CsaV3_5G037780 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G037780
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionGlycosyltransferase
Locationchr5: 29913000 .. 29913463 (-)
RNA-Seq ExpressionCsaV3_5G037780
SyntenyCsaV3_5G037780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAGAGGAGAATATTTGGAGACGGGTGACATCCCCTCCCCTCCCCTCCCCTCCCCTGGGGTCGACATGTCTAAATACATGTGGAGATGGATCAATAAAACATATTTAAAAGAACTTTTTGAAAAAAATGATAGTTTTGTAAGGTGAAAATTTAGGAAGGCTAATTGAGTAACCTTTTAGAATGATTACGATTGTAAATTGATTTTAATAATTATGTCTCACCCTCCGTATCAAAGGGGCAAAGGATTTCCATTTGCATGTGGGAAAGAAAGAAAAAGAATTCCAAAATCCCCTGTGGATTCAGATTCCCAATATTTGCATCCTCATATTGCTATCTTCCCCTTCATGGCAAAAGGCCACACAATTCCTCTTCTTCACCTCCTCTGCCTCCTCCGCCGCCGTTTCCCTCACCTCTCTCTCACCATCTTCACCACCCCCGCTAACCGTCCCTTCACTTCAATT

mRNA sequence

ATGTCTCACCCTCCGTATCAAAGGGGCAAAGGATTTCCATTTGCATGTGGGAAAGAAAGAAAAAGAATTCCAAAATCCCCTGTGGATTCAGATTCCCAATATTTGCATCCTCATATTGCTATCTTCCCCTTCATGGCAAAAGGCCACACAATTCCTCTTCTTCACCTCCTCTGCCTCCTCCGCCGCCGTTTCCCTCACCTCTCTCTCACCATCTTCACCACCCCCGCTAACCGTCCCTTCACTTCAATT

Coding sequence (CDS)

ATGTCTCACCCTCCGTATCAAAGGGGCAAAGGATTTCCATTTGCATGTGGGAAAGAAAGAAAAAGAATTCCAAAATCCCCTGTGGATTCAGATTCCCAATATTTGCATCCTCATATTGCTATCTTCCCCTTCATGGCAAAAGGCCACACAATTCCTCTTCTTCACCTCCTCTGCCTCCTCCGCCGCCGTTTCCCTCACCTCTCTCTCACCATCTTCACCACCCCCGCTAACCGTCCCTTCACTTCAATT

Protein sequence

MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTSI
Homology
BLAST of CsaV3_5G037780 vs. NCBI nr
Match: KAE8648911.1 (hypothetical protein Csa_008442, partial [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL 60
          MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL
Sbjct: 1  MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL 60

Query: 61 RRRFPHLSLTIFTTPANRPFTSI 84
          RRRFPHLSLTIFTTPANRPFTSI
Sbjct: 61 RRRFPHLSLTIFTTPANRPFTSI 83

BLAST of CsaV3_5G037780 vs. NCBI nr
Match: XP_004151052.3 (UDP-glycosyltransferase 90A1 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 4.9e-19
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DSDSQ LHPHI IFPFMAKGHTIPLLHLL LLRRRFPHLSLTIFTTPANRPF S
Sbjct: 1  MDSDSQSLHPHIVIFPFMAKGHTIPLLHLLRLLRRRFPHLSLTIFTTPANRPFIS 55

BLAST of CsaV3_5G037780 vs. NCBI nr
Match: KAE8648910.1 (hypothetical protein Csa_009379 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 4.9e-19
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DSDSQ LHPHI IFPFMAKGHTIPLLHLL LLRRRFPHLSLTIFTTPANRPF S
Sbjct: 1  MDSDSQSLHPHIVIFPFMAKGHTIPLLHLLRLLRRRFPHLSLTIFTTPANRPFIS 55

BLAST of CsaV3_5G037780 vs. NCBI nr
Match: XP_008458697.1 (PREDICTED: UDP-glycosyltransferase 90A1-like [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DS SQ  H HI +FPFMAKGHTIPLLHL+ LLRRRFPHLSLTIFTTPANRPF S
Sbjct: 1  MDSVSQSSHHHIVVFPFMAKGHTIPLLHLISLLRRRFPHLSLTIFTTPANRPFIS 55

BLAST of CsaV3_5G037780 vs. NCBI nr
Match: KAA0039538.1 (UDP-glycosyltransferase 90A1-like [Cucumis melo var. makuwa] >TYK15291.1 UDP-glycosyltransferase 90A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 5.6e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DS SQ  H HI +FPFMAKGHTIPLLHL+ LLRRRFPHLSLTIFTTPANR F S
Sbjct: 1  MDSVSQSSHHHIVVFPFMAKGHTIPLLHLISLLRRRFPHLSLTIFTTPANRLFIS 55

BLAST of CsaV3_5G037780 vs. ExPASy Swiss-Prot
Match: Q9ZVX4 (UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana OX=3702 GN=UGT90A1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-07
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query: 36 HPHIAIFPFMAKGHTIPLL---HLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          H H+ +FPFM+KGH IPLL    LL    R+ P +++T+FTTP N+PF S
Sbjct: 7  HHHVVLFPFMSKGHIIPLLQFGRLLLRHHRKEPTITVTVFTTPKNQPFIS 56

BLAST of CsaV3_5G037780 vs. ExPASy Swiss-Prot
Match: Q9SY84 (UDP-glycosyltransferase 90A2 OS=Arabidopsis thaliana OX=3702 GN=UGT90A2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 9.3e-05
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0

Query: 38 HIAIFPFMAKGHTIPLLHLL-CLLRRRFP-HLSLTIFTTPANRPF 81
          H+ +FP+++KGH IP+L L   LL   F   +S+T+FTTP NRPF
Sbjct: 7  HVVLFPYLSKGHMIPMLQLARLLLSHSFAGDISVTVFTTPLNRPF 51

BLAST of CsaV3_5G037780 vs. ExPASy Swiss-Prot
Match: Q6WFW1 (Crocetin glucosyltransferase 3 OS=Crocus sativus OX=82528 GN=GLT3 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 7.9e-04
Identity = 19/40 (47.50%), Postives = 26/40 (65.00%), Query Frame = 0

Query: 38 HIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPAN 78
          HI +FPFM++GH IP L L  L+  R P  ++T+  TP N
Sbjct: 5  HIVLFPFMSQGHIIPFLSLAKLISERHPTYTITLLNTPLN 44

BLAST of CsaV3_5G037780 vs. ExPASy TrEMBL
Match: A0A0A0KS43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633820 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.9e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL 60
          MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL
Sbjct: 1  MSHPPYQRGKGFPFACGKERKRIPKSPVDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLL 60

Query: 61 RRRFPHLSLTIFTTPANRPFTSI 84
          RRRFPHLSLTIFTTPANRPFTSI
Sbjct: 61 RRRFPHLSLTIFTTPANRPFTSI 83

BLAST of CsaV3_5G037780 vs. ExPASy TrEMBL
Match: A0A0A0KS67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633800 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DSDSQ LHPHI IFPFMAKGHTIPLLHLL LLRRRFPHLSLTIFTTPANRPF S
Sbjct: 1  MDSDSQSLHPHIVIFPFMAKGHTIPLLHLLRLLRRRFPHLSLTIFTTPANRPFIS 55

BLAST of CsaV3_5G037780 vs. ExPASy TrEMBL
Match: A0A1S3C7Z9 (Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103498026 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-16
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DS SQ  H HI +FPFMAKGHTIPLLHL+ LLRRRFPHLSLTIFTTPANRPF S
Sbjct: 1  MDSVSQSSHHHIVVFPFMAKGHTIPLLHLISLLRRRFPHLSLTIFTTPANRPFIS 55

BLAST of CsaV3_5G037780 vs. ExPASy TrEMBL
Match: A0A5A7T9J2 (Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00720 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.7e-15
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 28 VDSDSQYLHPHIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          +DS SQ  H HI +FPFMAKGHTIPLLHL+ LLRRRFPHLSLTIFTTPANR F S
Sbjct: 1  MDSVSQSSHHHIVVFPFMAKGHTIPLLHLISLLRRRFPHLSLTIFTTPANRLFIS 55

BLAST of CsaV3_5G037780 vs. ExPASy TrEMBL
Match: A0A6J1FEF4 (Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111444766 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 38 HIAIFPFMAKGHTIPLLHLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          H+  FPFMAKGHT+PLLHL+ LLRRRFPHLS+T+FTT ANRPF S
Sbjct: 6  HVLFFPFMAKGHTLPLLHLIHLLRRRFPHLSVTLFTTAANRPFIS 50

BLAST of CsaV3_5G037780 vs. TAIR 10
Match: AT2G16890.1 (UDP-Glycosyltransferase superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query: 36 HPHIAIFPFMAKGHTIPLL---HLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          H H+ +FPFM+KGH IPLL    LL    R+ P +++T+FTTP N+PF S
Sbjct: 7  HHHVVLFPFMSKGHIIPLLQFGRLLLRHHRKEPTITVTVFTTPKNQPFIS 56

BLAST of CsaV3_5G037780 vs. TAIR 10
Match: AT2G16890.2 (UDP-Glycosyltransferase superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0

Query: 36 HPHIAIFPFMAKGHTIPLL---HLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          H H+ +FPFM+KGH IPLL    LL    R+ P +++T+FTTP N+PF S
Sbjct: 7  HHHVVLFPFMSKGHIIPLLQFGRLLLRHHRKEPTITVTVFTTPKNQPFIS 56

BLAST of CsaV3_5G037780 vs. TAIR 10
Match: AT5G14860.1 (UDP-Glycosyltransferase superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.8e-07
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 38 HIAIFPFMAKGHTIPLLHLLCLLRR---------RFPHLSLTIFTTPANRPFTS 83
          H  +FP+M+KGHTIPLL    LL R           P +S+T+FTTP N+PF S
Sbjct: 8  HAVLFPYMSKGHTIPLLQFARLLLRHRRIVSVDDEEPTISVTVFTTPKNQPFVS 61

BLAST of CsaV3_5G037780 vs. TAIR 10
Match: AT1G10400.1 (UDP-Glycosyltransferase superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.6e-06
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0

Query: 38 HIAIFPFMAKGHTIPLLHLL-CLLRRRFP-HLSLTIFTTPANRPF 81
          H+ +FP+++KGH IP+L L   LL   F   +S+T+FTTP NRPF
Sbjct: 7  HVVLFPYLSKGHMIPMLQLARLLLSHSFAGDISVTVFTTPLNRPF 51

BLAST of CsaV3_5G037780 vs. TAIR 10
Match: AT1G51210.1 (UDP-Glycosyltransferase superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 2.8e-04
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0

Query: 35 LHPHIAIFPFMAKGHTIPLL---HLLCLLRRRFPHLSLTIFTTPANRPFTS 83
          L PHI +FP+ A+GH +PLL   H LCL       L+++I  TP N P+ S
Sbjct: 17 LKPHIMVFPYPAQGHLLPLLDLTHQLCL-----RGLTVSIIVTPKNLPYLS 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8648911.12.0e-41100.00hypothetical protein Csa_008442, partial [Cucumis sativus][more]
XP_004151052.34.9e-1990.91UDP-glycosyltransferase 90A1 [Cucumis sativus][more]
KAE8648910.14.9e-1990.91hypothetical protein Csa_009379 [Cucumis sativus][more]
XP_008458697.13.9e-1681.82PREDICTED: UDP-glycosyltransferase 90A1-like [Cucumis melo][more]
KAA0039538.15.6e-1580.00UDP-glycosyltransferase 90A1-like [Cucumis melo var. makuwa] >TYK15291.1 UDP-gly... [more]
Match NameE-valueIdentityDescription
Q9ZVX45.8e-0752.00UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana OX=3702 GN=UGT90A1 PE=2 SV=... [more]
Q9SY849.3e-0551.11UDP-glycosyltransferase 90A2 OS=Arabidopsis thaliana OX=3702 GN=UGT90A2 PE=2 SV=... [more]
Q6WFW17.9e-0447.50Crocetin glucosyltransferase 3 OS=Crocus sativus OX=82528 GN=GLT3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KS439.9e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633820 PE=4 SV=1[more]
A0A0A0KS672.4e-1990.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633800 PE=4 SV=1[more]
A0A1S3C7Z91.9e-1681.82Glycosyltransferase OS=Cucumis melo OX=3656 GN=LOC103498026 PE=3 SV=1[more]
A0A5A7T9J22.7e-1580.00Glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G... [more]
A0A6J1FEF41.8e-1177.78Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111444766 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G16890.14.2e-0852.00UDP-Glycosyltransferase superfamily protein [more]
AT2G16890.24.2e-0852.00UDP-Glycosyltransferase superfamily protein [more]
AT5G14860.17.8e-0748.15UDP-Glycosyltransferase superfamily protein [more]
AT1G10400.16.6e-0651.11UDP-Glycosyltransferase superfamily protein [more]
AT1G51210.12.8e-0445.10UDP-Glycosyltransferase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 31..83
e-value: 5.4E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR48047:SF10GLYCOSYLTRANSFERASEcoord: 30..81
NoneNo IPR availablePANTHERPTHR48047GLYCOSYLTRANSFERASEcoord: 30..81
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 36..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G037780.1CsaV3_5G037780.1mRNA