CsaV3_5G028730 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G028730
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger CCCH domain-containing protein 15-like
Location	chr5: 23862912 .. 23866616 (-)
RNA-Seq Expression	CsaV3_5G028730
Synteny	CsaV3_5G028730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGAAGGGGCAATACATGTAAAAAGCGAAGGAGAGCTTGGAGTTTTTAAGTACAGCAAATGTTTCTGTTAGAATATCAGTTTTCTCCAAAACCGCTTCAATTTATTAATTAATTATTATTATTATTGTTTCTAATTTTCTAATTATTTTGTTTTATTTTTTTCTCTATGGTTTTAGCTCTGTTTTCCCTCCATTTCCGATTCCCCCAAATCTTCCTCCTATAAATCCATTTCATCTTCTCCATTCCTCAACTCTCTCTTTTTCTTTCTTTCTTTCTCTCTCTGCGTATTCTTTGCCGATTCAGGTCAGTTCTTCATTCATCTTTCTGTTTATTATCGCATTAATGGATGATACTTTTTTCTATGTTTAATTAATTAATCACAACTTTCATTATTTAGTATTCAACTTCTTTGATCATCTATTCGTGATGCTTTCGTTTCGATTGAGTTATAGGTTACTGTTTATTGTGGAAAATTCTTGATCGATCATTTATCTTATTAATCAGTTTCTTGAATGCTTGCTTTGGATTTTTTTTTTTTTTTAGTTTCGGTTTCTCTCTGTTTCGTTTTTCTTGTTTTTGTGGAACTGATGTACGGGAATCGAGAACTTTCTGTTGATCGTATGTTTATTGAATTTTGAGATCGTAAAGAAAATGATCTCTGAATCTTTCTTTTTGAATGTTTGAGTTCGGATCATCGAAATGAGTTAATGTTTGAATTTGGTGTTGTTTTGTTTACTGTTATGGAAGAAATTGTGCGGATGTGGTTTATGAGTAGTTTGATTAATCTGTACTGTAATTTGTAGTTGAAATGCATAAAAGCACCACTTCTGCGTCGAATACTATTGCTGCTGCGACTACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTCTCTCTTCCAGTGACCCTCTATGGTGAGTCGACTCACGCGGATTCATCAATCTCGGCTTCCAAATCGATAAACAATCATTTCTATCAAACGCGTGTCGTACAAGATCACCAGGAAATGGTTAATCGCCATAGCCTCTGTCTCACTCAGCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGACAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTAAGCAAACACCTCAGCCTTCTGATCCAGGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGCGGAAGGATTCCGCGGACTCAGTCTAGCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGAGTTGAGGTGGAGAGATTTTCGCTCCCGAAGAGCATCTCCGTGAGGTCCAATGGATACTTGAAAATGGCACAAACCGGAACCAGCCAGGGCGGAAAGATCCGCGCCTCATCTCGCCCCAGAACTGCAAGTCCTGTCAAAGTTACGGTAATGACACGTAATTTATTTGACATGATTGCCCTTTTCATTCAACTAATCACGTTAATTCATTGAGCCATATAATATCTGAATTAATTTTAATCACGTGATTCTAGAGAGATTATAGCTCCAATTGCTTTAGGAAGAAGAAATTTTTTGGTTACATGGTAGCTAGGATGATAACTTCTTTAGTATCTTTGCTTCAATTATAATTACTTTTTTTCGTAAAAACAATCATATAACTAATTAACCACATTAAAATGATTCTTGACAAATGGTTAATAATAGGACGGAAGTTTCTAATAGTATATAATATGCATTCTTTTGAGTACCAAAGCTTCTAGTATTTATTTCCAAATATTGTATAGGTACTAAATGTGGAATATGAAACATTATCATTGTGATGTTAAATAAACGCATAATGTTAGTTAGTTAGACGTAGTTACAAGTAGAGACAATTCATTATCATAGTGAAAATTTGACTCTGCACCAATCCTATTATTGTAGTTAATATTGAGTCACATATGCTGAATTTGTTGTTTTTTCTTCTATCTTTTCTTAAACATCTGCAGTCAATTTTTCTTATTATTGCAATTACTTATTTACTTCCCCTTTCCCTTTTTGTCCTTTTTTTAGATTTAGTGCAGAGTGGCAATATTCTTTAAGATATATTCATCTCTATACTTTGGATTCTCATCAAATACATAAACGAAGAATTAAAATAATGGTTGGACACAATTTGATAGGATACATAACTCTAAGATGCACCTAACGTGTCTTTCTCTTATTGGCCAAGTGTAGTCAATTTTTTTTCTTCCTTGTAGTTCATACGTTGAATGTGTGATAACTTTTTCTTCTTCAATCTTTCTTAAGAGTAGCAGTCAAGTTTTTCCTTTTCTAGTTTTATTCTCAGCACTTATTGTAGCTCCTATACTAAGTCCCATAGGTTGAATGCGTTGATTTCAATTTGTATTAGGTACTCTTTCAGTCAAGTTTTTTCTTGCTATGTTGGGCCTTCTTTAAATTTGATTATGTTTATCAACAATTCTGGTTCATAGAAAGCAGTGCAAATCAGTTCCTTCCCAAACTTCATATTTTATTAAACAGGATTGATTTCGATTGATACACTGATAACAAATTACTTTCTAAATAAGTACACACTAGTCTAATGCTTTAGTCATTATTATAGTTTCATGATTTTCCTTTGAACAAAACTATTATAAGATGGTCAATTTGAGAGAAGAAATGGTCTGTTGATTTGAAAATATACAGCAGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTAGAACTTGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTTTGCAACAAATGGCAGGAAACAGGCAGCTGCCCCTATGGAGACCACTGCCAGTTCGCCCATGGAATAGAGGAGCTTCGGCCTGTGATCCGCCACCCCCGCTACAAGACAGAAGTCTGCCGGATGGTCCTCGCCGGAGTTGTCTGCCCTTATGGTCACCGCTGCCACTTCCGCCATGCTCTCACTGACCAGGAAAGGCTGATGGGGACACTCAAGCCAACCTGCAGGACCTCCACCACCCCTAAGCTGGACAGGTGAATTTCATTTTACTAAACTGATCATCATCCTTAATTCAACACATAAAACGTGCGATGATATAAGTAAGTCATACACAGTGATTTGTTTGTTTGTTGTAAGCCTCAAATGAGAGCCGTAAATAATATCCCATATATAAGTATAAAACACAAAGTAAGAACCATATATACAAATCATTAGAGACCAATTATTAGTTTGTTCTGGTAGATATTGATGAGGCCACAATGATGGAGATAACTAGATAAGAAGAAAATTTTAGGAAGAAAGAGAGTCAATACCCTTTTGTTATATTTTGCTGTATTGATCCATTTTGTTCTTCCAAACTCCATGTTTTTTGAAACTCTAATAGCCTGTGCCTTAAGCAGAGCAAACTATGTGTAAAGGCTGAGAATACCTTTTTTGGGGACACTTCATTTGATTGTTTCAATGGACAAATTAAAGTTGTTCATTCTCTTATATATGCTCTTTTTTAGGATTAATTATCACTTTTGGAAGAGTACTACCGTAAAAATGAATAATGATTAAATGCATTATGCACCAATTTCAAATGCTATCTATCTCTCTATCACATATATAGATA

mRNA sequence

ATGCATAAAAGCACCACTTCTGCGTCGAATACTATTGCTGCTGCGACTACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTCTCTCTTCCAGTGACCCTCTATGGTGAGTCGACTCACGCGGATTCATCAATCTCGGCTTCCAAATCGATAAACAATCATTTCTATCAAACGCGTGTCGTACAAGATCACCAGGAAATGGTTAATCGCCATAGCCTCTGTCTCACTCAGCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGACAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTAAGCAAACACCTCAGCCTTCTGATCCAGGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGCGGAAGGATTCCGCGGACTCAGTCTAGCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGAGTTGAGGTGGAGAGATTTTCGCTCCCGAAGAGCATCTCCGTGAGGTCCAATGGATACTTGAAAATGGCACAAACCGGAACCAGCCAGGGCGGAAAGATCCGCGCCTCATCTCGCCCCAGAACTGCAAGTCCTGTCAAAGTTACGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTAGAACTTGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTTTGCAACAAATGGCAGGAAACAGGCAGCTGCCCCTATGGAGACCACTGCCAGTTCGCCCATGGAATAGAGGAGCTTCGGCCTGTGATCCGCCACCCCCGCTACAAGACAGAAGTCTGCCGGATGGTCCTCGCCGGAGTTGTCTGCCCTTATGGTCACCGCTGCCACTTCCGCCATGCTCTCACTGACCAGGAAAGGCTGATGGGGACACTCAAGCCAACCTGCAGGACCTCCACCACCCCTAAGCTGGACAGGTGA

Coding sequence (CDS)

ATGCATAAAAGCACCACTTCTGCGTCGAATACTATTGCTGCTGCGACTACTATGTCATCGTCGTCGCAGCTCAAGTCGCAGCTTCAAACAAACGATGTTTATGCTTCCCTCTATAATTCACCAATCTTTGCTCCAAAGCAATCCGTGCCGGTCTCTCTTCCAGTGACCCTCTATGGTGAGTCGACTCACGCGGATTCATCAATCTCGGCTTCCAAATCGATAAACAATCATTTCTATCAAACGCGTGTCGTACAAGATCACCAGGAAATGGTTAATCGCCATAGCCTCTGTCTCACTCAGCTTCGAGAAGCAACCGAAGAAGCCGATGCTCTTCGACAAGAGAATATCCACCTCAGAAGTATTAATCACGAGCTAAGCAAACACCTCAGCCTTCTGATCCAGGCTTCGGTTCAGAAACAGTACGGCTCCTCTGATCAAGCTCCTCCGTTTAATTTTGCGGAAGGATTCCGCGGACTCAGTCTAGCAGAGAAGGGAGCAAGCAGTTCGGCATGGGAGGATATTTCCGATGAGAGTCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGAGTTGAGGTGGAGAGATTTTCGCTCCCGAAGAGCATCTCCGTGAGGTCCAATGGATACTTGAAAATGGCACAAACCGGAACCAGCCAGGGCGGAAAGATCCGCGCCTCATCTCGCCCCAGAACTGCAAGTCCTGTCAAAGTTACGAAGGTGTACGTGCAAGGAGTGAAAGAAGAGGAAAAGCCACTAGAACTTGAGGTGTACAACCAGGGCATGTTCAAAACCGAGCTTTGCAACAAATGGCAGGAAACAGGCAGCTGCCCCTATGGAGACCACTGCCAGTTCGCCCATGGAATAGAGGAGCTTCGGCCTGTGATCCGCCACCCCCGCTACAAGACAGAAGTCTGCCGGATGGTCCTCGCCGGAGTTGTCTGCCCTTATGGTCACCGCTGCCACTTCCGCCATGCTCTCACTGACCAGGAAAGGCTGATGGGGACACTCAAGCCAACCTGCAGGACCTCCACCACCCCTAAGCTGGACAGGTGA

Protein sequence

MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR*

Homology

[Close]

BLAST of CsaV3_5G028730 vs. NCBI nr
Match: XP_011655475.1 (zinc finger CCCH domain-containing protein 15 isoform X2 [Cucumis sativus] >KGN52127.2 hypothetical protein Csa_009299 [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240

Query: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 350

[Close]

BLAST of CsaV3_5G028730 vs. NCBI nr
Match: XP_004151447.1 (zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 685.3 bits (1767), Expect = 2.8e-193
Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. NCBI nr
Match: XP_008467172.1 (PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X2 [Cucumis melo])

HSP 1 Score: 682.6 bits (1760), Expect = 1.8e-192
Identity = 345/350 (98.57%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240

Query: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 350

[Close]

BLAST of CsaV3_5G028730 vs. NCBI nr
Match: XP_008467171.1 (PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo])

HSP 1 Score: 677.9 bits (1748), Expect = 4.5e-191
Identity = 345/351 (98.29%), Postives = 347/351 (98.86%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. NCBI nr
Match: KAA0046296.1 (zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa] >TYK30461.1 zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 676.4 bits (1744), Expect = 1.3e-190
Identity = 344/351 (98.01%), Postives = 346/351 (98.58%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-69
Identity = 153/296 (51.69%), Postives = 199/296 (67.23%), Query Frame = 0


Query: 54  PVTLYGESTHADSS---ISASKSINNHFYQTR-VVQDHQEMVNRHSLCLTQLREATEEAD 113
           P +  G S    SS   +S+S   +  +  TR ++Q  Q+MVNR +LC T+L EA+ EA+
Sbjct: 7   PFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAE 66

Query: 114 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPF----NFAEGFRGLSLAEKG 173
           ALR EN  LRS+N  L   L+ LI++S+Q ++   D   P     N + G       E  
Sbjct: 67  ALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVENQ 126

Query: 174 ASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTG---TSQGGK 233
             +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q GK
Sbjct: 127 NRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGK 186

Query: 234 IRAS-SRPRTASPVKVT-KVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGSCP 293
            R + ++P T   V  T KVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+CP
Sbjct: 187 PRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCP 246

Query: 294 YGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 334
           YGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 YGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 294

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.4e-55
Identity = 135/311 (43.41%), Postives = 169/311 (54.34%), Query Frame = 0


Query: 40  SPIFAPKQSVPVSLPVTLYGEST-----HADSSISASKSINNHFYQTRVVQDHQEMVNRH 99
           SP F      P++  V+L   S+       D   +A+ +        R+   +QE+ +R+
Sbjct: 47  SPSFGFSSPSPLATSVSLSPSSSASLVDDGDDGGAAADATGQRLQLARLALQYQEVADRY 106

Query: 100 SLCLTQLREATEEADALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAE 159
            LCL+ L EA EEA ALR EN  LR  N +L+  L+LL          S         A+
Sbjct: 107 ELCLSHLAEAAEEAAALRLENAELRVTNSDLALRLALL----------SGKHTAAVAVAD 166

Query: 160 GFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ 219
             R L L E+  +++  E   ++                    LPKSISVRS  YLK+ Q
Sbjct: 167 EIRRLRLGEQKVAAATKERTPEKLAV-----------------LPKSISVRSTSYLKLNQ 226

Query: 220 TGTSQGGKIRASSR-PRTAS----PVKVTKVYVQGVKEEEKP-------LELEVYNQGMF 279
              +      A +R PRT+S    P    + Y  G K +E+         ELEVYNQGMF
Sbjct: 227 QSQAATATSAAPNRKPRTSSNPTNPPNSQRAYDGGKKGDEQKAQPADSGAELEVYNQGMF 286

Query: 280 KTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHF 334
           KTELCNKW+ETG CPYGD CQFAHG+ ELRPVIRHPRYKT VCRMVLAG VCPYGHRCHF
Sbjct: 287 KTELCNKWEETGDCPYGDQCQFAHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHF 330

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-53
Identity = 125/272 (45.96%), Postives = 160/272 (58.82%), Query Frame = 0


Query: 70  ASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRSINHELSKHL 129
           A+ +  +  +   +   +QEM NR  LCL+ L +A +EA ALRQEN  LR  N++L+  +
Sbjct: 86  AAAATEHRLHLAHLALQYQEMANRFELCLSHLADAADEAAALRQENAELRVANNDLACRI 145

Query: 130 SLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVE 189
           +         ++G   Q+     A   R L L  K  +  A        P ++M      
Sbjct: 146 A---------KFGGR-QSSAIALAGDLRRLRL-PKEQTVPALPPPPQSPPAALM---NPV 205

Query: 190 GVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV-------YV 249
            V  ++  LPKSIS+RS GY K+     +QGGK R S      S      +       + 
Sbjct: 206 AVPEKQAVLPKSISIRSTGYQKL-----NQGGKHRVSKPVNVGSQRVFVGIDGAEGGEHK 265

Query: 250 QGVKEEEKP---LELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 309
            GVK+EE P   LE EVYNQGMFKTELCNKW+ETG+CPYGD CQFAHG+ ELRPVIRHPR
Sbjct: 266 VGVKKEEPPMGGLEFEVYNQGMFKTELCNKWEETGACPYGDQCQFAHGVAELRPVIRHPR 325

Query: 310 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQER 332
           YKT+VCRMVLAG VCPYGHRCHFRH++T  +R
Sbjct: 326 YKTQVCRMVLAGGVCPYGHRCHFRHSITPADR 338

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.7e-52
Identity = 143/344 (41.57%), Postives = 182/344 (52.91%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSS----SQLKSQLQTND-------VYASLYNSPIFAPKQSV 60
           M K   S    +A  T ++SS    S +  Q   N         +ASLYNS IF+P+   
Sbjct: 1   MEKLAASTVTDLACVTAINSSPPPLSPISEQSFNNKHQEEFAASFASLYNS-IFSPESLS 60

Query: 61  PVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEAD 120
           P   P +     +  D+      +  +   Q +++ ++ E+   + LCL +L+    E D
Sbjct: 61  P--SPPSSSSPPSRVDT------TTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELD 120

Query: 121 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSS 180
           +LR EN  LR  N +L K    LI+ S       S  AP  N    FR            
Sbjct: 121 SLRHENDSLRFENSDLLK----LIRISTSSSSSVSPPAPIHN--RQFR------------ 180

Query: 181 AWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRP 240
               ISD            +    ER SLPKSISVRS GYLK+     +   +    S  
Sbjct: 181 --HQISDSR--------SAKRNNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSN 240

Query: 241 RTASPVKVTKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIE 300
             +S  KV  V  +G   E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAHGI+
Sbjct: 241 SVSSSQKVCVVQTKG---EREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGID 300

Query: 301 ELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 334
           ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Sbjct: 301 ELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQERMM 304

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot
Match: Q10MN8 (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301500 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.5e-30
Identity = 102/313 (32.59%), Postives = 143/313 (45.69%), Query Frame = 0


Query: 34  YASLYNSPIFAPKQSVPVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNR 93
           +AS    P+ +P   V         G S    S + AS        +  ++   + +  R
Sbjct: 186 WASSLEKPLTSPSSCVS-------DGRSGGYSSPLGASAEREREVREAEMLL--RAIAER 245

Query: 94  HSLCLTQLREATEEADALRQENIHLRSINHELSKHLSLLI-QASVQKQYGSSDQAPPFNF 153
           +  C  +LR+A  E   L +E + L + N     HLSLL+ +   +++  +S  APP   
Sbjct: 246 YDDCFLRLRDAAAELSDLHRERLRLAAEN----LHLSLLLEELESEQRKQASAMAPP--- 305

Query: 154 AEGFRGLSLAEKGASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKM 213
                                             ++E  E  +   PKSIS+RS GYL  
Sbjct: 306 ----------------------------------KLEEDEAAQGGAPKSISIRSPGYLSQ 365

Query: 214 AQ---TGTSQGGKIRASSRPRTASPVKVTKVYVQGVK--------------EEEK---PL 273
                    Q  ++RAS     + P  +  ++V G +              EE+K    +
Sbjct: 366 KPPQGQARPQRLRVRASQAMEISHPNCL--IFVMGNQCSPKEAAAAGDEEDEEDKGGGEV 425

Query: 274 ELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGV 326
           E+E Y QG  KTELCNKW E G+CPYG  C+FAHG++ELRPVIRHPRYKT  C+M  A  
Sbjct: 426 EVEAYRQGAAKTELCNKW-ERGACPYGARCRFAHGLQELRPVIRHPRYKTLPCQMFAAAS 445

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL
Match: A0A0A0KPN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL
Match: A0A1S3CT37 (zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 8.9e-193
Identity = 345/350 (98.57%), Postives = 347/350 (99.14%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240

Query: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 350

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL
Match: A0A1S3CSW3 (zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504589 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.2e-191
Identity = 345/351 (98.29%), Postives = 347/351 (98.86%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL
Match: A0A5D3E4G4 (Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00010 PE=4 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 6.4e-191
Identity = 344/351 (98.01%), Postives = 346/351 (98.58%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAAATTMSSSSQLKSQLQTND YASLYNSPIFAPKQ VPVSLP+TLYG+
Sbjct: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDAYASLYNSPIFAPKQPVPVSLPLTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STHADSSIS SKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS
Sbjct: 61  STHADSSISGSKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLIQASVQKQYGSSDQAPPFNF EGFRGLSLAEKGASSSAWEDISDESPT
Sbjct: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFVEGFRGLSLAEKGASSSAWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT-K 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVT K
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTQK 240

Query: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300
           VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Sbjct: 241 VYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR 300

Query: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR
Sbjct: 301 YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351

[Close]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL
Match: A0A6J1FFE7 (zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444951 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 327/350 (93.43%), Postives = 333/350 (95.14%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSSSQLKSQLQTNDVYASLYNSPIFAPKQSVPVSLPVTLYGE 60
           MHKSTTSASNTIAA TTMSSSSQLKSQLQTN+VYASLYNS IFAPKQSVPVSLP TLYG+
Sbjct: 1   MHKSTTSASNTIAAGTTMSSSSQLKSQLQTNNVYASLYNSSIFAPKQSVPVSLPSTLYGD 60

Query: 61  STHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEADALRQENIHLRS 120
           STH D SISASKSINNH YQT VVQDHQEMVNRHSLCLT LREATEEADALRQENIHLRS
Sbjct: 61  STHTD-SISASKSINNHLYQTCVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRS 120

Query: 121 INHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSSAWEDISDESPT 180
           INHELSKHLSLLI ASVQKQYGSSDQ PPFNF EGFRGLS+AEKGASSS WEDISDESPT
Sbjct: 121 INHELSKHLSLLIHASVQKQYGSSDQTPPFNFVEGFRGLSVAEKGASSSTWEDISDESPT 180

Query: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRPRTASPVKVTKV 240
           SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQ G+SQGGK+R SSRPRTASPVKVTKV
Sbjct: 181 SVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQGGSSQGGKVRVSSRPRTASPVKVTKV 240

Query: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300
           YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Sbjct: 241 YVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY 300

Query: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGTLKPTCRTSTTPKLDR 351
           KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMG LKPTCRT+  PKLDR
Sbjct: 301 KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPTCRTA--PKLDR 347

[Close]

BLAST of CsaV3_5G028730 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 269.6 bits (688), Expect = 3.5e-72
Identity = 153/295 (51.86%), Postives = 199/295 (67.46%), Query Frame = 0


Query: 54  PVTLYGESTHADSS---ISASKSINNHFYQTR-VVQDHQEMVNRHSLCLTQLREATEEAD 113
           P +  G S    SS   +S+S   +  +  TR ++Q  Q+MVNR +LC T+L EA+ EA+
Sbjct: 7   PFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAE 66

Query: 114 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPF----NFAEGFRGLSLAEKG 173
           ALR EN  LRS+N  L   L+ LI++S+Q ++   D   P     N + G       E  
Sbjct: 67  ALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVENQ 126

Query: 174 ASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTG---TSQGGK 233
             +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q GK
Sbjct: 127 NRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGK 186

Query: 234 IRAS-SRPRTASPVKVTKVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGSCPY 293
            R + ++P T   V  TKVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+CPY
Sbjct: 187 PRGTVTKPGTCGQVSTTKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPY 246

Query: 294 GDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 334
           GDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 GDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 293

[Close]

BLAST of CsaV3_5G028730 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 265.0 bits (676), Expect = 8.6e-71
Identity = 153/296 (51.69%), Postives = 199/296 (67.23%), Query Frame = 0


Query: 54  PVTLYGESTHADSS---ISASKSINNHFYQTR-VVQDHQEMVNRHSLCLTQLREATEEAD 113
           P +  G S    SS   +S+S   +  +  TR ++Q  Q+MVNR +LC T+L EA+ EA+
Sbjct: 7   PFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEASLEAE 66

Query: 114 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPF----NFAEGFRGLSLAEKG 173
           ALR EN  LRS+N  L   L+ LI++S+Q ++   D   P     N + G       E  
Sbjct: 67  ALRLENTELRSMNLRLKNELNSLIRSSIQNRF---DHRSPLRMLSNLSIGGNDADEVENQ 126

Query: 174 ASSSAWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTG---TSQGGK 233
             +   +D++D+SPTSVM     E  ++ R SLPKSISVRSNGY K +Q G    +Q GK
Sbjct: 127 NRTVNRDDVNDKSPTSVM-----ENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGK 186

Query: 234 IRAS-SRPRTASPVKVT-KVYVQG---VKEEEKPLELEVYNQGMFKTELCNKWQETGSCP 293
            R + ++P T   V  T KVYV+G    +++E+ +E+EVYNQGM KTELCNKWQETG+CP
Sbjct: 187 PRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCP 246

Query: 294 YGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 334
           YGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Sbjct: 247 YGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLV 294

[Close]

BLAST of CsaV3_5G028730 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 205.7 bits (522), Expect = 6.2e-53
Identity = 143/344 (41.57%), Postives = 182/344 (52.91%), Query Frame = 0


Query: 1   MHKSTTSASNTIAAATTMSSS----SQLKSQLQTND-------VYASLYNSPIFAPKQSV 60
           M K   S    +A  T ++SS    S +  Q   N         +ASLYNS IF+P+   
Sbjct: 1   MEKLAASTVTDLACVTAINSSPPPLSPISEQSFNNKHQEEFAASFASLYNS-IFSPESLS 60

Query: 61  PVSLPVTLYGESTHADSSISASKSINNHFYQTRVVQDHQEMVNRHSLCLTQLREATEEAD 120
           P   P +     +  D+      +  +   Q +++ ++ E+   + LCL +L+    E D
Sbjct: 61  P--SPPSSSSPPSRVDT------TTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELD 120

Query: 121 ALRQENIHLRSINHELSKHLSLLIQASVQKQYGSSDQAPPFNFAEGFRGLSLAEKGASSS 180
           +LR EN  LR  N +L K    LI+ S       S  AP  N    FR            
Sbjct: 121 SLRHENDSLRFENSDLLK----LIRISTSSSSSVSPPAPIHN--RQFR------------ 180

Query: 181 AWEDISDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKMAQTGTSQGGKIRASSRP 240
               ISD            +    ER SLPKSISVRS GYLK+     +   +    S  
Sbjct: 181 --HQISDSR--------SAKRNNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSN 240

Query: 241 RTASPVKVTKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIE 300
             +S  KV  V  +G   E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAHGI+
Sbjct: 241 SVSSSQKVCVVQTKG---EREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGID 300

Query: 301 ELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM 334
           ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Sbjct: 301 ELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQERMM 304

[Close]

BLAST of CsaV3_5G028730 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 55.8 bits (133), Expect = 7.9e-08
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 0


Query: 262 FKTELCNKWQETGSCPYGDHCQFAHGIEEL 292
           +KT +CNKWQ TG CP+G HC FAHG  EL
Sbjct: 144 WKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of CsaV3_5G028730 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-06
Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 0


Query: 254 LEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEEL 292
           +++     +KT +CNKW+ TG CP+G  C FAHG  EL
Sbjct: 253 IQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

The following BLAST results are available for this feature:

BLAST of CsaV3_5G028730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655475.1	1.2e-194	100.00	zinc finger CCCH domain-containing protein 15 isoform X2 [Cucumis sativus] >KGN5...	[more]
XP_004151447.1	2.8e-193	99.72	zinc finger CCCH domain-containing protein 15 isoform X1 [Cucumis sativus]	[more]
XP_008467172.1	1.8e-192	98.57	PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X2 [Cucumi...	[more]
XP_008467171.1	4.5e-191	98.29	PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumi...	[more]
KAA0046296.1	1.3e-190	98.01	zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucumis melo var....	[more]

BLAST of CsaV3_5G028730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9F5	1.2e-69	51.69	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2ZVY5	6.4e-55	43.41	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L5G1	2.1e-53	45.96	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C9N3	8.7e-52	41.57	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q10MN8	5.5e-30	32.59	Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja...	[more]

BLAST of CsaV3_5G028730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPN3	1.4e-193	99.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576700 PE=4 SV=1	[more]
A0A1S3CT37	8.9e-193	98.57	zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3CSW3	2.2e-191	98.29	zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo OX...	[more]
A0A5D3E4G4	6.4e-191	98.01	Zinc finger CCCH domain-containing protein 15-like isoform X1 OS=Cucumis melo va...	[more]
A0A6J1FFE7	1.1e-179	93.43	zinc finger CCCH domain-containing protein 15-like isoform X2 OS=Cucurbita mosch...	[more]

BLAST of CsaV3_5G028730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68200.2	3.5e-72	51.86	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	8.6e-71	51.69	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G66810.1	6.2e-53	41.57	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G35430.1	7.9e-08	66.67	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	1.9e-06	47.37	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..121
None	No IPR available	GENE3D	4.10.1000.10		coord: 255..294 e-value: 1.5E-18 score: 67.8 coord: 295..331 e-value: 1.5E-9 score: 39.1
None	No IPR available	PANTHER	PTHR12547:SF141	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15	coord: 56..338
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 56..338
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 261..288 e-value: 5.1E-9 score: 46.0 coord: 299..326 e-value: 3.8E-4 score: 29.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 262..287 e-value: 5.3E-12 score: 45.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 299..327 score: 12.802603
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 261..289 score: 16.492517
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 295..329
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 258..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G028730.1	CsaV3_5G028730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding