CsaV3_5G030270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G030270
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Locationchr5: 24869407 .. 24871125 (-)
RNA-Seq ExpressionCsaV3_5G030270
SyntenyCsaV3_5G030270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACAACCACAAGTTGAGATTATTCCAGGTAAGCATGATGAGGTGGCAGATATCAGATTCTCTTATCCACGTGGCAATGAATATTACCAATTACAAATTCCCTCTCCTATCCATTAAGATAAGGCCATGCATACATTAACAAACTCCGAATTTTCCATTCAAACAATCCTCCACACAACCATCCAGCCATCTCCGTCACTCCCCAATTTTTCCTTTAGAAAACACCACTAATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCTGCCGTGGCAATTTCTTCCTCAAGGCAAACTTTTTTATTTCTCACTTCTTCCTTCTTTAATTTAGTTTCATTTTCCCCATCCAATTTTATTAATTGCTTATGAATTTTTTCCCCCCTTTTGCAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAATTTCCTTACTGGCAAGAAGCTTAGGCTCAGAAACTTAAATGCTGCTGCTACTGCTGTCGTTGCTCCTCGAACGGTTCCGGTATGCGCAGCAGCCGATCCGGATAGACCTCTTTGGTTCCCTGGCAGCACTCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGGTTAGTATTAAACTACTAGCTAGCTGTATATACTGGACTCAAAGAGATTAATAAGGATTAGTTTGTTTATGTTCTTAGAATGATTAATTAATGTTGAGGTTTGTATAGAGAAGAGATAGAGTTATAGAGAAATTCTGGGGGGGGTAATTGTGAAGATAAAAATTCTTACGGGGTTTATTCTGTGTAGCGTCTGATCCGGAGAGTCTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCTGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACACTGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATCGGTTGGGCTGAGGGTAGACGGTGGGCCGATATCCTCAAACCCGGATGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTGACCGGAACCGACGTTGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGATAACCTTTTTGCTCACCTTGCTGATCCTGGCCACGCCACCGTCTTCGCCGTGAGTTTTCTTCTTCTTTTACAATAACTTTTCTAAACATAATGTATTTTTTAAAATAAAGTTTTGAGTTTTGATTTTAATTTGAAAACTTTGATTGATGGGTTGATTTTTGTTTTGGCAGGCATTCACACCAAAGTGAAGAAATTGAGGAGCAAATAGGAGAGATGTAGTGATGTTTGTTGTGGGTTGAGGGACAAATTTATGTATTGAATCACAACTTTGATCTAATCTCTGTGTTTATGTGTATGATGGACCATATCATTATCAATTTAATGTACAAAATGAGATCAACAAATTAAGCAAATTTAGGCCCACTTATTGACTTCTATCAACCAATTTTAACAATATTTAATCCTAAATTGTTCTAATAATTGAATTTTATATTCTAATTCAGTTATATAAAT

mRNA sequence

ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCTGCCGTGGCAATTTCTTCCTCAAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAATTTCCTTACTGGCAAGAAGCTTAGGCTCAGAAACTTAAATGCTGCTGCTACTGCTGTCGTTGCTCCTCGAACGGTTCCGGTATGCGCAGCAGCCGATCCGGATAGACCTCTTTGGTTCCCTGGCAGCACTCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCTGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACACTGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATCGGTTGGGCTGAGGGTAGACGGTGGGCCGATATCCTCAAACCCGGATGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTGACCGGAACCGACGTTGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGATAACCTTTTTGCTCACCTTGCTGATCCTGGCCACGCCACCGTCTTCGCCGCATTCACACCAAAGTGA

Coding sequence (CDS)

ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCTGCCGTGGCAATTTCTTCCTCAAGTTCATCGAAGAATGGCTGCCCCAAGCTGGCTTCTAATTTCCTTACTGGCAAGAAGCTTAGGCTCAGAAACTTAAATGCTGCTGCTACTGCTGTCGTTGCTCCTCGAACGGTTCCGGTATGCGCAGCAGCCGATCCGGATAGACCTCTTTGGTTCCCTGGCAGCACTCCTCCTCCGTGGCTCGATGGCAGCCTTCCCGGTGACTTTGGCTTTGACCCTCTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAACAGGCGGAGCTCGTACACTGCCGATGGGCAATGTTGGGGGCAGCTGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGTATATTGAACACTCCTTCGTGGTACACTGCCGGTGAATTGGAATATTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATCGGTTGGGCTGAGGGTAGACGGTGGGCCGATATCCTCAAACCCGGATGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTGACCGGAACCGACGTTGGGTACCCTGGTGGGCTCTGGTTTGACCCACTCGGATGGGGCAGCGGATCACCGGAAAAGATTAAGGAATTGAGAACGAAAGAGATTAAGAACGGACGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGATAACCTTTTTGCTCACCTTGCTGATCCTGGCCACGCCACCGTCTTCGCCGCATTCACACCAAAGTGA

Protein sequence

MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK*
Homology
[Close]
BLAST of CsaV3_5G030270 vs. NCBI nr
Match: XP_004135326.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucumis sativus] >KGN51671.1 hypothetical protein Csa_008664 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 3.3e-157
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271

[Close]
BLAST of CsaV3_5G030270 vs. NCBI nr
Match: XP_008446036.1 (PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 265/271 (97.79%), Postives = 267/271 (98.52%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 269

[Close]
BLAST of CsaV3_5G030270 vs. NCBI nr
Match: XP_038892923.1 (chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida])

HSP 1 Score: 537.7 bits (1384), Expect = 5.7e-149
Identity = 260/270 (96.30%), Postives = 263/270 (97.41%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAA 61
           +SACASSAIAAVAISSSSS KNGCPK ASNFLTGKKLRLRNL AA    VAPR+VPVCAA
Sbjct: 7   SSACASSAIAAVAISSSSSQKNGCPK-ASNFLTGKKLRLRNLTAA--TAVAPRSVPVCAA 66

Query: 62  ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 121
           ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG
Sbjct: 67  ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 126

Query: 122 IFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNT 181
           IFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNT
Sbjct: 127 IFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNT 186

Query: 182 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 241
           DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 187 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 246

Query: 242 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           IYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 247 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 273

[Close]
BLAST of CsaV3_5G030270 vs. NCBI nr
Match: XP_022957420.1 (chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998486.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita maxima] >XP_023515906.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534.3 bits (1375), Expect = 6.3e-148
Identity = 258/271 (95.20%), Postives = 262/271 (96.68%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFLTGK+LRLR   AAA   VAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA---VAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of CsaV3_5G030270 vs. NCBI nr
Match: TYK15728.1 (chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147
Identity = 258/266 (96.99%), Postives = 260/266 (97.74%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAI  SSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAI--SSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFA 267
           HIYTGTGPIDNLFAHLADPGHATVFA
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFA 262

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.4e-134
Identity = 232/273 (84.98%), Postives = 243/273 (89.01%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNG--CPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPV 60
           MASACASS IAAVA SS SS +NG       ++FL G++LR+   +   TA  A     V
Sbjct: 1   MASACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSA---TTV 60

Query: 61  CAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG 120
           C AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG
Sbjct: 61  CVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG 120

Query: 121 AAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGC 180
           AAGIFIPE LTKIGILNTPSWYTAGE EYFTDTTTLFIVEL+ IGWAEGRRWADI+KPGC
Sbjct: 121 AAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGC 180

Query: 181 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAW 240
           VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAW
Sbjct: 181 VNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAW 240

Query: 241 FQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           FQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 FQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 7.3e-131
Identity = 228/274 (83.21%), Postives = 241/274 (87.96%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNG--CPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPV 60
           MASACASS IAAVA SS SS KNG       ++FL GK+LR+        A V  R+V V
Sbjct: 1   MASACASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLRVSKF----IAPVGSRSVAV 60

Query: 61  CA-AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAML 120
            A AADPDRPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPESL+WN QAELVH RWAML
Sbjct: 61  SAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAML 120

Query: 121 GAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPG 180
           GAAGIFIPEFLTKIG+LNTPSWYTAGE EYFTDTTTLF++EL+ IGWAEGRRWADI+KPG
Sbjct: 121 GAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 180

Query: 181 CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGA 240
           CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGA
Sbjct: 181 CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGA 240

Query: 241 WFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           WFQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Sbjct: 241 WFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.6e-125
Identity = 214/270 (79.26%), Postives = 230/270 (85.19%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAA 61
           +S CASSAIAA++              + +FL GKKLRL+       AV  P       A
Sbjct: 3   SSLCASSAIAAIS--------------SPSFLGGKKLRLKK-KLTVPAVSRPDASVRAVA 62

Query: 62  ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 121
           ADPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+WN QAE+VHCRWAMLGAAG
Sbjct: 63  ADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 122

Query: 122 IFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNT 181
           IFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNT
Sbjct: 123 IFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 182

Query: 182 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 241
           DP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 183 DPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQH 242

Query: 242 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           IYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.4e-83
Identity = 153/272 (56.25%), Postives = 187/272 (68.75%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSS--SSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTV-P 60
           MA A AS+  + + +S+S   +     P +AS   TG +L    L      V A + V  
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERL----VVVRAGKEVSS 60

Query: 61  VCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAML 120
           VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML
Sbjct: 61  VCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAML 120

Query: 121 GAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPG 180
              GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG
Sbjct: 121 AVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPG 180

Query: 181 CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGA 240
            V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G 
Sbjct: 181 SVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGF 240

Query: 241 WFQHIYTGTGPIDNLFAHLADPGHATVFAAFT 270
            FQ  YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 CFQATYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.3e-57
Identity = 120/253 (47.43%), Postives = 149/253 (58.89%), Query Frame = 0 

Query: 12  AVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAAADPDRPLWFP 71
           A   + +S++  G   L S FL G   +L    A      +P         +  +  W P
Sbjct: 2   ATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSP---SASFKVEAKKGEWLP 61

Query: 72  GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKI 131
           G   P +L GSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE  T I
Sbjct: 62  GLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSI 121

Query: 132 GILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLT 191
           GI+N P WY AG+ EYF  ++TLF++E I   + E RRW DI  PG VN DPIF    L 
Sbjct: 122 GIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 181

Query: 192 GTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 251
             +VGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP DN
Sbjct: 182 AGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 241

Query: 252 LFAHLADPGHATV 265
           L  H++DP H T+
Sbjct: 242 LLQHISDPWHNTI 245

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match: A0A0A0KV98 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G589390 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.6e-157
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match: A0A1S3BDM5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488886 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.4e-153
Identity = 265/271 (97.79%), Postives = 267/271 (98.52%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 269

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match: A0A6J1KAB5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493102 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148
Identity = 258/271 (95.20%), Postives = 262/271 (96.68%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFLTGK+LRLR   AAA   VAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA---VAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match: A0A6J1H0H5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458830 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148
Identity = 258/271 (95.20%), Postives = 262/271 (96.68%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAISSSSS KNGCPK+ SNFLTGK+LRLR   AAA   VAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAISSSSSQKNGCPKV-SNFLTGKRLRLRKYTAAA---VAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGL+SDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           HIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFAAFTPK 267

[Close]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match: A0A5D3CWU8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002270 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 258/266 (96.99%), Postives = 260/266 (97.74%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCA 60
           MASACASSAIAAVAI  SSSSKNGCPKLASNFL GKKLRLRNLNAA  AVVAPR+ PVCA
Sbjct: 1   MASACASSAIAAVAI--SSSSKNGCPKLASNFLAGKKLRLRNLNAA--AVVAPRSAPVCA 60

Query: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120
           AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA
Sbjct: 61  AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAA 120

Query: 121 GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180
           GIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN
Sbjct: 121 GIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVN 180

Query: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240
           TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ
Sbjct: 181 TDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 240

Query: 241 HIYTGTGPIDNLFAHLADPGHATVFA 267
           HIYTGTGPIDNLFAHLADPGHATVFA
Sbjct: 241 HIYTGTGPIDNLFAHLADPGHATVFA 262

[Close]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.2e-126
Identity = 214/270 (79.26%), Postives = 230/270 (85.19%), Query Frame = 0 

Query: 2   ASACASSAIAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAA 61
           +S CASSAIAA++              + +FL GKKLRL+       AV  P       A
Sbjct: 3   SSLCASSAIAAIS--------------SPSFLGGKKLRLKK-KLTVPAVSRPDASVRAVA 62

Query: 62  ADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 121
           ADPDRP+WFPGSTPP WLDGSLPGDFGFDPLGL+SDP+SL+WN QAE+VHCRWAMLGAAG
Sbjct: 63  ADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 122

Query: 122 IFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNT 181
           IFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNT
Sbjct: 123 IFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNT 182

Query: 182 DPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQH 241
           DP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQH
Sbjct: 183 DPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQH 242

Query: 242 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           IYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 243 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 257

[Close]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 308.5 bits (789), Expect = 5.2e-84
Identity = 153/272 (56.25%), Postives = 187/272 (68.75%), Query Frame = 0 

Query: 1   MASACASSAIAAVAISSS--SSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTV-P 60
           MA A AS+  + + +S+S   +     P +AS   TG +L    L      V A + V  
Sbjct: 1   MAFAIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERL----VVVRAGKEVSS 60

Query: 61  VCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAML 120
           VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDP++L+W  QAEL+H RWAML
Sbjct: 61  VCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAML 120

Query: 121 GAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPG 180
              GI IPE L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG
Sbjct: 121 AVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPG 180

Query: 181 CVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGA 240
            V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAMLA +G 
Sbjct: 181 SVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGF 240

Query: 241 WFQHIYTGTGPIDNLFAHLADPGHATVFAAFT 270
            FQ  YT   PI+NL AHLADPGH  VF+AFT
Sbjct: 241 CFQATYTSQDPIENLMAHLADPGHCNVFSAFT 268

[Close]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-57
Identity = 120/259 (46.33%), Postives = 155/259 (59.85%), Query Frame = 0 

Query: 10  IAAVAISSSSSSKNGCPKLASNFLTGKKLRLRNLNAAATAVVAPRTVPVCAAADPDRPLW 69
           +A V   +S+S    C      FLTG   RL N + + T++ +          +  +  W
Sbjct: 1   MATVTTHASASIFRPCTS-KPRFLTGSSGRL-NRDLSFTSIGSSAKTS-SFKVEAKKGEW 60

Query: 70  FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLT 129
            PG   P +L GSL GD GFDPLGLA DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Sbjct: 61  LPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFT 120

Query: 130 KIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNK 189
           KIGI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    
Sbjct: 121 KIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYS 180

Query: 190 LTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPI 249
           L   +VGYPGG+ F+PL +        +E + KE+ NGRLAMLA +G   QH  TG GP 
Sbjct: 181 LPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPF 240

Query: 250 DNLFAHLADPGHATVFAAF 269
           +NL  HL+DP H T+   F
Sbjct: 241 ENLLQHLSDPWHNTIVQTF 250

[Close]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match: AT5G28450.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 215.7 bits (548), Expect = 4.6e-56
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 169 RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGR 228
           R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGR
Sbjct: 71  RAPDIIKPGSVNTDPVFPNNKLTGTDIGYPGGLWFDPLGWGSGSPTKIKELRTKEIKNGR 130

Query: 229 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 272
           LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Sbjct: 131 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 173

[Close]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-51
Identity = 98/204 (48.04%), Postives = 129/204 (63.24%), Query Frame = 0 

Query: 65  DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFI 124
           +R  W PG  PPP+LDG+L GD+GFDPLGL  DPESL+W  QAELVH R+AMLG AGI  
Sbjct: 45  ERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILF 104

Query: 125 PEFLTKIGILNTPSWYTAGELEY-FTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDP 184
            + L   GI N P WY AG +++ F  T TL +V+ + +G+AE +R+ D + PG    + 
Sbjct: 105 TDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEG 164

Query: 185 IF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQ 244
            F       L G + GYPGG   +PLG      +   + + KEIKNGRLAM+A++G + Q
Sbjct: 165 SFFFGLEAALEGLEPGYPGGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQ 224

Query: 245 HIYTGTGPIDNLFAHLADPGHATV 265
              T TGPIDNL  HL++P H T+
Sbjct: 225 ASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:
BLAST of CsaV3_5G030270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135326.13.3e-157100.00chlorophyll a-b binding protein 7, chloroplastic [Cucumis sativus] >KGN51671.1 h... [more]
XP_008446036.11.1e-15297.79PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo][more]
XP_038892923.15.7e-14996.30chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida][more]
XP_022957420.16.3e-14895.20chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata] >XP_022998... [more]
TYK15728.13.1e-14796.99chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa][more]
BLAST of CsaV3_5G030270 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P107081.4e-13484.98Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
P138697.3e-13183.21Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S... [more]
Q9SYW84.6e-12579.26Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... [more]
Q8LCQ47.4e-8356.25Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th... [more]
Q9SQL25.3e-5747.43Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh... [more]
BLAST of CsaV3_5G030270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KV981.6e-157100.00Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A1S3BDM55.4e-15397.79Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A6J1KAB53.0e-14895.20Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1H0H53.0e-14895.20Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5D3CWU81.5e-14796.99Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
BLAST of CsaV3_5G030270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G61470.13.2e-12679.26photosystem I light harvesting complex gene 2 [more]
AT1G19150.15.2e-8456.25photosystem I light harvesting complex gene 6 [more]
AT3G47470.11.1e-5746.33light-harvesting chlorophyll-protein complex I subunit A4 [more]
AT5G28450.14.6e-5692.23Chlorophyll A-B binding family protein [more]
AT1G45474.11.2e-5148.04photosystem I light harvesting complex gene 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 76..261
e-value: 4.3E-77
score: 260.3
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 75..241
e-value: 1.2E-53
score: 182.0
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..271
NoneNo IPR availablePANTHERPTHR21649:SF116CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 1..271
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 62..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G030270.1CsaV3_5G030270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0016020 membrane