGCGATGGTTTTTCTCCTCAAGCCCGTGCTGCCAGCCACGGTGGCCACGATACTCACACTGATTCCAAATCTCAGCATGGTTCTAGGGATTATGAAAGAGAGTCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGTGATAGGGAGAGGGAGAGGGATCGAGACCGAGGTCGAGATAGGGATAGAGAGAAAAGCAAGGATGGGGAAAGAGATCGGGAGAAGGATAGAGATAGAGATAGGGATCGCGACAAAGACCGTGATAGGGATCGTGACCGCCATCATAGAGACCGCCACAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAGGTAGAGATGATGATGATTACTACAGGGGTAGAGACTATGACAGACGGAGAGATTATGATAAAGAACGAGAAGACAGGCACAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACATGAGCATAGGTCAAGGTCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCAACAACTGCAATATTGTCTGGTGCAACTGCTGCTGCAGGCCAGATTCCTGGGACAACTCCAGCTATTCCCGGAATGTTTCCTACCATGTTTCCACTGGCGACCGGTCAGCCCTTTGGGGCACTTCCTGTTATGCCTGTTCAGGCAATGACACAGCAGGCTACCAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGTCCTGGAGATGCGGTTGTCAATGTATACATTAATCATGAGAAAAAGTTTGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGGAGCACCTGTAAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCTAGCCAGCCAAACCCAAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCGAATCAAGGAGCCAATCAACCCAAACCAGAACAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTCTGTCTTACACAAGTTGTGACCCCTGAAGAGCTTATTAATGATGAAGACTATGAAGATATCATGGAAGACATGCGAGGGGAAGGCGGAAAATTTGGTACATTAGTGAATGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGTCTTTTTGGAGTATGCAGACATTGATAGTGCAACGAAAGCTCGAGCTGGTTTGAATGGAAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAA

Coding sequence (CDS)

ATGACGGATTACGACAGCAGGTACGAAGGTAATGGGGAAGATGCGGACAACTACGGCGATGGTTTTTCTCCTCAAGCCCGTGCTGCCAGCCACGGTGGCCACGATACTCACACTGATTCCAAATCTCAGCATGGTTCTAGGGATTATGAAAGAGAGTCTTCAAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGTGATAGGGAGAGGGAGAGGGATCGAGACCGAGGTCGAGATAGGGATAGAGAGAAAAGCAAGGATGGGGAAAGAGATCGGGAGAAGGATAGAGATAGAGATAGGGATCGCGACAAAGACCGTGATAGGGATCGTGACCGCCATCATAGAGACCGCCACAGGGATCGAGGTGAGAGGAGGGAAGGGGGCAGAGGTAGAGATGATGATGATTACTACAGGGGTAGAGACTATGACAGACGGAGAGATTATGATAAAGAACGAGAAGACAGGCACAGACGTAGGTCTCGTTCTCGCTCAAAGGGAATACATGAGCATAGGTCAAGGTCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCAACAACTGCAATATTGTCTGGTGCAACTGCTGCTGCAGGCCAGATTCCTGGGACAACTCCAGCTATTCCCGGAATGTTTCCTACCATGTTTCCACTGGCGACCGGTCAGCCCTTTGGGGCACTTCCTGTTATGCCTGTTCAGGCAATGACACAGCAGGCTACCAGACATGCACGACGTGTTTATGTGGGCGGGCTACCACCAACAGCCAACGAACAGTCTGTTGCCACATTTTTCAGTCAGGTTATGGCAGCAATAGGAGGAAATACCGCTGGTCCTGGAGATGCGGTTGTCAATGTATACATTAATCATGAGAAAAAGTTTGCTTTTGTGGAGATGAGATCTGTTGAGGAAGCCAGTAATGCAATGGCATTGGATGGGATCATCTTTGAGGGAGCACCTGTAAAGGTGCGAAGACCTAGTGATTACAATCCTTCTCTTGCTGCAACGCTTGGTCCTAGCCAGCCAAACCCAAATCTGAACCTAGCTGCTGTTGGTCTAACTCCAGGTTCAGCTGGTGGTCTTGAGGGTCCAGACCGCATTTTTGTGGGTGGACTTCCCTATTACTTCACAGAAGCTCAGGTGAGGGAGTTGCTGGAGTCTTTTGGGCCCCTACGAGGTTTTGATCTCGTGAAAGACAGAGAGACTGGAAATTCAAAAGGATATGCATTTTGTGTTTACCAAGATCTTTCAGTCACAGACATAGCCTGTGCAGCACTCAATGGTATTAAAATGGGTGATAAGACGCTCACTGTTCGGCGTGCGAATCAAGGAGCCAATCAACCCAAACCAGAACAAGAAAGTGTTCTTTTACATGCACAGCAGCAAATTGCTTTACAGAAGCTTATGCTACAGCCTGGGGCTGTATCCACCAAGGTTCTCTGTCTTACACAAGTTGTGACCCCTGAAGAGCTTATTAATGATGAAGACTATGAAGATATCATGGAAGACATGCGAGGGGAAGGCGGAAAATTTGGTACATTAGTGAATGTCGTTATCCCGCGTCCAAGACCCAATGAAGCAGCACCTGGAGTTGGAAAGGTCTTTTTGGAGTATGCAGACATTGATAGTGCAACGAAAGCTCGAGCTGGTTTGAATGGAAGAAAATTTGGAGGGAACCAAGTGATGGCTGTATTCTATCCTGAGAACAAGTTTGCCCAAGGGGAGTATGATGCCTAA

Protein sequence

MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA*

Homology

[Close]

BLAST of CsaV3_6G003130 vs. NCBI nr
Match: XP_004138355.1 (splicing factor U2af large subunit A isoform X7 [Cucumis sativus] >KAE8646604.1 hypothetical protein Csa_005134 [Cucumis sativus])

HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 587/587 (100.00%), Postives = 587/587 (100.00%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR
Sbjct: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240
           SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240

Query: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300
           PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE
Sbjct: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300

Query: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360
           KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV
Sbjct: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360

Query: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420
           GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC
Sbjct: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420

Query: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480
           VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480

Query: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540
           PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV
Sbjct: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540

Query: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. NCBI nr
Match: XP_011656493.1 (splicing factor U2af large subunit A isoform X6 [Cucumis sativus])

HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 587/588 (99.83%), Postives = 587/588 (99.83%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR
Sbjct: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGAT-AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240
           SRSKSKRISGFDMAPPTTAILSGAT AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240

Query: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300
           MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH
Sbjct: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300

Query: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360
           EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360

Query: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420
           VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420

Query: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480
           CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML
Sbjct: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480

Query: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540
           QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG
Sbjct: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540

Query: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588

[Close]

BLAST of CsaV3_6G003130 vs. NCBI nr
Match: XP_008445608.1 (PREDICTED: splicing factor U2af large subunit A-like isoform X3 [Cucumis melo])

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 580/587 (98.81%), Postives = 581/587 (98.98%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RD DRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240
           SRSKSKRISGFDMAPPTTAILSGATAAAGQIPG TPAIPGMFPTMFPLATGQPFGALPVM
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGATPAIPGMFPTMFPLATGQPFGALPVM 240

Query: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300
           PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE
Sbjct: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300

Query: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360
           KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV
Sbjct: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360

Query: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420
           GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC
Sbjct: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420

Query: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480
           VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480

Query: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540
           PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV
Sbjct: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540

Query: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. NCBI nr
Match: XP_008445607.1 (PREDICTED: splicing factor U2af large subunit A-like isoform X1 [Cucumis melo])

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 580/588 (98.64%), Postives = 581/588 (98.81%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RD DRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGAT-AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240
           SRSKSKRISGFDMAPPTTAILSGAT AAAGQIPG TPAIPGMFPTMFPLATGQPFGALPV
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGATPAIPGMFPTMFPLATGQPFGALPV 240

Query: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300
           MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH
Sbjct: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300

Query: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360
           EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360

Query: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420
           VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420

Query: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480
           CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML
Sbjct: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480

Query: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540
           QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG
Sbjct: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540

Query: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588

[Close]

BLAST of CsaV3_6G003130 vs. NCBI nr
Match: XP_038884483.1 (splicing factor U2af large subunit B isoform X9 [Benincasa hispida])

HSP 1 Score: 1082.0 bits (2797), Expect = 0.0e+00
Identity = 575/587 (97.96%), Postives = 581/587 (98.98%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNY DGFSPQAR ASHGGHDTH+DSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYVDGFSPQARGASHGGHDTHSDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+R+RDRDRGR+RDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRDRDRDRGRERDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSP+RSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPSRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240
           SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240

Query: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300
           PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE
Sbjct: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300

Query: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360
           KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV
Sbjct: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360

Query: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420
           GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC
Sbjct: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420

Query: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480
           VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480

Query: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540
           PG VSTKVLCLTQVV+PEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV
Sbjct: 481 PGTVSTKVLCLTQVVSPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540

Query: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot
Match: Q9ZR40 (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia OX=4092 GN=U2AF65B PE=2 SV=1)

HSP 1 Score: 817.0 bits (2109), Expect = 1.4e-235
Identity = 457/588 (77.72%), Postives = 509/588 (86.56%), Query Frame = 0


Query: 8   YEGNGEDADNYGDGFSPQARAASHGGH----DTHTDSKSQHGSRDYE--RESSKSREKER 67
           YEGNGED DNY  G SP  ++ S  GH    D ++DSKSQH SR+ E  R+SS+SREK+R
Sbjct: 4   YEGNGEDIDNYTGGSSPPPKSRSSHGHGPTPDDYSDSKSQHSSRENEKDRDSSRSREKDR 63

Query: 68  DKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRG 127
           ++GRD++R+RDRDR R RDR            DR RDRD+D++R++DRDRHH DRHRDR 
Sbjct: 64  ERGRDKDRDRDRDRDRGRDR------------DRGRDRDKDREREKDRDRHHGDRHRDRS 123

Query: 128 ERR--EGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRS 187
           +RR  E  R RDDDD +R RDYD++R++ K+RE RHR RSRSR  G  EHRSRS    RS
Sbjct: 124 DRREKERTRDRDDDDRHRTRDYDQQREHAKDRESRHRHRSRSR--GRSEHRSRS----RS 183

Query: 188 RSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 247
           RSRSKSKRISGFDMAPPT+A+L G TAAAGQ+PGT P IPGMFP MFPLA+GQ FGALPV
Sbjct: 184 RSRSKSKRISGFDMAPPTSAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQ-FGALPV 243

Query: 248 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 307
           MP+QAMTQQATRHARRVYVGGLP  ANEQSVATFFS VM+AIGGNTAGPGDAVVNVYIN+
Sbjct: 244 MPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINY 303

Query: 308 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 367
           EKKFAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 304 EKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAA 363

Query: 368 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 427
           VGL+PGSAGGLEGPDRIFVGGLPYYFTEAQ+RELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 364 VGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAF 423

Query: 428 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 487
           CVYQD+SVTDIACAALNGIKMGDKTLTVRRANQG  QPKPEQESVLLHAQQQIALQ+LML
Sbjct: 424 CVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLML 483

Query: 488 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPN-EAAP 547
           QP  ++TKVL LT+V++ +EL +DEDY+DI+EDMR E GKFG+LVNVVIPRP PN E  P
Sbjct: 484 QPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTP 543

Query: 548 GVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYD 587
           GVGKVFLEYAD+DS++KAR  LNGRKFGGNQV+AVFYPENKF +G+YD
Sbjct: 544 GVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDYD 572

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot
Match: Q9ZR39 (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia OX=4092 GN=U2AF65A PE=2 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 1.2e-228
Identity = 449/585 (76.75%), Postives = 498/585 (85.13%), Query Frame = 0


Query: 8   YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDY--ERESSKSREKERDKGR 67
           YEGNG D DN  +G SP                 SQH SRD+  ER+SS+SR+KERDKGR
Sbjct: 4   YEGNGVDIDN--NGASPY----------------SQHISRDHENERDSSRSRDKERDKGR 63

Query: 68  DRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRGER-- 127
           D++R+RDR+R RDRD        RDR K+RD+DR RD+D ++DRDRHHRDRHRDR +R  
Sbjct: 64  DKDRDRDRNRDRDRD--------RDRVKERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRE 123

Query: 128 REGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSRSRS 187
           RE  R RD+DD +R RDYDRRRD DK+RED  RRR R  S+G  EHRS+S    RSRS S
Sbjct: 124 RERTRDRDEDDLHRSRDYDRRRDNDKDRED--RRRHRPSSRGRSEHRSKS----RSRSPS 183

Query: 188 KSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQ 247
           KSKRISGFDMAPPTTA+L GAT AAGQ+PGT PAIPG+F  MFPLA+ Q FGALP+MPVQ
Sbjct: 184 KSKRISGFDMAPPTTALLPGATDAAGQVPGTNPAIPGLFSNMFPLASSQ-FGALPMMPVQ 243

Query: 248 AMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKF 307
           AMTQQATRHARRVYVGGLPPTANEQSVATFFS VM AIGGNTAGPGDAVVNVYINHEKKF
Sbjct: 244 AMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKF 303

Query: 308 AFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLT 367
           AFVEMRSVEEASNAMALDG+IFEG PVKVRRPSDYNPSLAATLGPSQP+PNLNLAAVG T
Sbjct: 304 AFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGST 363

Query: 368 PGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQ 427
           PGS+GGLEGPDRIFVGGLPYYFTE+Q+RELLESFG LRGFDLVKDRETGNSKGYAFCVYQ
Sbjct: 364 PGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQ 423

Query: 428 DLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGA 487
           D+SVTDIACAALNGIKMGDKTLTVRRANQG  QP PEQESVLLHAQQQIALQ+ MLQPGA
Sbjct: 424 DVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGA 483

Query: 488 VSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEA-APGVGK 547
           ++TKVLCLT+VVT +EL +D+DY+DI+EDMR E  KFG LVNVVIPRP PN    PG+GK
Sbjct: 484 LATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGK 543

Query: 548 VFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VFLEYAD+D ++KAR GLNGRKFGGNQV+AVFYPENKF++G+Y+A
Sbjct: 544 VFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYEA 555

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot
Match: Q8L716 (Splicing factor U2af large subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF65B PE=1 SV=2)

HSP 1 Score: 743.8 bits (1919), Expect = 1.5e-213
Identity = 429/595 (72.10%), Postives = 486/595 (81.68%), Query Frame = 0


Query: 8   YEGNGE----DADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDK 67
           YEGNG+      +N+ + +       S      H DSKS+  S D +++SSK  EK+ + 
Sbjct: 4   YEGNGDGVAISTENHNENY------ISLESSPFHEDSKSRE-SHDLKKDSSKISEKDNEN 63

Query: 68  GRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRG-E 127
           GRD++  +DRDR +DRDREKS+D  RDREK RDRDRDR++ +DR RDRHHRDRHRDR  E
Sbjct: 64  GRDKDGNKDRDREKDRDREKSRD--RDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRE 123

Query: 128 RREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSP-------- 187
           R E     DDD + R RD DRRR  D++RE RHRRRSRSRS+   E RSRS         
Sbjct: 124 RSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHR 183

Query: 188 SPTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPG--TTPAIPGMFPTMFPLATGQ 247
           S +RSRSRSKSKR SGFDMAPP   + + A AAAGQ+P   TT  IPGMF  MFP+  GQ
Sbjct: 184 SRSRSRSRSKSKRRSGFDMAPP-DMLAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQ 243

Query: 248 PFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 307
             GALPV+PVQAMTQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNTAGPGDAV
Sbjct: 244 QLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAV 303

Query: 308 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 367
           VNVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQPN
Sbjct: 304 VNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPN 363

Query: 368 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 427
           PNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE Q+RELLESFGPLRGF+LVKDRETG
Sbjct: 364 PNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 423

Query: 428 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQI 487
           NSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QGA QPKPEQE VLL+AQQQI
Sbjct: 424 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQI 483

Query: 488 ALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPR 547
           ALQ+LM QPG   TK++CLTQVVT ++L +DE+Y +IMEDMR EGGKFG LVNVVIPRP 
Sbjct: 484 ALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPN 543

Query: 548 P-NEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYD 587
           P ++  PGVGKVFLEYAD+D ++KAR+G+NGRKFGGNQV+AV+YPE+K+AQG+Y+
Sbjct: 544 PDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 588

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot
Match: O23212 (Splicing factor U2af large subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF65A PE=1 SV=2)

HSP 1 Score: 722.6 bits (1864), Expect = 3.5e-207
Identity = 418/595 (70.25%), Postives = 480/595 (80.67%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           M++++  +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++E
Sbjct: 1   MSEFED-HEGNGTVADAIYD----EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDRE 60

Query: 61  RDKGRDRERERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 120
           R+KGRD++RERD +   R RDRD EKS        K+R RD+DRD      R   HRD  
Sbjct: 61  REKGRDKDRERDSEVSRRSRDRDGEKS--------KERSRDKDRDHRERHHRSSRHRDHS 120

Query: 121 RDRGERREGGRGRDDDDYYRG--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPS 180
           R+RGERRE G GRDDDDY R   RD+DRRRD   +R  R  RRSRSRSK   E R+RS S
Sbjct: 121 RERGERRERG-GRDDDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP--GMFPTMFPLATGQP 240
           P++S+     +R+SGFDMAPP +A+L+   A  GQ+P   P +P  GMFP MFPL TGQ 
Sbjct: 181 PSKSK-----QRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQS 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
           FG L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVV
Sbjct: 241 FGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 360
           NVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           +LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGN
Sbjct: 361 HLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG    KPEQE+VLLHAQQQIA
Sbjct: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRP 540
            Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFG L NVVIPRP P
Sbjct: 481 FQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSP 540

Query: 541 N-EAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           N E   G+GKVFL+YAD D +T+AR G+NGRKFGGN+V+AV+YPE+KF QG+Y A
Sbjct: 541 NGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 573

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot
Match: Q2QZL4 (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=U2AF65B PE=3 SV=2)

HSP 1 Score: 704.1 bits (1816), Expect = 1.3e-201
Identity = 404/556 (72.66%), Postives = 457/556 (82.19%), Query Frame = 0


Query: 35  DTHTDSKSQHGSRDYERESSKSREKERDKGRDRERERDRDRGRDRDREKSKDGERDREKD 94
           DTH+        RD      K RE+E+DK R+R R+RDRDRGRDRDR+K      D+EKD
Sbjct: 20  DTHSREDGLSKPRD------KDREREKDKDRERHRDRDRDRGRDRDRDK------DKEKD 79

Query: 95  RDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDR 154
           RD++RDRD+DRD+DRDRHHR  HR+R E R+     DD D +R RD +RRRD++++   R
Sbjct: 80  RDKERDRDRDRDKDRDRHHR-HHRERREHRDRS---DDHDRHRSRDSERRRDHERDGRRR 139

Query: 155 HRRRSRSRSKGIHEHRSRSPSPTRSRSRSKSKRISGFDMAPPTTAILS--GATAAAGQIP 214
           HR RSRSRS+G  + RS      RSRSRSKSKR+SGFDMAPP  A++    A     Q P
Sbjct: 140 HRSRSRSRSRG-RDRRS------RSRSRSKSKRVSGFDMAPPAQAVVPQFPAIPTPSQFP 199

Query: 215 GTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVAT 274
           GT  AIPGMFP M P+  GQ F  L + P QAMTQQATRHARRVYVGGLPPTANEQSVA 
Sbjct: 200 GT--AIPGMFPNMLPMGVGQ-FNPLVIQP-QAMTQQATRHARRVYVGGLPPTANEQSVAI 259

Query: 275 FFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 334
           +F+QVMAAIGGNTAGPGDAV+NVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKV
Sbjct: 260 YFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKV 319

Query: 335 RRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRE 394
           RRP+DYNPSLAA LGPSQP+PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRE
Sbjct: 320 RRPTDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRE 379

Query: 395 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQ 454
           LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDL+VTDIACAALNGIKMGDKTLTVRRANQ
Sbjct: 380 LLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQ 439

Query: 455 GANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMED 514
           GA QP+PEQES+LL AQQQ+ LQKL+ Q GA+ TKV+CLTQVV+ +EL +DE+YEDIMED
Sbjct: 440 GAAQPRPEQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMED 499

Query: 515 MRGEGGKFGTLVNVVIPRPRPNE-AAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVM 574
           MR E GK+G L+ VVIPRP P+     GVGKVFLEYAD+D ATKA+  ++GRKFGGN V+
Sbjct: 500 MRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVV 548

Query: 575 AVFYPENKFAQGEYDA 588
           AVFYPENKF+  EYDA
Sbjct: 560 AVFYPENKFSSAEYDA 548

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL
Match: A0A0A0K920 (U2 snRNP auxiliary factor large subunit OS=Cucumis sativus OX=3659 GN=Csa_6G022350 PE=3 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 586/588 (99.66%), Postives = 586/588 (99.66%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR
Sbjct: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGAT-AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240
           SRSKSKRISGFDMAPPTTAILSGAT AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240

Query: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300
           MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH
Sbjct: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300

Query: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360
           EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360

Query: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420
           VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420

Query: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480
           CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ LML
Sbjct: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ-LML 480

Query: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540
           QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG
Sbjct: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540

Query: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL
Match: A0A1S3BCM3 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 PE=3 SV=1)

HSP 1 Score: 1088.2 bits (2813), Expect = 0.0e+00
Identity = 580/587 (98.81%), Postives = 581/587 (98.98%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RD DRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPVM 240
           SRSKSKRISGFDMAPPTTAILSGATAAAGQIPG TPAIPGMFPTMFPLATGQPFGALPVM
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAGQIPGATPAIPGMFPTMFPLATGQPFGALPVM 240

Query: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300
           PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE
Sbjct: 241 PVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHE 300

Query: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360
           KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV
Sbjct: 301 KKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAV 360

Query: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420
           GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC
Sbjct: 361 GLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFC 420

Query: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480
           VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ
Sbjct: 421 VYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLMLQ 480

Query: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540
           PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV
Sbjct: 481 PGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGV 540

Query: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 GKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL
Match: A0A1S3BDZ2 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 PE=3 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 580/588 (98.64%), Postives = 581/588 (98.81%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RD DRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGAT-AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240
           SRSKSKRISGFDMAPPTTAILSGAT AAAGQIPG TPAIPGMFPTMFPLATGQPFGALPV
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGATPAIPGMFPTMFPLATGQPFGALPV 240

Query: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300
           MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH
Sbjct: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300

Query: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360
           EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360

Query: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420
           VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420

Query: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480
           CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML
Sbjct: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480

Query: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540
           QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG
Sbjct: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540

Query: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL
Match: A0A1S4DVW1 (U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 PE=3 SV=1)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 579/588 (98.47%), Postives = 580/588 (98.64%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60

Query: 61  RDKGRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120
           RDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR
Sbjct: 61  RDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDR 120

Query: 121 GERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTRSR 180
           GERREGGR RDDDDYYR RD DRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSR
Sbjct: 121 GERREGGRSRDDDDYYRSRDCDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSR 180

Query: 181 SRSKSKRISGFDMAPPTTAILSGAT-AAAGQIPGTTPAIPGMFPTMFPLATGQPFGALPV 240
           SRSKSKRISGFDMAPPTTAILSGAT AAAGQIPG TPAIPGMFPTMFPLATGQPFGALPV
Sbjct: 181 SRSKSKRISGFDMAPPTTAILSGATAAAAGQIPGATPAIPGMFPTMFPLATGQPFGALPV 240

Query: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300
           MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH
Sbjct: 241 MPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINH 300

Query: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360
           EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA
Sbjct: 301 EKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAA 360

Query: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420
           VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF
Sbjct: 361 VGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAF 420

Query: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLML 480
           CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ LML
Sbjct: 421 CVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ-LML 480

Query: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540
           QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG
Sbjct: 481 QPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPG 540

Query: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA
Sbjct: 541 VGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL
Match: A0A6J1EVD6 (U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC111436322 PE=3 SV=1)

HSP 1 Score: 1057.0 bits (2732), Expect = 2.9e-305
Identity = 566/589 (96.10%), Postives = 575/589 (97.62%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           MTDYD RYEGNGEDADNYGDGFSPQAR  SHGGHDTH+DSKSQHGSR+YERESSKSREKE
Sbjct: 1   MTDYDGRYEGNGEDADNYGDGFSPQARGGSHGGHDTHSDSKSQHGSREYERESSKSREKE 60

Query: 61  RDKGRDRE--RERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHR 120
           RDKGRDRE  RERDRDRGR+RDREKSKDGERDREK  DR+RDRDKDRDRDRDRHHRDRHR
Sbjct: 61  RDKGRDREKDRERDRDRGRERDREKSKDGERDREK--DRERDRDKDRDRDRDRHHRDRHR 120

Query: 121 DRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPTR 180
           DRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGI EHRSRSPSP+R
Sbjct: 121 DRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIPEHRSRSPSPSR 180

Query: 181 SRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIPGMFPTMFPLATGQPFGALP 240
           SRSRSKSKRISGFDMAPPTTAIL GATA AGQIPGTTPAIPGMFPTMFPLATGQPFGALP
Sbjct: 181 SRSRSKSKRISGFDMAPPTTAILPGATAVAGQIPGTTPAIPGMFPTMFPLATGQPFGALP 240

Query: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300
           VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN
Sbjct: 241 VMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYIN 300

Query: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLA 360
           HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+PNLNLA
Sbjct: 301 HEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLA 360

Query: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420
           AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA
Sbjct: 361 AVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYA 420

Query: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQKLM 480
           FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG NQPKPEQESVLLHAQQQIALQKLM
Sbjct: 421 FCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQESVLLHAQQQIALQKLM 480

Query: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAP 540
           LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG LVNVVIPRPRPNEAAP
Sbjct: 481 LQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGALVNVVIPRPRPNEAAP 540

Query: 541 GVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           GVGKVFLEYADI+SATKAR+GLNGRKFGGNQV+AVFYPENKFAQGEYDA
Sbjct: 541 GVGKVFLEYADIESATKARSGLNGRKFGGNQVIAVFYPENKFAQGEYDA 587

[Close]

BLAST of CsaV3_6G003130 vs. TAIR 10
Match: AT1G60900.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 743.8 bits (1919), Expect = 1.1e-214
Identity = 429/595 (72.10%), Postives = 486/595 (81.68%), Query Frame = 0


Query: 8   YEGNGE----DADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDK 67
           YEGNG+      +N+ + +       S      H DSKS+  S D +++SSK  EK+ + 
Sbjct: 4   YEGNGDGVAISTENHNENY------ISLESSPFHEDSKSRE-SHDLKKDSSKISEKDNEN 63

Query: 68  GRDRERERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRG-E 127
           GRD++  +DRDR +DRDREKS+D  RDREK RDRDRDR++ +DR RDRHHRDRHRDR  E
Sbjct: 64  GRDKDGNKDRDREKDRDREKSRD--RDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRE 123

Query: 128 RREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSP-------- 187
           R E     DDD + R RD DRRR  D++RE RHRRRSRSRS+   E RSRS         
Sbjct: 124 RSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHR 183

Query: 188 SPTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPG--TTPAIPGMFPTMFPLATGQ 247
           S +RSRSRSKSKR SGFDMAPP   + + A AAAGQ+P   TT  IPGMF  MFP+  GQ
Sbjct: 184 SRSRSRSRSKSKRRSGFDMAPP-DMLAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQ 243

Query: 248 PFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAV 307
             GALPV+PVQAMTQQATRHARRVYVGGLPPTANEQSV+TFFSQVM+AIGGNTAGPGDAV
Sbjct: 244 QLGALPVLPVQAMTQQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAV 303

Query: 308 VNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPN 367
           VNVYINHEKKFAFVEMRSVEEASNAMALDGII EG PVKVRRP+DYNPSLAATLGPSQPN
Sbjct: 304 VNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPN 363

Query: 368 PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 427
           PNLNL AVGL+ GS GGLEGPDRIFVGGLPYYFTE Q+RELLESFGPLRGF+LVKDRETG
Sbjct: 364 PNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 423

Query: 428 NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQI 487
           NSKGYAFCVYQD SVTDIACAALNGIKMGDKTLTVRRA QGA QPKPEQE VLL+AQQQI
Sbjct: 424 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQI 483

Query: 488 ALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPR 547
           ALQ+LM QPG   TK++CLTQVVT ++L +DE+Y +IMEDMR EGGKFG LVNVVIPRP 
Sbjct: 484 ALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPN 543

Query: 548 P-NEAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYD 587
           P ++  PGVGKVFLEYAD+D ++KAR+G+NGRKFGGNQV+AV+YPE+K+AQG+Y+
Sbjct: 544 PDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 588

[Close]

BLAST of CsaV3_6G003130 vs. TAIR 10
Match: AT4G36690.1 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 722.6 bits (1864), Expect = 2.5e-208
Identity = 418/595 (70.25%), Postives = 480/595 (80.67%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           M++++  +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++E
Sbjct: 1   MSEFED-HEGNGTVADAIYD----EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDRE 60

Query: 61  RDKGRDRERERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 120
           R+KGRD++RERD +   R RDRD EKS        K+R RD+DRD      R   HRD  
Sbjct: 61  REKGRDKDRERDSEVSRRSRDRDGEKS--------KERSRDKDRDHRERHHRSSRHRDHS 120

Query: 121 RDRGERREGGRGRDDDDYYRG--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPS 180
           R+RGERRE G GRDDDDY R   RD+DRRRD   +R  R  RRSRSRSK   E R+RS S
Sbjct: 121 RERGERRERG-GRDDDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP--GMFPTMFPLATGQP 240
           P++S+     +R+SGFDMAPP +A+L+   A  GQ+P   P +P  GMFP MFPL TGQ 
Sbjct: 181 PSKSK-----QRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQS 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
           FG L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVV
Sbjct: 241 FGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 360
           NVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           +LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGN
Sbjct: 361 HLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG    KPEQE+VLLHAQQQIA
Sbjct: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRP 540
            Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFG L NVVIPRP P
Sbjct: 481 FQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSP 540

Query: 541 N-EAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           N E   G+GKVFL+YAD D +T+AR G+NGRKFGGN+V+AV+YPE+KF QG+Y A
Sbjct: 541 NGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 573

[Close]

BLAST of CsaV3_6G003130 vs. TAIR 10
Match: AT4G36690.4 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 700.3 bits (1806), Expect = 1.3e-201
Identity = 403/593 (67.96%), Postives = 463/593 (78.08%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           M++++  +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++E
Sbjct: 1   MSEFED-HEGNGTVADAIYD----EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDRE 60

Query: 61  RDKGRDRERERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 120
           R+KGRD++RERD +   R RDRD EKS        K+R RD+DRD      R   HRD  
Sbjct: 61  REKGRDKDRERDSEVSRRSRDRDGEKS--------KERSRDKDRDHRERHHRSSRHRDHS 120

Query: 121 RDRGERREGGRGRDDDDYYRGRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPSPT 180
           R+RGERRE G G                        R  RRSRSRSK   E R+RS SP+
Sbjct: 121 RERGERRERGGG------------------------RRSRRSRSRSKDRSERRTRSRSPS 180

Query: 181 RSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP--GMFPTMFPLATGQPFG 240
           +S+     +R+SGFDMAPP +A+L+   A  GQ+P   P +P  GMFP MFPL TGQ FG
Sbjct: 181 KSK-----QRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQSFG 240

Query: 241 ALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVVNV 300
            L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVVNV
Sbjct: 241 GLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNV 300

Query: 301 YINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL 360
           YINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P+L
Sbjct: 301 YINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPHL 360

Query: 361 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 420
           NLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGNSK
Sbjct: 361 NLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSK 420

Query: 421 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIALQ 480
           GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG    KPEQE+VLLHAQQQIA Q
Sbjct: 421 GYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIAFQ 480

Query: 481 KLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPN- 540
           ++MLQPGAV+T V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFG L NVVIPRP PN 
Sbjct: 481 RVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNG 540

Query: 541 EAAPGVGKVFLEYADIDSATKARAGLNGRKFGGNQVMAVFYPENKFAQGEYDA 588
           E   G+GKVFL+YAD D +T+AR G+NGRKFGGN+V+AV+YPE+KF QG+Y A
Sbjct: 541 EPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDYGA 551

[Close]

BLAST of CsaV3_6G003130 vs. TAIR 10
Match: AT4G36690.2 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 627.5 bits (1617), Expect = 1.1e-179
Identity = 373/528 (70.64%), Postives = 425/528 (80.49%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           M++++  +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++E
Sbjct: 1   MSEFED-HEGNGTVADAIYD----EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDRE 60

Query: 61  RDKGRDRERERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 120
           R+KGRD++RERD +   R RDRD EKS        K+R RD+DRD      R   HRD  
Sbjct: 61  REKGRDKDRERDSEVSRRSRDRDGEKS--------KERSRDKDRDHRERHHRSSRHRDHS 120

Query: 121 RDRGERREGGRGRDDDDYYRG--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPS 180
           R+RGERRE G GRDDDDY R   RD+DRRRD   +R  R  RRSRSRSK   E R+RS S
Sbjct: 121 RERGERRERG-GRDDDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP--GMFPTMFPLATGQP 240
           P++S+     +R+SGFDMAPP +A+L+   A  GQ+P   P +P  GMFP MFPL TGQ 
Sbjct: 181 PSKSK-----QRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQS 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
           FG L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVV
Sbjct: 241 FGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 360
           NVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           +LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGN
Sbjct: 361 HLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG    KPEQE+VLLHAQQQIA
Sbjct: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFG 522
            Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y DIMEDMR EGGKFG
Sbjct: 481 FQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFG 506

[Close]

BLAST of CsaV3_6G003130 vs. TAIR 10
Match: AT4G36690.3 (U2 snRNP auxilliary factor, large subunit, splicing factor )

HSP 1 Score: 625.5 bits (1612), Expect = 4.2e-179
Identity = 372/527 (70.59%), Postives = 424/527 (80.46%), Query Frame = 0


Query: 1   MTDYDSRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKE 60
           M++++  +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++E
Sbjct: 1   MSEFED-HEGNGTVADAIYD----EENGGRDGEIEDQLDSKPKRESRDHERETSRSKDRE 60

Query: 61  RDKGRDRERERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRH 120
           R+KGRD++RERD +   R RDRD EKS        K+R RD+DRD      R   HRD  
Sbjct: 61  REKGRDKDRERDSEVSRRSRDRDGEKS--------KERSRDKDRDHRERHHRSSRHRDHS 120

Query: 121 RDRGERREGGRGRDDDDYYRG--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHRSRSPS 180
           R+RGERRE G GRDDDDY R   RD+DRRRD   +R  R  RRSRSRSK   E R+RS S
Sbjct: 121 RERGERRERG-GRDDDDYRRSRDRDHDRRRD---DRGGRRSRRSRSRSKDRSERRTRSRS 180

Query: 181 PTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGQIPGTTPAIP--GMFPTMFPLATGQP 240
           P++S+     +R+SGFDMAPP +A+L+   A  GQ+P   P +P  GMFP MFPL TGQ 
Sbjct: 181 PSKSK-----QRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAGMFPNMFPLPTGQS 240

Query: 241 FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 300
           FG L +MP+QAMTQQATRHARRVYVGGL PTANEQSVATFFSQVMAA+GGNTAGPGDAVV
Sbjct: 241 FGGLSMMPIQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVV 300

Query: 301 NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 360
           NVYINHEKKFAFVEMRSVEEASNAM+LDGIIFEGAPVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 301 NVYINHEKKFAFVEMRSVEEASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSP 360

Query: 361 NLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGN 420
           +LNLAAVGLTPG++GGLEGPDRIFVGGLPYYFTE+QVRELLESFG L+GFDLVKDRETGN
Sbjct: 361 HLNLAAVGLTPGASGGLEGPDRIFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGN 420

Query: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQQIA 480
           SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG    KPEQE+VLLHAQQQIA
Sbjct: 421 SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTMLQKPEQENVLLHAQQQIA 480

Query: 481 LQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYEDIMEDMRGEGGKF 521
            Q++MLQPGAV+T V+CLTQVVT +EL +DE+Y DIMEDMR EGGKF
Sbjct: 481 FQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKF 505

The following BLAST results are available for this feature:

BLAST of CsaV3_6G003130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138355.1	0.0e+00	100.00	splicing factor U2af large subunit A isoform X7 [Cucumis sativus] >KAE8646604.1 ...	[more]
XP_011656493.1	0.0e+00	99.83	splicing factor U2af large subunit A isoform X6 [Cucumis sativus]	[more]
XP_008445608.1	0.0e+00	98.81	PREDICTED: splicing factor U2af large subunit A-like isoform X3 [Cucumis melo]	[more]
XP_008445607.1	0.0e+00	98.64	PREDICTED: splicing factor U2af large subunit A-like isoform X1 [Cucumis melo]	[more]
XP_038884483.1	0.0e+00	97.96	splicing factor U2af large subunit B isoform X9 [Benincasa hispida]	[more]

BLAST of CsaV3_6G003130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR40	1.4e-235	77.72	Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia OX=4092 GN=U2A...	[more]
Q9ZR39	1.2e-228	76.75	Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia OX=4092 GN=U2A...	[more]
Q8L716	1.5e-213	72.10	Splicing factor U2af large subunit B OS=Arabidopsis thaliana OX=3702 GN=U2AF65B ...	[more]
O23212	3.5e-207	70.25	Splicing factor U2af large subunit A OS=Arabidopsis thaliana OX=3702 GN=U2AF65A ...	[more]
Q2QZL4	1.3e-201	72.66	Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of CsaV3_6G003130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K920	0.0e+00	99.66	U2 snRNP auxiliary factor large subunit OS=Cucumis sativus OX=3659 GN=Csa_6G0223...	[more]
A0A1S3BCM3	0.0e+00	98.81	U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 ...	[more]
A0A1S3BDZ2	0.0e+00	98.64	U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 ...	[more]
A0A1S4DVW1	0.0e+00	98.47	U2 snRNP auxiliary factor large subunit OS=Cucumis melo OX=3656 GN=LOC103488581 ...	[more]
A0A6J1EVD6	2.9e-305	96.10	U2 snRNP auxiliary factor large subunit OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CsaV3_6G003130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60900.1	1.1e-214	72.10	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.1	2.5e-208	70.25	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.4	1.3e-201	67.96	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.2	1.1e-179	70.64	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]
AT4G36690.3	4.2e-179	70.59	U2 snRNP auxilliary factor, large subunit, splicing factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 255..333 e-value: 6.0E-13 score: 59.0 coord: 488..574 e-value: 0.056 score: 17.7 coord: 375..448 e-value: 9.2E-21 score: 85.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 376..445 e-value: 6.8E-17 score: 61.1 coord: 518..570 e-value: 5.5E-5 score: 22.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 374..452 score: 15.51092
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 254..337 score: 12.696778
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 487..578 score: 9.012812
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 349..464 e-value: 1.9E-21 score: 78.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 249..348 e-value: 2.2E-31 score: 110.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 483..586 e-value: 6.1E-31 score: 108.5
IPR006529	U2 snRNP auxilliary factor, large subunit, splicing factor	TIGRFAM	TIGR01642	TIGR01642	coord: 77..585 e-value: 2.1E-189 score: 628.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..195
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 1..586
None	No IPR available	PANTHER	PTHR23139:SF121	U2 SNRNP AUXILIARY FACTOR LARGE SUBUNIT	coord: 1..586
None	No IPR available	CDD	cd12231	RRM2_U2AF65	coord: 374..450 e-value: 1.53368E-44 score: 150.459
None	No IPR available	CDD	cd12230	RRM1_U2AF65	coord: 253..335 e-value: 2.76526E-41 score: 141.909
None	No IPR available	CDD	cd12232	RRM3_U2AF65	coord: 486..573 e-value: 4.89921E-38 score: 133.45
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 375..577
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 254..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G003130.1	CsaV3_6G003130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding