CsaV3_6G000880 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCGAATTAAAACTTACGTTTATTATTTATATAGTATAGATTCATCATAATTTACAAGTAATAAGTTTTTCTTTTTTTTTTTACTATATAAACCATCAATAAATAAATATAGACAAAAATATGGACTATGTGGGTAAAAGTTTAAGACATTGCTCAAATCTTTGAAGAGCAAAGTATATTAGAGTAAAAGGCCCATCATTGTTCTCACGCGCCGTCGTTTGTTGCTTGATTTCCGAAAGAGCTAGCGCGTGAATCTCTTCACGCGCCACCTGTTAGAATTAAGAAAACGAATCTCGAAGATTTGAGGGTGGGAATAAGGCGGCGCGTGGAACTCACGTAGACCAAGCCACTATGCATTCACTGTATTAAGGAAAACAATTTAGGTTTGCGGTGTGGGTTTAGGTTACTGCTTGACAGTGCATGGGTTTTGAAAAATTTAGGAGAGAGTGGTTCTCTCAAATACCCTCAAATCTCCACCATCTCCCTCTCTTCACTTTCTCTCACAAAGGTTTCTTCTTTTTCTCTCTCCTACTCTGCCAATTCTTGTTTGGACTCAAATTTTTCCTCTTCTTTCTTTTTTATTTGGTACTACAAAGGCTGCCCAAAAAATAAACCTCACTCTCCATCTTTTTCAACAAAAGCATAATTCTACTTGTGCTCTTCATCTTCTTCATCTCTCTCTCTCTCTCTCTCTCTCTAATCAATAACCCATTTCTTCTTATCCTTTTTCTCTTCATTCTTCATCCATTCATCTCTCTCAATAAACTCAACATAACTATGAAGGTTTCTTCTTTCTCTATCTTTTAATTTCTTACGTTGATCTCATAAATTGAGTTTTTTTTCCCCTTTTCTGAGAATCTAAGACATGGGTTTCAGAGCTTGGATTCTTTCATGGTGGATTCCCCTCCAAAAAAATTGATCTTTTTGAACTTTTTCTTGGATTTTGATTATATTTCTATTTTGGGTTTTCCCTTTTGATAAAATTAGGGTATTTTTTCTTTTAAATTGATGATATGTGGATGGATCCTTATCTATAGATCTCTTTATTCTTATTCTTATTCTTATTCTAATTCCTTTGTTTTTTTTGGGTTTGGCAGAAGTTAATATTGAAATTGGATTTACATGATGACAAAGCTAAGCAGAAGGCTTTGAAGACAGTTTCTGCACTTTCAGGTTCTTTTTATTTTTCTCTCTATTTATTTATTTATTTTCTCTAAAGTGAAGCTAATTAATTAATTTTGTATCTAACTTAGATTGCTTAGAGACAAAATCTCTTTAAACTCTTTTTAAAAATTACATATAAATGTCTCTCTCAAAAGAAATTCTGCGTTGGGTGTGATGTATGTATATGTTGATTGTTGAGAGATTTTGATCCTCTAACTTACCCCAACCCCACCACCAAACCTAACCCACATGCCCTTTCCTTTGGCTGCTTTAATTTTCACTGATCTTTATTAAATTATTATAGAAAAAAATGATTAAGGTTTTCTTTAATCATAAAAAAAAAACCACTTTCAAATGTTTCCCATCCACAATAATATTATATTTACTACATAATCACTGTTCAAAAGGTTGATTTGATCTCATAAGGAATATTCTCTCCATAGAAACAAAAAGATGTCTCATCTAATCTAACAGATATGAAATTATTTAGGTACCAGTTATATTTAATTTTTTTAAAAGAAGTATTTTTAATTAAAATGAAATCCATCTGTTGGTATTATAATTACTGTTTTTCAAAACGAAATGACAATGGAAGGATGGAGGAGTTTGAACATCAACATGTAAAATTACTACTACTATCAAATCACAAAAGCTTAGTCAACGAGTTTTGGGTTAGAACTTATTCTTTTCAACGAAGATATGTAACAATGTATACAGATTTTTGTCACTAATTCGACTCCTATCAGCCATATAATTGATCATTCAGTTGAAAGGACTCTAAGAATAATTGACCTAAATTAGATATGATCGTTATATATTTGCGTCTTTCTTTAAATAAACTTTACTTTGATCGGATTGTAGGGATTGATTTAATTGCAATGGACATGAAAGAGAGGAAGCTAACAGTAATTGGGACAGTGGATCCGGTGAATGTAGTAAGCAAATTGAGGAAATATTGGCCAACACATATAATTTCAGTAGGGCCAGCAGTAGAGCCCAAGAAGGAAGAACCAAAGAAGGAGGAGCCCAAAAAAGAGGAAGGGAAGAAAGAAGAGGAAGGCAAGAAGGAGGAGCCAAAGAAAGAAGGAGATGACAAAAAAGACGAAGCAAAGAAAGACGAGTCGAAGAAGGACGATGACAAAAAAGATGAGCCAAAGAAGGAAGGTGAAAAGAAGGAAGAAGAGAAGAAGAAAGAGCAACCGCAAGTAGCTGTGCCAGTACCAATGCCAATGCCGATGCAGATGCCGATGCCGATGCCAATGCCGATGCACATGCAACAGCATGACCCAAGAATAATGGAGATGGTTAAGGCTTATAGAGCATATAACCCTCATTTGACCACTTATTATCATGTTCAAAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTAAGTTCTACTTTTCTATATCTATGGAGCCTTTTTGGAAACTTTTGGTGATATATATATGCATTTGAAGCTAAAGCTCTCTTTTGTAAATAAAAAAAAAAAAAACACAATTATTATGCCTTTTTTGGTGTTTTGTTAACTACCCAAGTATTTTATTTTCATTTGTCTAGAAATATTCAATAAATTTTGTTTTCTTTTGCAGAAATGTTGTTAATATTGTTTGGTATTCGTCATGTCTTTCGAGAAGAACAAATTTATTCATGTTATTGTGGCTCTTGACATCCTTTTAAGGCTTCTTTTTCATTGAAAAATATGTATTTCTTGATAGTACTACCTTCCTTCGTCATGGATGGTGTTGCGTTGGCTGTTTGTCTTGGGGC ATGAAGTTAATATTGAAATTGGATTTACATGATGACAAAGCTAAGCAGAAGGCTTTGAAGACAGTTTCTGCACTTTCAGGGATTGATTTAATTGCAATGGACATGAAAGAGAGGAAGCTAACAGTAATTGGGACAGTGGATCCGGTGAATGTAGTAAGCAAATTGAGGAAATATTGGCCAACACATATAATTTCAGTAGGGCCAGCAGTAGAGCCCAAGAAGGAAGAACCAAAGAAGGAGGAGCCCAAAAAAGAGGAAGGGAAGAAAGAAGAGGAAGGCAAGAAGGAGGAGCCAAAGAAAGAAGGAGATGACAAAAAAGACGAAGCAAAGAAAGACGAGTCGAAGAAGGACGATGACAAAAAAGATGAGCCAAAGAAGGAAGGTGAAAAGAAGGAAGAAGAGAAGAAGAAAGAGCAACCGCAAGTAGCTGTGCCAGTACCAATGCCAATGCCGATGCAGATGCCGATGCCGATGCCAATGCCGATGCACATGCAACAGCATGACCCAAGAATAATGGAGATGGTTAAGGCTTATAGAGCATATAACCCTCATTTGACCACTTATTATCATGTTCAAAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTAA ATGAAGTTAATATTGAAATTGGATTTACATGATGACAAAGCTAAGCAGAAGGCTTTGAAGACAGTTTCTGCACTTTCAGGGATTGATTTAATTGCAATGGACATGAAAGAGAGGAAGCTAACAGTAATTGGGACAGTGGATCCGGTGAATGTAGTAAGCAAATTGAGGAAATATTGGCCAACACATATAATTTCAGTAGGGCCAGCAGTAGAGCCCAAGAAGGAAGAACCAAAGAAGGAGGAGCCCAAAAAAGAGGAAGGGAAGAAAGAAGAGGAAGGCAAGAAGGAGGAGCCAAAGAAAGAAGGAGATGACAAAAAAGACGAAGCAAAGAAAGACGAGTCGAAGAAGGACGATGACAAAAAAGATGAGCCAAAGAAGGAAGGTGAAAAGAAGGAAGAAGAGAAGAAGAAAGAGCAACCGCAAGTAGCTGTGCCAGTACCAATGCCAATGCCGATGCAGATGCCGATGCCGATGCCAATGCCGATGCACATGCAACAGCATGACCCAAGAATAATGGAGATGGTTAAGGCTTATAGAGCATATAACCCTCATTTGACCACTTATTATCATGTTCAAAGCATGGAAGAGAACCCAAATGCTTGTGTTATTTGTTAA MKLILKLDLHDDKAKQKALKTVSALSGIDLIAMDMKERKLTVIGTVDPVNVVSKLRKYWPTHIISVGPAVEPKKEEPKKEEPKKEEGKKEEEGKKEEPKKEGDDKKDEAKKDESKKDDDKKDEPKKEGEKKEEEKKKEQPQVAVPVPMPMPMQMPMPMPMPMHMQQHDPRIMEMVKAYRAYNPHLTTYYHVQSMEENPNACVIC* Homology
BLAST of CsaV3_6G000880 vs. NCBI nr
Match: XP_011656358.1 (heavy metal-associated isoprenylated plant protein 39 isoform X2 [Cucumis sativus] >KAE8646553.1 hypothetical protein Csa_004780 [Cucumis sativus]) HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. NCBI nr
Match: XP_004138486.1 (heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucumis sativus]) HSP 1 Score: 360.9 bits (925), Expect = 7.2e-96 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. NCBI nr
Match: XP_008458168.1 (PREDICTED: FK506-binding protein 4-like [Cucumis melo]) HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86 Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. NCBI nr
Match: XP_038876319.1 (heavy metal-associated isoprenylated plant protein 39-like isoform X2 [Benincasa hispida]) HSP 1 Score: 317.8 bits (813), Expect = 7.0e-83 Identity = 184/204 (90.20%), Postives = 192/204 (94.12%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. NCBI nr
Match: XP_038876318.1 (heavy metal-associated isoprenylated plant protein 39-like isoform X1 [Benincasa hispida]) HSP 1 Score: 315.8 bits (808), Expect = 2.6e-82 Identity = 183/203 (90.15%), Postives = 191/203 (94.09%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.7e-45 Identity = 127/204 (62.25%), Postives = 149/204 (73.04%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.3e-11 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy TrEMBL
Match: A0A1S3C772 (FK506-binding protein 4-like OS=Cucumis melo OX=3656 GN=LOC103497688 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 5.0e-87 Identity = 191/203 (94.09%), Postives = 194/203 (95.57%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy TrEMBL
Match: A0A0A0K883 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006790 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 7.8e-80 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy TrEMBL
Match: A0A6J1L5J9 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111499316 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 6.2e-77 Identity = 175/207 (84.54%), Postives = 188/207 (90.82%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy TrEMBL
Match: A0A6J1H3W2 (heavy metal-associated isoprenylated plant protein 39-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460263 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 4.0e-76 Identity = 175/209 (83.73%), Postives = 187/209 (89.47%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. ExPASy TrEMBL
Match: A0A6J1H5A2 (heavy metal-associated isoprenylated plant protein 39-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460263 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 9.8e-75 Identity = 175/210 (83.33%), Postives = 187/210 (89.05%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.3 bits (464), Expect = 1.9e-46 Identity = 127/204 (62.25%), Postives = 149/204 (73.04%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 183.3 bits (464), Expect = 1.9e-46 Identity = 127/204 (62.25%), Postives = 149/204 (73.04%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family ) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15 Identity = 53/100 (53.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of CsaV3_6G000880 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family ) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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