CsaV3_5G039910 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATATAGTCGAAGAACATACAAAAACCATCCTGAGGAGACAGAAATGGAGAGAAATTTTACGGTATCCAAACGCCTTCTCTTCGATCGTCGCTACGGTTGGGTGTTAGTCTCTCTTTCCCTCTCTCGATTTCAGCTCCCGGTCTGTAAATTCTTAATTTGGATTTTGATGATTTTTACCTTTGGTTTCCAGGATTGATGAGTGGAAAGACCCTTCGGAAGAAGCTTTGGCCGGTGGCCGAGGAATGTATGTCTGTTTTTTTTTTTTTTTTTGCATGTATATTTCATCAGCTTTGGAAGTTATGCTTTCCGTTGTTTCCATTTTCATTTGGGTTGATGCTCTTTTTTCTGTGATTAGCATAGTTTCTAATTTTCGCTACCATTTCTGCTTTCTCTTATATTTGCTGGTTTTTCTAGTTTACTTGTTTATGAAGCAGAAAATTGAAACTCTAGATTGACCTCTTTATGTTATATCTTTGTTAGGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTATGGTTCTAACCTTATTCACTGTTGTTCTTGTTGCTGTTGTATTTTTTTTTTTTTTTTTGTTAAACAATTGAATTTAATCAAAATGTAAGAAGTAGAATTCCCATGTAGTAAAACGTGTTAAAGAAAACCCTTTGCAATGAATGTTTAGAAATTTGCAATTGTAAGTGAACTGTGGCTTGATTGAATTTGGGGTGTTTGGGTTAGACAGATCTTGGTGCATAGACTCTTCAATGTAAATAATTATTTGAGTGTTGTGTAAGTATTTAGTTCCGAGACAGTTGGGAAGTTCCAAAATCCATTGTTTAGTTAGTTACTCAAGTGGTTTATCTTGGTCTGGTTCCTCAGTTTTGATTCATTCCTTTCCTTCTTCCTTTTCCATTATTTTTTTGAAACCTTGGATGCGTATTTTGTTATATTTGTAAATAAGAAAATTTCCCATTAAGAAGAGTACAAGAATTCAATGGAGGTGACTCAATAAAGCAATGCCCTATTGTTAGGAATTAATTGCTAGGAGCCCACTTGTAAGGAATTAAGGAAAGAGGAAGATTACAAAAAATGATTAGATAGAGTGGATTCAAAATATCCTCCCATGATTGTTCTAATACTCAAAGGCCACGCCCAAAAGAACCTTCCTGTATGTTTCCACTTAGATTTCTCATACCATATGAGGAAACCCACTTGCCTGATAATCACCGCATGGCTGCGTATTGGTGACAGCAAAAAAAAAAAAAAAAATGTCTACGATCAATAGTACTAGGAAGTTGGAACAACTCGTATTAGTCAGCCCTTTCTATTTGGTAGAATCTTTCTTTTATCCTCATGTCTGCTTTGCCCGGGGAATAAATGAGGCATTGTGTGGATTAGATAGAGCCTTGGGTTTGATTCCTCTTCAATTCATACTTCAATTTGAGGAGAGAACCAAGACTGTGAACTGCTTCAGTTAGTTTCTAATTTCTTCTATTAGTCACATACAGGTGTCATCAGTTGGGGTGGTTCCAGATATTAAATAAGGGGACGACTGTTGGCTTTTGCTAATGTCTGGGGGTACTGATTCTTTTTAACCAGTTACAACTCATAATATGTAGCAAGATTTCTTCTTTGATATCTATAAGTTCAATCATTTATCGTTTTGGATTATTTTGAAACGATGCATAAACAAGGTTTAAGAGAGGGTTTGATGTTCTTGGGTGCACAAAAATGTTTAGTATTTTTATCCATAGTATGTATTATTAAGCTGCAATTCCTTGGGTATAAATCTGAGACCATTTATTACTCAAGTACTCGCGTAATTCTCGATTTGTTGTAGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAGCTGAATGAATATTGATCCTTACTCACTTGAAACTTGAAGAGATTAATTTGTACTTGAGAAAAGAAAAATGAAGATGATATCAACATGAAGGTGAAAGTATCTTTATAATCCCTACCATCTTCAATTTTTTCCTAAACTCTTCTTCAATGTTCTCACCAACCTTTTCAATCATTTTTTCTTTCTTTCTATCTAATTCTATTTATAAATTGGCTAAGAAACTTT ATGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAG ATGTTCTGCATAGTGCCTCTCGTCAAAAGTTTGGTTAACTCAGTCACACAGATGGTTAATATTGCAACAGTATCCACAGTTAAAGCTGTTGAAAATCCAGAGCTACTTTCACCTCAGGTACTACAAGCAGGTCTGCATCAAAGCCTTGAGAAATTCACTTCGTCCATCCAAAACTCACCATTTCACCTTGGCTTCCAGAAAGTTACTGCGCCTTCAGTTTCAACTTGTTCCTTGCATCTACAAGATGAAAAAATTGATCACAGTTAG MFCIVPLVKSLVNSVTQMVNIATVSTVKAVENPELLSPQVLQAGLHQSLEKFTSSIQNSPFHLGFQKVTAPSVSTCSLHLQDEKIDHS* Homology
BLAST of CsaV3_5G039910 vs. NCBI nr
Match: KAE8648997.1 (hypothetical protein Csa_008679 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 7.8e-39 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. NCBI nr
Match: XP_011656083.1 (uncharacterized protein LOC105435624 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 7.8e-39 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. NCBI nr
Match: XP_008459584.1 (PREDICTED: uncharacterized protein LOC103498670 [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. NCBI nr
Match: XP_038889418.1 (uncharacterized protein LOC120079329 isoform X2 [Benincasa hispida]) HSP 1 Score: 147.9 bits (372), Expect = 4.1e-32 Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. NCBI nr
Match: XP_038889417.1 (uncharacterized protein LOC120079329 isoform X1 [Benincasa hispida]) HSP 1 Score: 147.9 bits (372), Expect = 4.1e-32 Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. ExPASy TrEMBL
Match: A0A0A0KUT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649290 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 3.8e-39 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. ExPASy TrEMBL
Match: A0A1S3CAM7 (uncharacterized protein LOC103498670 OS=Cucumis melo OX=3656 GN=LOC103498670 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 9.6e-35 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. ExPASy TrEMBL
Match: A0A6J1EC20 (uncharacterized protein LOC111432700 OS=Cucurbita moschata OX=3662 GN=LOC111432700 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27 Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. ExPASy TrEMBL
Match: A0A6J1ID54 (uncharacterized protein LOC111472022 OS=Cucurbita maxima OX=3661 GN=LOC111472022 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25 Identity = 66/88 (75.00%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of CsaV3_5G039910 vs. ExPASy TrEMBL
Match: A0A5A7TDE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00830 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.1e-25 Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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