CsaV3_6G002590 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCAAATATGGTATATTTGTAATTAATAATACAGCTCGGAATCATCTATAAATATTTCCCCATTCCCTTCCCAAAATTACCAACACATCCAATTTAGAAGAATAATACAATATCTCAACTACAAAAACCACTATGTCGGAGGAAAACCGCCACCACGGCCACCACCACAGCCTCTTCCATCGCCACAAGGAGGACGAGGAAAATGTCCCCTCTAAAACCTCCACTTACTCTGAAGACCTCTCTGAAGACAAACTCGATGCTTACGGAAGTGCCTACGGCGGCTCAGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGCTATGGGGAGTCTCACAATAAGGTCGCTGAGTACGGTAGTCGGTACGGAGAGTTGGAAGATAAGGCTGGCGAGTACGGCGGTGGTTATGGTCTGTCTGAAAATAAAGTCGCCACTGAGTACGGTGGTCAGTTGGAAGATAAGGTAGATGAATACGGTGACGGGTATCGTAAGTCTGAAAGTAAGGTCACTGCCGAGTACGGTGGTGGGTACGGTGAGTCGGGAGATAAGGGCGGTGAATACGGGGGAGGGTATGGTGAGTCAGAACGTAAAGAAGACGAATACGATGGTGGGTATAGTAAGGGTAGACGTAAATCCGGGGAGTACGGTGGTGGAATGGAAGAAGAGGGCGGGGAGTACGGCGGTGTATACAAAAAAGAATATGAGGGAGGAAATGAAGATGAGAATTCAGATAAGGAAGATTACAAAAAGGAAGGGAAACACCATAAACACCTTGAGCACCTTGGCGAGCTTGGTGCCGCCGGCGCCGGTGCCTTTGCCTTGGTATAAATATATATTTTTATATAACTCTCATTTCGTCATTCTTTCTTCAATATAACTATTATTATTACTATTTATTAAAACAATATCAAAACTGTCTAAGTTTCAAATCAATGTTAAGTTTTTTTTTTTTTTCGGGTTTAATTTTGATTCGAATTTAATCATTAAATTTGAAAGGGTTATAATTTTATATTTAAATTTTGTTTTACCCTTTAATTAAACTATGCCTCCACTAAATAAATATTTCTAGAGAATCTTTAAGATGAATGTTTATTAATTAATTACAATTAATTATGAAGAATGATTTGAGGAGGTTTTGTCAAATATAATATAACCAAATTTTAGAATCTATTGATAAATTTTAAAATTTTACGGTAGGATTTTGTAAAATTTTAAAAGTAATCATGAAAATATTTAAGAAACTTAATTAGTTAGAATGTTTTAAATTAATTAATAGGAATTAATATTAGATATTTAAATGGAGTATTCAATGATACACGTGTTAAAATTTGAAACATAAAGAGCATAAATTAAAATAAAACTTAACTTTCAATCACAAAATTTTAAAATTTTAAAATATTAAAATATTAAAATCAAACTCAAAACTTACAAAATAAAACCATAACCTACTTTATTTACAATTAGAAAGGAATTTTTTTAAATCTTTTTTCTTATCCATGAAAACTATTTGAAATGGGATTAAAATAAAAACGTTGTTATTAAAAATATTTGTTTAGTCTATAATTAATTACTGTTTAATGGATTTTCGCAACTTTCATTGACAAATATAATATTTGATGATCGTTTTTTAGTAATCATTACTATAACCTCTTATCATCGTTTTCTAACAACCGTTATTAACCACCATCTTTGGTGACTGTTTTCCAACTACCATCGACACCTAACTCCAACTCATAACCTCCGCAGACAAATTATTTAATTGTAATTTGGATTCTATAAAACACTTTTAATAAATTATCAAATCATACAAACTATTACATAAAAATAATTTTGCAAAAACAAAATAAATCCAAAAACATGTTTTTCATTTTATTTTTATATTTTTGAAGAGTTTTAATCAATGTGTTTAAAGGTAAATGTATTTTTGAAAAATACTTTTTTTTTAATAGTTATTTCAAACTGATTCTAAGCTAAAGTTTTTTTTAGTCATTTCAAGTTTTTCAAAATTAGTTTCCAATATGTACTAAAAAGTTTTTTTGATATACAAATTACAATTAAAATATGACAAAATACCAAAAGATGTGTATTTTACCCTTTTGGTAAGTAAACAACAATATTTTAATTAATGAGTATAAAAGCATAAAAAATCAAACCTTTGACCAATTAAATGATTGAACTATTAACTTATAAAAGAATTTATTTTAACGTCAATTTATGTGACTGAGCTTTTCACATTGCCTGCAAATGCAATATAATTTCAGCATGAGAAGCATGAGGCAAAAGAGGATTCAGAGCATGGACACAGGCACAAGCTAGAGGAGGAGATAGCGGCGGTGGCCGCGGTTGGAGCGGGTGGCTTTGCATTTCATGAGCACCGTGAAAAGGAAGAGGCAGAAGAGGAAGATGAAAAGGCTAATGGAAAGAAGCATCACCATATATTCTAAATGAAACCCTCAATATAATTTCCACAGTAATCTTGTTGTCCATTTCGAAAGTTAATTACTATGAAATACATGTGTGTTTTAAAACTTAAATAATTAAATAAACTAAATAAAAATGGTTGCGTTTTTGTAAAAGTATGGTTTCAAAAGAAGTGTCATGTGTTTTTCTTTTTTCTATATGTATATTGTGTAATGTGTGGTCTCTCTAATATAATAGTGGTGTCTCTCTTTGGGCTTGTTTTGTGCTTAATTTTCTTTTGCTATGTTATTTCTTTCTCTCTTGTGTAAAGAGTTTAGTGGAGATGTAATGTGTTTAGCTATACGTGTCTTCAATACTTGATATTCAACTTCTTCTTCTTATTTTAATATATTCGATCCATTAATAGCAACTGTCATAGTAGTTAGTTTTTCTTGTAGTGCGCCATGCATACATATGATTTAGTGATTAACTAAATACTCAAAACCACATAAATAATAATAAGTAGTTGAATTAGTTAAAACATGATAGATTTTAGATCAAACAATGCTCAAGTTCCCATATAAAACCTCAATTAATTTGAGATCG ATGTCGGAGGAAAACCGCCACCACGGCCACCACCACAGCCTCTTCCATCGCCACAAGGAGGACGAGGAAAATGTCCCCTCTAAAACCTCCACTTACTCTGAAGACCTCTCTGAAGACAAACTCGATGCTTACGGAAGTGCCTACGGCGGCTCAGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGCTATGGGGAGTCTCACAATAAGGTCGCTGAGTACGGTAGTCGGTACGGAGAGTTGGAAGATAAGGCTGGCGAGTACGGCGGTGGTTATGGTCTGTCTGAAAATAAAGTCGCCACTGAGTACGGTGGTCAGTTGGAAGATAAGGTAGATGAATACGGTGACGGGTATCGTAAGTCTGAAAGTAAGGTCACTGCCGAGTACGGTGGTGGGTACGGTGAGTCGGGAGATAAGGGCGGTGAATACGGGGGAGGGTATGGTGAGTCAGAACGTAAAGAAGACGAATACGATGGTGGGTATAGTAAGGGTAGACGTAAATCCGGGGAGTACGGTGGTGGAATGGAAGAAGAGGGCGGGGAGTACGGCGGTGTATACAAAAAAGAATATGAGGGAGGAAATGAAGATGAGAATTCAGATAAGGAAGATTACAAAAAGGAAGGGAAACACCATAAACACCTTGAGCACCTTGGCGAGCTTGGTGCCGCCGGCGCCGGTGCCTTTGCCTTGCATGAGAAGCATGAGGCAAAAGAGGATTCAGAGCATGGACACAGGCACAAGCTAGAGGAGGAGATAGCGGCGGTGGCCGCGGTTGGAGCGGGTGGCTTTGCATTTCATGAGCACCGTGAAAAGGAAGAGGCAGAAGAGGAAGATGAAAAGGCTAATGGAAAGAAGCATCACCATATATTCTAA ATGTCGGAGGAAAACCGCCACCACGGCCACCACCACAGCCTCTTCCATCGCCACAAGGAGGACGAGGAAAATGTCCCCTCTAAAACCTCCACTTACTCTGAAGACCTCTCTGAAGACAAACTCGATGCTTACGGAAGTGCCTACGGCGGCTCAGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGCTATGGGGAGTCTCACAATAAGGTCGCTGAGTACGGTAGTCGGTACGGAGAGTTGGAAGATAAGGCTGGCGAGTACGGCGGTGGTTATGGTCTGTCTGAAAATAAAGTCGCCACTGAGTACGGTGGTCAGTTGGAAGATAAGGTAGATGAATACGGTGACGGGTATCGTAAGTCTGAAAGTAAGGTCACTGCCGAGTACGGTGGTGGGTACGGTGAGTCGGGAGATAAGGGCGGTGAATACGGGGGAGGGTATGGTGAGTCAGAACGTAAAGAAGACGAATACGATGGTGGGTATAGTAAGGGTAGACGTAAATCCGGGGAGTACGGTGGTGGAATGGAAGAAGAGGGCGGGGAGTACGGCGGTGTATACAAAAAAGAATATGAGGGAGGAAATGAAGATGAGAATTCAGATAAGGAAGATTACAAAAAGGAAGGGAAACACCATAAACACCTTGAGCACCTTGGCGAGCTTGGTGCCGCCGGCGCCGGTGCCTTTGCCTTGCATGAGAAGCATGAGGCAAAAGAGGATTCAGAGCATGGACACAGGCACAAGCTAGAGGAGGAGATAGCGGCGGTGGCCGCGGTTGGAGCGGGTGGCTTTGCATTTCATGAGCACCGTGAAAAGGAAGAGGCAGAAGAGGAAGATGAAAAGGCTAATGGAAAGAAGCATCACCATATATTCTAA MSEENRHHGHHHSLFHRHKEDEENVPSKTSTYSEDLSEDKLDAYGSAYGGSENKVAAEYGGGYGESHNKVAEYGSRYGELEDKAGEYGGGYGLSENKVATEYGGQLEDKVDEYGDGYRKSESKVTAEYGGGYGESGDKGGEYGGGYGESERKEDEYDGGYSKGRRKSGEYGGGMEEEGGEYGGVYKKEYEGGNEDENSDKEDYKKEGKHHKHLEHLGELGAAGAGAFALHEKHEAKEDSEHGHRHKLEEEIAAVAAVGAGGFAFHEHREKEEAEEEDEKANGKKHHHIF* Homology
BLAST of CsaV3_6G002590 vs. NCBI nr
Match: XP_004138380.1 (glycine-rich cell wall structural protein 1.8 [Cucumis sativus] >KGN45863.1 hypothetical protein Csa_005251 [Cucumis sativus]) HSP 1 Score: 554.3 bits (1427), Expect = 6.3e-154 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. NCBI nr
Match: XP_008463082.1 (PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis melo]) HSP 1 Score: 431.0 bits (1107), Expect = 8.0e-117 Identity = 237/289 (82.01%), Postives = 248/289 (85.81%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. NCBI nr
Match: XP_038886393.1 (keratin, type I cytoskeletal 9-like [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 6.2e-85 Identity = 195/301 (64.78%), Postives = 213/301 (70.76%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. NCBI nr
Match: XP_022932803.1 (keratin, type I cytoskeletal 9-like [Cucurbita moschata]) HSP 1 Score: 292.0 bits (746), Expect = 5.8e-75 Identity = 190/327 (58.10%), Postives = 213/327 (65.14%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. NCBI nr
Match: XP_023520940.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 289.7 bits (740), Expect = 2.9e-74 Identity = 189/326 (57.98%), Postives = 210/326 (64.42%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy Swiss-Prot
Match: P37219 (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.8e-26 Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy Swiss-Prot
Match: Q08655 (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum OX=4081 GN=ASR1 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.4e-25 Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy Swiss-Prot
Match: P37220 (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum OX=4081 GN=ASR3 PE=3 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy Swiss-Prot
Match: A2ZBV1 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ASR5 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.1e-23 Identity = 69/130 (53.08%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy Swiss-Prot
Match: Q53JF7 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ASR5 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.1e-23 Identity = 69/130 (53.08%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy TrEMBL
Match: A0A0A0K8U6 (Abscisic stress ripening-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014830 PE=3 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 3.0e-154 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy TrEMBL
Match: A0A1S3CID8 (keratin, type I cytoskeletal 9-like OS=Cucumis melo OX=3656 GN=LOC103501317 PE=3 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.9e-117 Identity = 237/289 (82.01%), Postives = 248/289 (85.81%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy TrEMBL
Match: A0A6J1F2S3 (keratin, type I cytoskeletal 9-like OS=Cucurbita moschata OX=3662 GN=LOC111439263 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 2.8e-75 Identity = 190/327 (58.10%), Postives = 213/327 (65.14%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy TrEMBL
Match: A0A6J1DFD1 (uncharacterized protein At5g39570-like OS=Momordica charantia OX=3673 GN=LOC111019988 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66 Identity = 194/383 (50.65%), Postives = 212/383 (55.35%), Query Frame = 0
BLAST of CsaV3_6G002590 vs. ExPASy TrEMBL
Match: A0A6J1ICX0 (keratin, type I cytoskeletal 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472650 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 2.4e-58 Identity = 169/326 (51.84%), Postives = 196/326 (60.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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