CsaV3_5G038050 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G038050
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Locationchr5: 30189127 .. 30191597 (+)
RNA-Seq ExpressionCsaV3_5G038050
SyntenyCsaV3_5G038050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCACTAATTTTTATAATTTAGAAAGAAAAAAAATCAACTTAAATTTGATTATAATTTAATTATGTTGAATTGAATAAAAGAAGGAAGAAGAAAGGGAGGAAAAATGAAATCCCCGGTTTTGTGTAGAGCGGCGGCCAAGGTTTAGCATTTCATTGCCCTAAATCGCTCCCTTCTTCCCTTTCTTTCCATTTACCCATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGTAATTCCCTCCCAACCCTTCGACTTCGACGATATTTTTTCAATGTAATTTGATTCTGGAAACTCAGCGTGTGAGTTCAGTTAAGATGCGTGGAAAAGTATGCTGAGTGTTCTCATAGGTATTGTTTTTCACTTTCTCTTTGAAGGCTTCCGATTGAACTGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGGTATTTTCAGTCCTTATTCTTATAGAGTGAATTTTACTTTTTCCTATCTTCTTTTTATCCTGCCACTACGAATTCTGATTTCTTTTGTTCAACATTGGATAGATGCATTCTTGGTCCTACAATCGAATTAGTAGTTTCTACAGTGAATTTTACCTTCTTTTTTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTATTCAATGTTCTTGTTCTGCTGACACTATGAAGTTTCTGATTTCTTTCGTTCAAGAATTTGGATAGCTCCATTCTTAATCTTACTACCGTGAGTTTTAACTTCTTCAATGTTCTTGTTAGCTGGCACTATGAAACTTTCTAATTTCTTTTGTTCATGATTGAATTTGAACTTTTTCAATGTTCTTGTTACTTACCGCGCTTCTATAATATAAATGCTCTTTTTGCTTGATTGAACAAGCATCTTATCCGTCCTTTTTTTTTTTTCGTTTTTTTCGTATCAATGGATTGCAATTTTGAGTTCATCTTCCTAAGATAAATATTAAATGCTGCATTCTGTACTAGGGTCTAACTTTTAAGCTAAAGAAGTAACGAAACCCTCCCCTCCAACTCTAACTTGTAATTTAGTTCTTTATAAGTGATGCTTGTATGTTCAAATCACGACTATTTCATCCACATAATTGATATAAACGCGAGGATACTAATTGTGATGTTTAATCAGTGTTCAATGATGATGTGTGATGACGAATGGTCAAGGGGCAGGAAGTTTTATGTGCAGAGTTCTACATTGTGACAGTGGCACTGCTAAATTTTGTGAACTGATCTGCAGGAATTTGGATTCCCAAGTCTTGACTTTCATTCTAGTTTGCATGTCTTAGATTCTGAATTTGTGTCACTATGGATTACTAGTAGAGTGTATAGGAAGAGATCTACAATCGACAAACATATGAGTTTTATCTGAATAGAAAGGTTTCAAGAAACTGAATTCACAAAGTCTTATTATGTTGAATTCCTTATAGGATTGTCTTGCAATAAAATGAAGGATTCTTTCTCCAGTTGTATGGTTGCTCTATCATTACTTAAGCTATGAACATACTTCATAGTTCTGATGGATGCTTGTGTTTTACAACTCCGAAATCTGTTAGATTGCTGAATGTATGAACTCAACAAGATTTATTAAATACAAAGATGTTTGGTGAACTCTAATCTTATTTTCTGTCTATGAACAGATCTGTGTTACACATCGTTAACGCTATTTAGTATCTATTTGGCAGTGTCTGGCTTGCAAACTTCAT

mRNA sequence

ATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAACTGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTGTTCAATGATGATGTGTGA

Coding sequence (CDS)

ATGGCTTCCTTTGCCGCCAGGTCCATTTTTCGATCCTCCTCCGCCAAGGCTGCCACTCTTCTCAGCGCCGGAGCCAGAGCTGCTCCGGCTTCTTCACCATTTCGCATTGCTTCCAAACGACCTTTCTCTCACTGCTCTTTTAGGCTTCCGATTGAACTGAGCTTCTGCGTCGAGTCCATGCTTCCCTTCCATTCTGCAACTTCTTCGGCATTAATGACTTCGATGCTTTCTGTTTCTCCCCATAGCTTTGGTTGGCTTTCAGAAGTGTTCAATGATGATGTGTGA

Protein sequence

MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESMLPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV*
Homology
[Close]
BLAST of CsaV3_5G038050 vs. NCBI nr
Match: XP_004148698.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucumis sativus] >KGN52462.1 hypothetical protein Csa_008896 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM
Sbjct: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 94

[Close]
BLAST of CsaV3_5G038050 vs. NCBI nr
Match: XP_004148697.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-37
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM
Sbjct: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEV 90
          LPFHSATSSALMTSMLSVSPHSFGWLSEV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEV 89

[Close]
BLAST of CsaV3_5G038050 vs. NCBI nr
Match: XP_008459322.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          LPFHSATSSALMTSMLSVSPHS+GWLSEVFNDDV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSEVFNDDV 94

[Close]
BLAST of CsaV3_5G038050 vs. NCBI nr
Match: XP_038887456.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFA R+IFRSSS KAATLLS GARAAPA SPFRIASKRPFS CS R+P+E+SFCVESM
Sbjct: 1  MASFAGRAIFRSSSGKAATLLSVGARAAPARSPFRIASKRPFSQCSVRIPVEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          LPFHSATSSALM SMLSVS H++GWLSEVFNDDV
Sbjct: 61 LPFHSATSSALMISMLSVSRHNYGWLSEVFNDDV 94

[Close]
BLAST of CsaV3_5G038050 vs. NCBI nr
Match: KAA0039497.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 3.1e-33
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSE 89
          LPFHSATSSALMTSMLSVSPHS+GWLSE
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0 

Query: 6   ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPF 65
           ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+
Sbjct: 10  ARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPY 69

Query: 66  HSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
           HSAT+SALMTS LS+S  ++GWLS+  NDDV
Sbjct: 70  HSATASALMTSKLSISGQTYGWLSDACNDDV 100

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match: A0A0A0KVK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636540 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.4e-41
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM
Sbjct: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 94

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match: A0A1S3C9E2 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.9e-37
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          LPFHSATSSALMTSMLSVSPHS+GWLSEVFNDDV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSEVFNDDV 94

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSE 89
          LPFHSATSSALMTSMLSVSPHS+GWLSE
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS KAATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKAATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSE 89
          LPFHSATSSALMTSMLSVSPHS+GWLSE
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSE 88

[Close]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match: A0A1S3CB40 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0 

Query: 1  MASFAARSIFRSSSAKAATLLSAGARAAPASSPFRIASKRPFSHCSFRLPIELSFCVESM 60
          MASFAAR+IFRSSS K ATLLSAGARAAPA SPFRIASKRPFSH SFR+PIE+SFCVESM
Sbjct: 1  MASFAARAIFRSSSGKTATLLSAGARAAPARSPFRIASKRPFSHSSFRIPIEMSFCVESM 60

Query: 61 LPFHSATSSALMTSMLSVSPHSFGWLSEV 90
          LPFHSATSSALMTSMLSVSPHS+GWLSEV
Sbjct: 61 LPFHSATSSALMTSMLSVSPHSYGWLSEV 89

[Close]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 77.0 bits (188), Expect = 8.9e-15
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0 

Query: 6   ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPF 65
           ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+
Sbjct: 10  ARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPY 69

Query: 66  HSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
           HSAT+SALMTS LS+S  ++GWLS+  NDDV
Sbjct: 70  HSATASALMTSKLSISGQTYGWLSDACNDDV 100

[Close]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0 

Query: 5  AARSIFRSSSAKAATL---LSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVES 64
          AARS+FRS++++A++     SAG +  P+S  + FR+  + P ++  FR P+ELS CVE+
Sbjct: 3  AARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVET 62

Query: 65 MLPFHSATSSALMTSMLSVSPHSFGWLSEVFNDDV 95
          MLP+H+AT+SAL+ SMLSVS    GW+ +  NDDV
Sbjct: 63 MLPYHTATASALLNSMLSVSRR--GWIVDDCNDDV 95

[Close]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 71.6 bits (174), Expect = 3.8e-13
Identity = 41/90 (45.56%), Postives = 61/90 (67.78%), Query Frame = 0 

Query: 6  ARSIFRSSSAKAATLLSAGARAAPASSP--FRIASKRPFSHCSFRLPIELSFCVESMLPF 65
          ARS+ R++S+++A   +    +   S+P  FR  ++R       R P+ELSFCVES+LP+
Sbjct: 10 ARSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPY 69

Query: 66 HSATSSALMTSMLSVSPHSFGWLSEVFNDD 94
          HSAT+SALMTS LS+S  ++GWLS+   +D
Sbjct: 70 HSATASALMTSKLSISGQTYGWLSDACKED 99

[Close]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match: AT2G33847.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.4); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-13
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0 

Query: 5  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLP 64
          AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+ELS CVE+MLP
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLP 62

Query: 65 FHSATSSALMTSMLSVSPHSFGWLSEVFND 93
          +H+AT+SAL+ SMLSVS  S     +  +D
Sbjct: 63 YHTATASALLNSMLSVSGRSIWTFQDCIDD 92

[Close]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match: AT2G33847.2 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28395.3); Has 71 Blast hits to 71 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0 

Query: 5  AARSIFRSSSAKAATLLSAGARAAPAS--SPFRIASKRPFSHCSFRLPIELSFCVESMLP 64
          AARS+FRS   +AA       +  P+S  S F++  + P SH  FR P+ELS CVE+MLP
Sbjct: 3  AARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLP 62

Query: 65 FHSATSSALMTSMLSVSPHS 83
          +H+AT+SAL+ SMLSVS  S
Sbjct: 63 YHTATASALLNSMLSVSGRS 82

The following BLAST results are available for this feature:
BLAST of CsaV3_5G038050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148698.11.5e-40100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2 [Cucu... [more]
XP_004148697.14.6e-37100.00protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu... [more]
XP_008459322.11.0e-3691.49PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ... [more]
XP_038887456.11.8e-3385.11protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa his... [more]
KAA0039497.13.1e-3392.05protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa][more]
BLAST of CsaV3_5G038050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ31.3e-1348.35Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of CsaV3_5G038050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVK47.4e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636540 PE=4 SV=1[more]
A0A1S3C9E24.9e-3791.49protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ... [more]
A0A5D3CTR81.5e-3392.05Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7TDD11.5e-3392.05Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A1S3CB401.5e-3391.01protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ... [more]
BLAST of CsaV3_5G038050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20585.18.9e-1548.35nuclear fusion defective 6 [more]
AT1G28395.42.6e-1448.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G20585.23.8e-1345.56nuclear fusion defective 6 [more]
AT2G33847.16.4e-1346.67unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
AT2G33847.22.4e-1251.25unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033251Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrialPANTHERPTHR33156:SF48PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..88
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 3..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G038050.1CsaV3_5G038050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000741 karyogamy