CsaV3_5G030610 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G030610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Small heat shock protein
Location	chr5: 25114220 .. 25116088 (+)
RNA-Seq Expression	CsaV3_5G030610
Synteny	CsaV3_5G030610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTAAGAGATGTTAGGGTAATCTATTATCTATCTCTACTATATATATACACTCGTAGAAGTAGATTTTACTTTTTACATTTTCTTTTTGCCCTTCTCTTTTGTCTTTTTTAGTAAATGACTAATGTACAACTTTTCATTTGGTGTTAGGGTGATCATATGATGAAATCTCGAGCTAATTTTAGTGTTTTTTTACTGAAAATGAGTAAAAAAGTTAAGTTTACTCTACCGATGTCGAGGTTGAGTTTGAGAGAGATTGACACAAAAGGATATAAATTCGGATCATTCATACCTACTTTTCCGATGTGGATGCTCACCTTAGAACCATAAAAATACAACCTCGTGTGTAGAGATACACACAAATCATTAGATGCTTCTAGGAGATGTGTAGTTGATATATTCAATATAGAAAATAGAGGATAATTCTGTTGGATGGCTCAAATTTCTGGAGAGATCTAGAACGAAAGGAGGTTCCAGTTCTTTCCATCTCCAGACCCTCCTTCTCCATCCTTTAATAACTTCAACAATGGCGATTTTCTCATCACCTAAACGTTCCTTAACACAATCCTCATTCCTACTACTTCCTCCAACTCAATTCGAACTTCACATTTCTCTTTTAGTCCACAGATTCCTACATAATCCACAAAGTTCTGTTTGAATGGCTCAAGCTGTATCAAATCTGACTCGATTCGTCTGCTTCACTCCTACCAAAGCCTCCAATGATCCCAAGAAGTTTGTTCGTAAAAGTAGCGTCAAAGCCGTGAGAGGGGATGGCAGAGAGAATCTCGATCACTTACAGAGAACTATCGAAAAGGAAAAACAAACAGCTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGTAATTGATCTGACCTTGTTGCTGGTTTTAATTAATGGGCAGCTCTTCTTTTTGGTTTTGGTTTGATTTTGTTTTTTGTTTGTGTTCGTTTTTTCTAGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAAAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGAAGAGTTGAGATTAGATTTCGAGAGTAGGTGTAGTTATTTTTTTATCTGCTTTCAGTTTCAAAAGAACCTGATGTAAACAGTTATGAAGATGAAGTTCTTGCAATTTCATCCTGGCTTTTGTAATCTATTTTCAACAAAGCTTCGATGTAAACATTTGGCATTACTGATGGAATGATACCTTTAGTTACCTGTTAAACGCAACTGCTTTGAATTTTGTTTTAAGAGAATTGGTTCATCAGAATTTTGAAGAACCGTGGTTCCTTCTGTTATTGTCTGGATTGAATATTAGTAGCTGAAACGTTACTTCAGGAGTTATGTTCTTACTTTCTTGCTTTCAGAGAACCAAGCTCAACATGAAAGCCATGTAGTTTTAGAGAGATGAATCGGAATGCCAACCTTCAGGTGTGAGTTGTT

mRNA sequence

ATGGGCAGCTCTTCTTTTTGGTTTTGGTTTGATTTTGTTTTTTGTTTGTGTTCGTTTTTTCTAGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAAAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGA

Coding sequence (CDS)

ATGGGCAGCTCTTCTTTTTGGTTTTGGTTTGATTTTGTTTTTTGTTTGTGTTCGTTTTTTCTAGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAAAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGA

Protein sequence

MGSSSFWFWFDFVFCLCSFFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ*

Homology

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BLAST of CsaV3_5G030610 vs. NCBI nr
Match: KAE8648686.1 (hypothetical protein Csa_009263 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 8.1e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGSSSFWFWFDFVFCLCSFFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFT 60
           MGSSSFWFWFDFVFCLCSFFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFT
Sbjct: 1   MGSSSFWFWFDFVFCLCSFFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFT 60

Query: 61  SDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASE 120
           SDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASE
Sbjct: 61  SDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASE 120

Query: 121 ENGKVEEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDI 180
           ENGKVEEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDI
Sbjct: 121 ENGKVEEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDI 180

Query: 181 NVQ 184
           NVQ
Sbjct: 181 NVQ 183

[Close]

BLAST of CsaV3_5G030610 vs. NCBI nr
Match: XP_004135300.1 (small heat shock protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN
Sbjct: 70  IGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 129

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY
Sbjct: 130 EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 189

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ
Sbjct: 190 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 232

[Close]

BLAST of CsaV3_5G030610 vs. NCBI nr
Match: XP_038893285.1 (small heat shock protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 9.7e-84
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN
Sbjct: 71  VGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 130

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKAS ENGKVEEEEGDWSAKSYGRY
Sbjct: 131 EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASSENGKVEEEEGDWSAKSYGRY 190

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPEN+QFEQIKAEVKDGVLYITIPKA  TSKIVDINVQ
Sbjct: 191 SSRIALPENIQFEQIKAEVKDGVLYITIPKASVTSKIVDINVQ 233

[Close]

BLAST of CsaV3_5G030610 vs. NCBI nr
Match: XP_008446109.1 (PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo] >KAA0034232.1 small heat shock protein [Cucumis melo var. makuwa] >TYK15688.1 small heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 7.7e-81
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTS+GAGYSRGRTPWEIKEGEN
Sbjct: 71  IGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSEGAGYSRGRTPWEIKEGEN 130

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTK+DVKVWVEEKMLVV   KAEKVKKA EENGKVEEEEGDWSAKSYG+Y
Sbjct: 131 EYKMRFDMPGMTKNDVKVWVEEKMLVV---KAEKVKKAGEENGKVEEEEGDWSAKSYGKY 190

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ
Sbjct: 191 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 230

[Close]

BLAST of CsaV3_5G030610 vs. NCBI nr
Match: XP_022998578.1 (small heat shock protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 1.6e-78
Identity = 154/166 (92.77%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPF+SDGAGYSRGRTPWEIKEGEN
Sbjct: 73  VGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFSSDGAGYSRGRTPWEIKEGEN 132

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKV---EEEEGDWSAKSY 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVV   KAEKVKK S ENGKV   EEEEGDWSAKSY
Sbjct: 133 EYKMRFDMPGMTKDDVKVWVEEKMLVV---KAEKVKKTSSENGKVGEEEEEEGDWSAKSY 192

Query: 141 GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKA+ TSKIVDINVQ
Sbjct: 193 GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAVVTSKIVDINVQ 235

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BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot
Match: P31170 (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 68/162 (41.98%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           GL D     RT++QM++TM+R+ +D    SG          G+G S  R PW+IKE E+E
Sbjct: 84  GLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR------NRGGSGVSEIRAPWDIKEEEHE 143

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            KMRFDMPG++K+DVK+ VE+ +LV+K E+            K E+ +  WS +S   Y 
Sbjct: 144 IKMRFDMPGLSKEDVKISVEDNVLVIKGEQ------------KKEDSDDSWSGRSVSSYG 203

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           +R+ LP+N + ++IKAE+K+GVL+ITIPK     K++D+ +Q
Sbjct: 204 TRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot
Match: P09886 (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.1e-28
Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           GL D +   R+++QM++TM+RI +D     G            G    R PWEIK+ E+E
Sbjct: 91  GLLDPWSPMRSMRQMLDTMDRIFEDAITIPGR---------NIGGGEIRVPWEIKDEEHE 150

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            +MRFDMPG++K+DVKV VE+ +LV+K++         EENG     E  WS KSY  Y 
Sbjct: 151 IRMRFDMPGVSKEDVKVSVEDDVLVIKSDH-------REENG----GEDCWSRKSYSCYD 210

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           +R+ LP+N + E++KAE+KDGVLYITIPK      ++D+ +Q
Sbjct: 211 TRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 63/162 (38.89%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           G+ D +   R+++Q+++TM+R+ +D   + G            G    R PW+IK+ E+E
Sbjct: 38  GILDPWSPMRSMRQILDTMDRVFEDTMTFPGR---------NIGGGEIRAPWDIKDEEHE 97

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            +MRFDMPG+ K+DVKV VE+ MLV+K        K+ +E+G     +  WS+++Y  Y 
Sbjct: 98  IRMRFDMPGLAKEDVKVSVEDDMLVIKGG-----HKSEQEHG----GDDSWSSRTYSSYD 157

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           +R+ LP+N + +++KAE+K+GVLYITIPK     K++D+ VQ
Sbjct: 158 TRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           GL D     RT++QMM+TM+R+ +D   + G        S   G    R PW+IK+ ENE
Sbjct: 99  GLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG--------SRNRGTGEIRAPWDIKDDENE 158

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            KMRFDMPG++K++VKV VE+ +LV+K E  +      EE+GK    +  W  ++Y  Y 
Sbjct: 159 IKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKK------EESGK----DDSW-GRNYSSYD 218

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           +R++LP+NV  +++KAE+K+GVL I+IPK     K+ D+ ++
Sbjct: 219 TRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.6e-27
Identity = 65/161 (40.37%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           G+ D     RT++QM++TM+R+ +D   + G        +  +G    RTPW+I + ENE
Sbjct: 91  GVLDPMSPMRTMRQMIDTMDRLFEDTMTFPG-------RNRASGTGEIRTPWDIHDDENE 150

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            KMRFDMPG++K+DVKV VE  MLV+K E  +      EE+G+   ++  W  ++Y  Y 
Sbjct: 151 IKMRFDMPGLSKEDVKVSVENDMLVIKGEHKK------EEDGR---DKHSW-GRNYSSYD 210

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINV 183
           +R++LP+NV  ++IKAE+K+GVL+I+IPK     K++D+ +
Sbjct: 211 TRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL
Match: A0A0A0KTF5 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591720 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.0e-86
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN
Sbjct: 70  IGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 129

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY
Sbjct: 130 EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 189

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ
Sbjct: 190 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 232

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL
Match: A0A5A7ST00 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001860 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.7e-81
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTS+GAGYSRGRTPWEIKEGEN
Sbjct: 71  IGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSEGAGYSRGRTPWEIKEGEN 130

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTK+DVKVWVEEKMLVV   KAEKVKKA EENGKVEEEEGDWSAKSYG+Y
Sbjct: 131 EYKMRFDMPGMTKNDVKVWVEEKMLVV---KAEKVKKAGEENGKVEEEEGDWSAKSYGKY 190

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ
Sbjct: 191 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 230

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL
Match: A0A1S3BEA1 (small heat shock protein, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488933 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.7e-81
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTS+GAGYSRGRTPWEIKEGEN
Sbjct: 71  IGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSEGAGYSRGRTPWEIKEGEN 130

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRY 140
           EYKMRFDMPGMTK+DVKVWVEEKMLVV   KAEKVKKA EENGKVEEEEGDWSAKSYG+Y
Sbjct: 131 EYKMRFDMPGMTKNDVKVWVEEKMLVV---KAEKVKKAGEENGKVEEEEGDWSAKSYGKY 190

Query: 141 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ
Sbjct: 191 SSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 230

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL
Match: A0A6J1KH52 (small heat shock protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493168 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.7e-79
Identity = 154/166 (92.77%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPF+SDGAGYSRGRTPWEIKEGEN
Sbjct: 73  VGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFSSDGAGYSRGRTPWEIKEGEN 132

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKV---EEEEGDWSAKSY 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVV   KAEKVKK S ENGKV   EEEEGDWSAKSY
Sbjct: 133 EYKMRFDMPGMTKDDVKVWVEEKMLVV---KAEKVKKTSSENGKVGEEEEEEGDWSAKSY 192

Query: 141 GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKA+ TSKIVDINVQ
Sbjct: 193 GRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAVVTSKIVDINVQ 235

[Close]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL
Match: A0A6J1GWR4 (small heat shock protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458276 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.0e-78
Identity = 154/167 (92.22%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 21  LGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGEN 80
           +GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPF+SDGAGYSRGRTPWEIKEGEN
Sbjct: 73  VGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFSSDGAGYSRGRTPWEIKEGEN 132

Query: 81  EYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKV----EEEEGDWSAKS 140
           EYKMRFDMPGMTKDDVKVWVEEKMLVV   KAEKVKK S ENGKV    EEEEGDWSAKS
Sbjct: 133 EYKMRFDMPGMTKDDVKVWVEEKMLVV---KAEKVKKTSSENGKVGGEEEEEEGDWSAKS 192

Query: 141 YGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           YGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKA+ TSKIVDINVQ
Sbjct: 193 YGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAVVTSKIVDINVQ 236

[Close]

BLAST of CsaV3_5G030610 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 )

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 68/162 (41.98%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 22  GLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENE 81
           GL D     RT++QM++TM+R+ +D    SG          G+G S  R PW+IKE E+E
Sbjct: 84  GLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR------NRGGSGVSEIRAPWDIKEEEHE 143

Query: 82  YKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYS 141
            KMRFDMPG++K+DVK+ VE+ +LV+K E+            K E+ +  WS +S   Y 
Sbjct: 144 IKMRFDMPGLSKEDVKISVEDNVLVIKGEQ------------KKEDSDDSWSGRSVSSYG 203

Query: 142 SRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ 184
           +R+ LP+N + ++IKAE+K+GVL+ITIPK     K++D+ +Q
Sbjct: 204 TRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227

[Close]

BLAST of CsaV3_5G030610 vs. TAIR 10
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6 )

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-18
Identity = 52/153 (33.99%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 19  FFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEG 78
           FF  ++D F   R+V Q++  M++ M++P   +         + G G S  R  W+IKE 
Sbjct: 64  FFSDVFDPFSPTRSVSQVLNLMDQFMENPLLSA---------TRGMGASGARRGWDIKEK 123

Query: 79  ENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYG 138
           ++   +R DMPG++++DVK+ +E+  LV++ E            GK EE+ G+       
Sbjct: 124 DDALYLRIDMPGLSREDVKLALEQDTLVIRGE------------GKNEEDGGEEGESGNR 183

Query: 139 RYSSRIALPENV-QFEQIKAEVKDGVLYITIPK 171
           R++SRI LP+ + + ++IKAE+K+GVL + IPK
Sbjct: 184 RFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195

[Close]

BLAST of CsaV3_5G030610 vs. TAIR 10
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 32  TVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGM 91
           T+ Q  E M RI D+       +   PF   G          ++KE ++ YK+R+++PG+
Sbjct: 103 TLIQATENMNRIFDN-------FNVNPFQLMG----------QVKEQDDCYKLRYEVPGL 162

Query: 92  TKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYSSRIALPENVQ 151
           TK+DVK+ V + +L +K +      KA EE G  EE+E  WS+KSYG Y++ ++LP++ +
Sbjct: 163 TKEDVKITVNDGILTIKGD-----HKAEEEKGSPEEDE-YWSSKSYGYYNTSLSLPDDAK 222

Query: 152 FEQIKAEVKDGVLYITIPKAMATSK-IVDINVQ 184
            E IKAE+K+GVL + IP+     K + +I+V+
Sbjct: 223 VEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232

[Close]

BLAST of CsaV3_5G030610 vs. TAIR 10
Match: AT1G52560.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 32  TVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGM 91
           T+ Q  E M RI D+       +   PF   G          ++KE ++ YK+R+++PG+
Sbjct: 96  TLIQATENMNRIFDN-------FNVNPFQLMG----------QVKEQDDCYKLRYEVPGL 155

Query: 92  TKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYSSRIALPENVQ 151
           TK+DVK+ V + +L +K +      KA EE G  EE+E  WS+KSYG Y++ ++LP++ +
Sbjct: 156 TKEDVKITVNDGILTIKGD-----HKAEEEKGSPEEDE-YWSSKSYGYYNTSLSLPDDAK 215

Query: 152 FEQIKAEVKDGVLYITIPKAMATSK-IVDINVQ 184
            E IKAE+K+GVL + IP+     K + +I+V+
Sbjct: 216 VEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 225

[Close]

BLAST of CsaV3_5G030610 vs. TAIR 10
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 51/153 (33.33%), Postives = 85/153 (55.56%), Query Frame = 0


Query: 19  FFLGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEG 78
           FF  + D F   R++ QM+  M+++ + P   +         + G G S  R  W +KE 
Sbjct: 66  FFSHILDPFTPTRSLSQMLNFMDQVSEIPLVSA---------TRGMGASGVRRGWNVKEK 125

Query: 79  ENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYG 138
           ++   +R DMPG++++DVK+ +E+  LV++              G+ E EEG+  +    
Sbjct: 126 DDALHLRIDMPGLSREDVKLALEQNTLVIR--------------GEGETEEGEDVSGDGR 185

Query: 139 RYSSRIALPENV-QFEQIKAEVKDGVLYITIPK 171
           R++SRI LPE V + ++IKAE+K+GVL + IPK
Sbjct: 186 RFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPK 195

The following BLAST results are available for this feature:

BLAST of CsaV3_5G030610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648686.1	8.1e-99	100.00	hypothetical protein Csa_009263 [Cucumis sativus]	[more]
XP_004135300.1	1.0e-85	99.39	small heat shock protein, chloroplastic [Cucumis sativus]	[more]
XP_038893285.1	9.7e-84	96.93	small heat shock protein, chloroplastic-like [Benincasa hispida]	[more]
XP_008446109.1	7.7e-81	95.09	PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo] >KAA00342...	[more]
XP_022998578.1	1.6e-78	92.77	small heat shock protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CsaV3_5G030610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31170	2.2e-30	41.98	Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE...	[more]
P09886	2.1e-28	43.21	Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 S...	[more]
P09887	2.3e-27	38.89	Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP...	[more]
P30222	5.1e-27	40.74	Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2...	[more]
Q95661	8.6e-27	40.37	Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21...	[more]

BLAST of CsaV3_5G030610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTF5	5.0e-86	99.39	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591720 PE=3 S...	[more]
A0A5A7ST00	3.7e-81	95.09	Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BEA1	3.7e-81	95.09	small heat shock protein, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1KH52	7.7e-79	92.77	small heat shock protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GWR4	1.0e-78	92.22	small heat shock protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CsaV3_5G030610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27670.1	1.6e-31	41.98	heat shock protein 21	[more]
AT4G25200.1	5.8e-18	33.99	mitochondrion-localized small heat shock protein 23.6	[more]
AT1G52560.1	1.7e-17	36.60	HSP20-like chaperones superfamily protein	[more]
AT1G52560.2	1.7e-17	36.60	HSP20-like chaperones superfamily protein	[more]
AT5G51440.1	2.0e-15	33.33	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..129
None	No IPR available	PANTHER	PTHR46733:SF2	26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 20..183
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 74..170 e-value: 9.83066E-20 score: 77.2092
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 74..180 e-value: 1.6E-22 score: 79.6
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 64..183 score: 24.713577
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 28..182 e-value: 5.0E-30 score: 106.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 36..174
IPR044587	Heat shock protein 21-like	PANTHER	PTHR46733	26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 20..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G030610.1	CsaV3_5G030610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009408	response to heat