CsaV3_5G030280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G030280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	MYND-type domain-containing protein
Location	chr5: 24890174 .. 24892289 (+)
RNA-Seq Expression	CsaV3_5G030280
Synteny	CsaV3_5G030280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAGGATGGTTAAAGGGTAAGTTATACTTGAAAGGGGTGTGGTGGTGGTGGGAGTGTTATAGTTTGGTCTAACTATATAAAGCTTGGCATTTGCTTTTTGGGTTTTACCCTAAAGGAAGGAAGAGAGAAAAAAAACAAAGAAATTGGTGGATTTAATAAGAGGGAACAGCCACAAACAAAAGAGGCTGAAACAAGAATCATCATCTTCTTCATCATCCTCCTCCATGAGAACTCGAACAGGTCTATCTTATCCTCCACTTCAACCTACAGCCTTTGCTTCCGGCAACCGGAAAAGAAAACACCATGTTGCAGCCGACCGACCCTTTTGCCGCAAAAGAAACAAGCTCTCTTACCACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACGTAATTCCTTTTCCTTTTTTAATTTAGGGTTTTTTTTAGTGTGATGGGTTGGATTTTAATTTGTTTTTTTGTTTGTTTTTTGTTGGTTTCAGATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTCTATCAAGAGCTTCTCAGAAGACTTTCGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTCCTGAAACAGTGCTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGGTGAGTTTTTAATTTTATATATTCTTTTAATTTATGCGGATTTGTTTCGTTTTATTATTATTTTTTATTCTAATCCCATTTTGAAAGGTATAAACATTCCTTTTCCGTTTTCTGATTTTAATGATTTTAATAACTGATAAGCGATTCGCGCATTCATTTTTTTATTCAGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCGGCGATTTGTTCGCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGTAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTCGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGACGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAAAACATAACGGAAGGTCGTCGGTTTCTCGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTTTCCTCCGAGGCGGCTTCCTCCGTTGCCGCATCGCGCTCGTGCCTCACGTGGAACACTCAACCTCCTCACCACCGGCACGTCACCGGCTCGGGATGTCCCTTGTTAAGTGATTTCGGTTGCAATATTCCGGCACCGGAGGCTCATCCGGCAAGTCAGTTTTTAGCCGAATGGTTCGAGGCACGTGGGGGGTCGCCCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCAGAAACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTTGATTGGAAACTCCGCCATAAAATCGATTGTGCTCCGGTGGAACGTTGGCTTGATGATAACGGTGACGGTATGGACGATGTGGCCGATGATATCATGGACGAAAGTTAAAATGAGAAATTTTTAAAACGTTAGTTGACGGTGACGAGTGCTGTTTATAAACGTTGGCGGCTTCTCGTAATTTTAGTCGAAGAGACGTAAAAGTAAAGGGAGAGAATAAAAAAAGAAAGAAGAAAAGAAAAAAAAGAACGGCCAATTTTCCTTTTAAGATATTAAATTTATCTTATAACGATGGCAATGGAATCGGCGCGGCGGGGCTGTTAATGGCCTTTTTTGTGTACAGGGTGGCGGTGCGTTTTTATTTATTTTTTCAATGTGGAGAAACCGGTGGGTTAATTTTTGTACTATAGAGGAATCAGTATTTTACCACCAACTCCCTCTTGTTTTCGTTCATTTTAATTTTTAAATTAACCATTCCTATTTTTTATTTCTTTTATTTTAGCTTACTCTCTTTCCTTTTGATCAGATCACATCAATAATTACCTCTATTTAACGTATCTATTTATTTTTTATTTTTCTCTTTTTTTTTT

mRNA sequence

ATGAGAACTCGAACAGGTCTATCTTATCCTCCACTTCAACCTACAGCCTTTGCTTCCGGCAACCGGAAAAGAAAACACCATGTTGCAGCCGACCGACCCTTTTGCCGCAAAAGAAACAAGCTCTCTTACCACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTCTATCAAGAGCTTCTCAGAAGACTTTCGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTCCTGAAACAGTGCTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCGGCGATTTGTTCGCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGTAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTCGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGACGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAAAACATAACGGAAGGTCGTCGGTTTCTCGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTTTCCTCCGAGGCGGCTTCCTCCGTTGCCGCATCGCGCTCGTGCCTCACGTGGAACACTCAACCTCCTCACCACCGGCACGTCACCGGCTCGGGATGTCCCTTGTTAAGTGATTTCGGTTGCAATATTCCGGCACCGGAGGCTCATCCGGCAAGTCAGTTTTTAGCCGAATGGTTCGAGGCACGTGGGGGGTCGCCCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCAGAAACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTTGATTGGAAACTCCGCCATAAAATCGATTGTGCTCCGGTGGAACGTTGGCTTGATGATAACGGTGACGGTATGGACGATGTGGCCGATGATATCATGGACGAAAGTTAA

Coding sequence (CDS)

ATGAGAACTCGAACAGGTCTATCTTATCCTCCACTTCAACCTACAGCCTTTGCTTCCGGCAACCGGAAAAGAAAACACCATGTTGCAGCCGACCGACCCTTTTGCCGCAAAAGAAACAAGCTCTCTTACCACATCAAAACACCCACCTCCGATTTGTTCGATTCTTTGCCGGACGACCTCGTCATTACTATTCTCTCTAATCTCAGCTCCGCCGCTTCTTCCCCCTCCGATTTCATCAATATCTTACTAACATGCAAGAGATTAAACAATTTAGGACTTAATCCCATGGTTCTATCAAGAGCTTCTCAGAAGACTTTCGCAATTAGGGCAAAGAATTGGACGGAATCCGCTCACCGGTTCCTGAAACAGTGCTCAGATGCCGGAAATGTCGAGGCCTGTTATACACTTGGCATGATTCGTTTCTACTGTTTGCAAAATCGTGGTAGCGGAGCTTCGTTAATGGCGAAGGCGGCGATTTGTTCGCACGCGCCGGCTCTTTACTCACTCGCCGTCATTCAGTTCAATGGTAGCGGCGGATCCAAGAACGACAAGGACCTCCGCGCCGGAGTCGCACTTTGCGCACGTGCAGCGTTTCTCGGCCACATCGACGCCCTTAGAGAGCTTGGCCATTGCCTTCAAGACGGTTACGGAGTTCGCCAAAACATAACGGAAGGTCGTCGGTTTCTCGTTCAGGCCAACGCGCGTGAACTCGCCGCCGTGCTTTCCTCCGAGGCGGCTTCCTCCGTTGCCGCATCGCGCTCGTGCCTCACGTGGAACACTCAACCTCCTCACCACCGGCACGTCACCGGCTCGGGATGTCCCTTGTTAAGTGATTTCGGTTGCAATATTCCGGCACCGGAGGCTCATCCGGCAAGTCAGTTTTTAGCCGAATGGTTCGAGGCACGTGGGGGGTCGCCCGGGAATGGGCTGAGGCTATGTTCGCACGTGGGGTGTGGACGTCCAGAAACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCGCTTGATTGGAAACTCCGCCATAAAATCGATTGTGCTCCGGTGGAACGTTGGCTTGATGATAACGGTGACGGTATGGACGATGTGGCCGATGATATCATGGACGAAAGTTAA

Protein sequence

MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPVERWLDDNGDGMDDVADDIMDES*

Homology

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BLAST of CsaV3_5G030280 vs. NCBI nr
Match: XP_004135325.1 (F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_008598 [Cucumis sativus])

HSP 1 Score: 785.0 bits (2026), Expect = 2.9e-223
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGDGMDDVADDIMDES
Sbjct: 361 ERWLDDNGDGMDDVADDIMDES 382

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BLAST of CsaV3_5G030280 vs. NCBI nr
Match: KAA0034193.1 (F-box protein [Cucumis melo var. makuwa] >TYK15727.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 753.8 bits (1945), Expect = 7.1e-214
Identity = 369/382 (96.60%), Postives = 372/382 (97.38%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKRK HVAADRPFCRKRNK S  IKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNL SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

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BLAST of CsaV3_5G030280 vs. NCBI nr
Match: XP_008446037.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 752.3 bits (1941), Expect = 2.1e-213
Identity = 368/382 (96.34%), Postives = 371/382 (97.12%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKRK HVAADRPFCRKRNK S  IKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSN  SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNFCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

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BLAST of CsaV3_5G030280 vs. NCBI nr
Match: XP_038893304.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 720.3 bits (1858), Expect = 8.7e-204
Identity = 353/384 (91.93%), Postives = 365/384 (95.05%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGN--RKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPD 60
           MRTRTGLSYP LQP   +S N  RKR H+VAADRPFCRKRNKLS   K PT+DLFDSLPD
Sbjct: 1   MRTRTGLSYPQLQPNTLSSDNHHRKRTHYVAADRPFCRKRNKLSSDTKIPTADLFDSLPD 60

Query: 61  DLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAH 120
           DL+I+ILSNLSSAASSPSDFINILLTCKRLN+LGLNPMVLSRASQKTFAIRA+NWTESAH
Sbjct: 61  DLIISILSNLSSAASSPSDFINILLTCKRLNSLGLNPMVLSRASQKTFAIRARNWTESAH 120

Query: 121 RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180
           RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG
Sbjct: 121 RFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSG 180

Query: 181 GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240
           GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA
Sbjct: 181 GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELA 240

Query: 241 AVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEW 300
           AVLSSEAASSVAASRSCLTW+  PPHHRH+TGSGCPLLSDFGCNIPAPE HPASQFLAEW
Sbjct: 241 AVLSSEAASSVAASRSCLTWSIHPPHHRHITGSGCPLLSDFGCNIPAPEVHPASQFLAEW 300

Query: 301 FEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCA 360
           FEARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCA
Sbjct: 301 FEARGGSPGHGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCA 360

Query: 361 PVERWLDDNGDGMDDVADDIMDES 383
           PVERWLD+NGDG  D AD IMDES
Sbjct: 361 PVERWLDENGDGGADGADVIMDES 384

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BLAST of CsaV3_5G030280 vs. NCBI nr
Match: XP_022957417.1 (F-box protein At1g67340 [Cucurbita moschata])

HSP 1 Score: 672.5 bits (1734), Expect = 2.1e-189
Identity = 338/385 (87.79%), Postives = 349/385 (90.65%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGN-RKRKHHVA--ADRPFCRKRNKLSYHIKTPTSDLFDSLP 60
           MRTR GL YP LQP  F+    RKR H  A  ADR FCRKRNK S  IKTPTSDLFDSLP
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPTSDLFDSLP 60

Query: 61  DDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESA 120
           DDLVI+ILS LSSAASSPS+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTESA
Sbjct: 61  DDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTESA 120

Query: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGS 180
           HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGS 180

Query: 181 GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240
           GGSKNDK+L AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL
Sbjct: 181 GGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240

Query: 241 AAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAE 300
           AAVLSSEA SSVAASR+CLTWN   PHHRHVTGS CPLLSDFGCNIPAPE HPASQFLAE
Sbjct: 241 AAVLSSEAGSSVAASRTCLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAE 300

Query: 301 WFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDC 360
           WF ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGMDDVADDIMDES 383
            PVERWLDDNGDG  D  DD+MDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 384

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BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 1.2e-139
Identity = 244/336 (72.62%), Postives = 279/336 (83.04%), Query Frame = 0


Query: 47  TPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTF 106
           T  +DL DS+PDDLVI+IL  L S +  P+DFIN+LLTCKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 107 AIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPAL 166
           A++A NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 167 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 226
           YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 227 RFLVQANARELAAVLSSEAASSVAASRSCLTWNTQP----PHHRHVTGSGCPLLSDFGCN 286
           RFLVQANARELAAVLS    S + A  + L+ +  P    P+H   T   CPLLSDFGCN
Sbjct: 218 RFLVQANARELAAVLS----SGIQARSTWLSLSQPPPPVVPNHGQQT---CPLLSDFGCN 277

Query: 287 IPAPEAHPASQFLAEWFEARGGS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCS 346
           +PAPE HPA++FLA+WF  RGG  PG+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCS
Sbjct: 278 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 337

Query: 347 RACQALDWKLRHKIDCAPVERWLDDNGDGMDDVADD 378
           RACQALDWKLRHK+DCAPV+RWL++   G  +V  D
Sbjct: 338 RACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-107
Identity = 198/347 (57.06%), Postives = 253/347 (72.91%), Query Frame = 0


Query: 37  KRNKLSYHIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPM 96
           K+ +L  +     ++ F+ L DDL+I+IL  L+++ASSPSDF+ +L TCKRLN LGL+P+
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 97  VLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAK 156
           VLS+A  +T A+ A+ W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 157 AAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 216
           AAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 217 GVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLL 276
           GV ++++EGRR L+QANARELA  L           RS L+           +G     L
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSL-----------RSYLSLK---------SGDENETL 245

Query: 277 SDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGA 336
           +D    +P  E HP ++FL EWF +       GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 TDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 337 VNYCSRACQALDWKLRHKIDCAPVERWL---DDNGDGMDDVADDIMD 381
           VNYCSR CQALDW+ +HK++C P++ W+    + GD  + VA +I D
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04
Identity = 31/104 (29.81%), Postives = 45/104 (43.27%), Query Frame = 0


Query: 274 PLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSV 333
           P  +DF    P  E  P+    + +   + G+      LC   GC  P       +RCS 
Sbjct: 101 PRQNDFYSYEPPSEDPPSETGESVYLHLKSGA-----HLCRVCGCSGP-------KRCSR 160

Query: 334 CGAVNYCSRACQALDWKLRHKIDCAPVERWLDDNGDGMDDVADD 378
           C   +YCS+  Q+LDW+L HK  CA          D +D++  D
Sbjct: 161 CHKAHYCSKEHQSLDWRLGHKQACAQT--------DNLDNIVPD 184

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04
Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 296 AEWFEARGGSPG-----------NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRAC 355
           A++FE  GGS G           +    CS   CG+  T     ++CS C +V YCS AC
Sbjct: 36  AKYFEVGGGSGGFDRDHRRDFMVSDTAECS--VCGKATT-----KKCSRCKSVRYCSAAC 95

Query: 356 QALDWKLRHKIDC 358
           Q  DWK  HK+ C
Sbjct: 96  QTSDWKSGHKLKC 101

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.6e-04
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKIDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL
Match: A0A0A0KTC5 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 1.4e-223
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGDGMDDVADDIMDES
Sbjct: 361 ERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL
Match: A0A5A7SUQ1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 3.4e-214
Identity = 369/382 (96.60%), Postives = 372/382 (97.38%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKRK HVAADRPFCRKRNK S  IKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSNL SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNLCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL
Match: A0A1S3BE37 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.0e-213
Identity = 368/382 (96.34%), Postives = 371/382 (97.12%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGNRKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDDL 60
           MRTRTGLSYPPLQPT F+SGNRKRK HVAADRPFCRKRNK S  IKTP SDLFDSLPDDL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLHVAADRPFCRKRNKHSSDIKTPISDLFDSLPDDL 60

Query: 61  VITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120
           VITILSN  SAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF
Sbjct: 61  VITILSNFCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHRF 120

Query: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180
           LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS
Sbjct: 121 LKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGGS 180

Query: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240
           KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV
Sbjct: 181 KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAV 240

Query: 241 LSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300
           LSSEAASSVAASRSCLTWNT PPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE
Sbjct: 241 LSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWFE 300

Query: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAPV 360
           ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPV
Sbjct: 301 ARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPV 360

Query: 361 ERWLDDNGDGMDDVADDIMDES 383
           ERWLDDNGD  DDVADDIM+ES
Sbjct: 361 ERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL
Match: A0A6J1GZ25 (F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.0e-189
Identity = 338/385 (87.79%), Postives = 349/385 (90.65%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGN-RKRKHHVA--ADRPFCRKRNKLSYHIKTPTSDLFDSLP 60
           MRTR GL YP LQP  F+    RKR H  A  ADR FCRKRNK S  IKTPTSDLFDSLP
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADADRQFCRKRNKPSPDIKTPTSDLFDSLP 60

Query: 61  DDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESA 120
           DDLVI+ILS LSSAASSPS+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTESA
Sbjct: 61  DDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTESA 120

Query: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGS 180
           HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGS
Sbjct: 121 HRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGS 180

Query: 181 GGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240
           GGSKNDK+L AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL
Sbjct: 181 GGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANAREL 240

Query: 241 AAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAE 300
           AAVLSSEA SSVAASR+CLTWN   PHHRHVTGS CPLLSDFGCNIPAPE HPASQFLAE
Sbjct: 241 AAVLSSEAGSSVAASRTCLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAE 300

Query: 301 WFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDC 360
           WF ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 APVERWLDDNGDGMDDVADDIMDES 383
            PVERWLDDNGDG  D  DD+MDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL
Match: A0A6J1KDE5 (F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 2.1e-187
Identity = 332/383 (86.68%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MRTRTGLSYPPLQPTAFASGN-RKRKHHVAADRPFCRKRNKLSYHIKTPTSDLFDSLPDD 60
           MRTR GL YP L    F+    RKR H  +ADR FCRKRNKLS  IKTPTSDLFDSLPDD
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHDASADRHFCRKRNKLSPDIKTPTSDLFDSLPDD 60

Query: 61  LVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTESAHR 120
           LVI+ILS L +AASS S+FINILLTCKRLN+LGLNP+VLSRAS K FAI A+NWTESAHR
Sbjct: 61  LVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTESAHR 120

Query: 121 FLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180
           FLKQC+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG
Sbjct: 121 FLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNGSGG 180

Query: 181 SKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240
           SKNDK LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA
Sbjct: 181 SKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAA 240

Query: 241 VLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLAEWF 300
           VLSSEA SSV ASR+ LTWN   PHHRHVTGS CPLLSDFGCNIPAPEAHPASQFLAEWF
Sbjct: 241 VLSSEAGSSVTASRTFLTWNPH-PHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAEWF 300

Query: 301 EARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKIDCAP 360
            ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DC P
Sbjct: 301 AARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVP 360

Query: 361 VERWLDDNGDGMDDVADDIMDES 383
           VERWLDDNGDG  D   D+MDES
Sbjct: 361 VERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of CsaV3_5G030280 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 497.7 bits (1280), Expect = 8.6e-141
Identity = 244/336 (72.62%), Postives = 279/336 (83.04%), Query Frame = 0


Query: 47  TPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTF 106
           T  +DL DS+PDDLVI+IL  L S +  P+DFIN+LLTCKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 107 AIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPAL 166
           A++A NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 167 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 226
           YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 227 RFLVQANARELAAVLSSEAASSVAASRSCLTWNTQP----PHHRHVTGSGCPLLSDFGCN 286
           RFLVQANARELAAVLS    S + A  + L+ +  P    P+H   T   CPLLSDFGCN
Sbjct: 218 RFLVQANARELAAVLS----SGIQARSTWLSLSQPPPPVVPNHGQQT---CPLLSDFGCN 277

Query: 287 IPAPEAHPASQFLAEWFEARGGS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCS 346
           +PAPE HPA++FLA+WF  RGG  PG+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCS
Sbjct: 278 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 337

Query: 347 RACQALDWKLRHKIDCAPVERWLDDNGDGMDDVADD 378
           RACQALDWKLRHK+DCAPV+RWL++   G  +V  D
Sbjct: 338 RACQALDWKLRHKMDCAPVQRWLEEGDGGEGNVQID 366

[Close]

BLAST of CsaV3_5G030280 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 391.3 bits (1004), Expect = 8.6e-109
Identity = 198/347 (57.06%), Postives = 253/347 (72.91%), Query Frame = 0


Query: 37  KRNKLSYHIKTPTSDLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPM 96
           K+ +L  +     ++ F+ L DDL+I+IL  L+++ASSPSDF+ +L TCKRLN LGL+P+
Sbjct: 6   KKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPL 65

Query: 97  VLSRASQKTFAIRAKNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAK 156
           VLS+A  +T A+ A+ W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAK
Sbjct: 66  VLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAK 125

Query: 157 AAICSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 216
           AAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGY
Sbjct: 126 AAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGY 185

Query: 217 GVRQNITEGRRFLVQANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLL 276
           GV ++++EGRR L+QANARELA  L           RS L+           +G     L
Sbjct: 186 GVPRDVSEGRRLLIQANARELACSL-----------RSYLSLK---------SGDENETL 245

Query: 277 SDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGA 336
           +D    +P  E HP ++FL EWF +       GLR+CSH GCGRPETR HEFRRCSVCG 
Sbjct: 246 TDLSV-VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGK 305

Query: 337 VNYCSRACQALDWKLRHKIDCAPVERWL---DDNGDGMDDVADDIMD 381
           VNYCSR CQALDW+ +HK++C P++ W+    + GD  + VA +I D
Sbjct: 306 VNYCSRGCQALDWRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of CsaV3_5G030280 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 296 AEWFEARGGSPG-----------NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRAC 355
           A++FE  GGS G           +    CS   CG+  T     ++CS C +V YCS AC
Sbjct: 36  AKYFEVGGGSGGFDRDHRRDFMVSDTAECS--VCGKATT-----KKCSRCKSVRYCSAAC 95

Query: 356 QALDWKLRHKIDC 358
           Q  DWK  HK+ C
Sbjct: 96  QTSDWKSGHKLKC 101

[Close]

BLAST of CsaV3_5G030280 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKIDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of CsaV3_5G030280 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-05
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 330 RCSVCGAVNYCSRACQALDWKLRHKIDCAPVE 362
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of CsaV3_5G030280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135325.1	2.9e-223	100.00	F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_0...	[more]
KAA0034193.1	7.1e-214	96.60	F-box protein [Cucumis melo var. makuwa] >TYK15727.1 F-box protein [Cucumis melo...	[more]
XP_008446037.1	2.1e-213	96.34	PREDICTED: F-box protein At1g67340 [Cucumis melo]	[more]
XP_038893304.1	8.7e-204	91.93	F-box protein At1g67340 [Benincasa hispida]	[more]
XP_022957417.1	2.1e-189	87.79	F-box protein At1g67340 [Cucurbita moschata]	[more]

BLAST of CsaV3_5G030280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	1.2e-139	72.62	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.2e-107	57.06	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	1.9e-04	29.81	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q9SJA1	2.5e-04	38.36	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
Q9FPS9	5.6e-04	53.13	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of CsaV3_5G030280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTC5	1.4e-223	100.00	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 P...	[more]
A0A5A7SUQ1	3.4e-214	96.60	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 ...	[more]
A0A1S3BE37	1.0e-213	96.34	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1	[more]
A0A6J1GZ25	1.0e-189	87.79	F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1	[more]
A0A6J1KDE5	2.1e-187	86.68	F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1	[more]

BLAST of CsaV3_5G030280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	8.6e-141	72.62	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	8.6e-109	57.06	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	1.8e-05	38.36	ubiquitin-specific protease 19	[more]
AT1G17110.1	4.0e-05	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	4.0e-05	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 318..357 e-value: 6.1E-8 score: 32.6
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 315..357 score: 10.7471
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 92..253 e-value: 2.8E-18 score: 68.7
None	No IPR available	GENE3D	6.10.140.2220		coord: 305..361 e-value: 1.8E-10 score: 42.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 1..375
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 111..232
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 312..362
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..375
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 47..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G030280.1	CsaV3_5G030280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding