CsaV3_5G028660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G028660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	histone chaperone ASF1B-like
Location	chr5: 23789580 .. 23792704 (+)
RNA-Seq Expression	CsaV3_5G028660
Synteny	CsaV3_5G028660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAATTTGGGCACTTCATTTCCCTCCAAAATTTTCAGCGGCGGCGATATATAATCGACGAACTCCGATCTTCGTCTTTCTTCTTTGGATTATATTCAACTTCATCAGTGCTGGTAACCATCGTTATTCAGGTCAGGTTTTCTCAGCTTGTCGATGAGTGATCTTCTAATTAGGGCTAACATCAATCAATTTGTCGAAGCAATTACAGCGCTCCGTTTCTGTTTCTGGCGATGAGTGCCGTTAACATTACAAACGTCACGGTTTTGGATAACCCTGCTGCTTTTCTGAATCCATTTCAGTTCGAGATCTCATACGAGTGCTTGACTTCTCTTAAAGACGGTAATTTTGCAGTTTTATTTTGTTAGATCTTATTGCGTCATCGGTATCTGCAGTATGAGTTTTAAAATGATGGTATAAACAGTTGATTTTGGCTTCGGTTTTAGTTCGATTCACTAGATTTCATAGGAAATGGAAAACTATTCGAGGGGTTGCTTCCAATTTGCTTTGATTGAGTTGGAAATGAAGATTGGCAGTTGCCAATTTAGGAAAACCCTAGAATTACATATGCTACTTGACTTGCAAACTGGATATTTGTGTATGGTTAAGGTTAATGATTCACATCATACACAAAGTAACGACTTTAATTTCGTTTTATGGAAGGAAACTTTGTTCCCTGATATCTTTTTTAGTATACAAAATTTTAAATTCAGTTAAAATCTTGTAACCTCACGCCTGTATTCTAATGATGTGCGTTTTCCTGCTTAAATCTTGATTTTGATTGTTGAGCCTTGCTACCTTGATCTTTCCGAGGAACTTTTTTGAGATTTTGAAAGTTTGTTTGTTTGTTTGTGTGTATATGTATTGTATAGCTCACTTTGTCTGAAAGAATCTGCCCCTTAGGCCTTTTCAACGCTTGATACTTATTTCAAAAATTCTTGCCCCCCGTCTTTAGATTCTTTTTGTTTTTCTTGTGGGGGGTTGATTGGGAACGATGAACTTTAGAAAAACCTCAATCGTGTATCATTCGAAGGTCTGTTTCTTGATTTGTGTTGATCGTGGTCACTGGATTTTCTTGGGGGATTCCCTGATTAAAACAAAAATTTACGTGCTCAAAATTTTCTTTGGGTTAAGTTTACTAGTCACTGCCAAAGTCTCTAAATTTTTACCGTGTAAAGGTTATTAAGATCAATAACCTCTTAGCTAAAATTATTAGCTTATACTTAATCTCTTGGATGAGCTTTTGGCTTTATGGGTGGTTTAATACGATTTCTACGTTGTCATTTTCTTCCTCGTTAGTATTTGTAGCTAGTTGGAATATTTTGTGAATTTCTCAAGCTATTGGGACCGTGGTCGATATATTCTATTTTGTTTTTTTTTTACTATAATAGGTATTATGTTATAAAATCAACTTTAATGACATGTTATCTCTATGATTATTCTACAGATCTGGAATGGAAACTCACCTATGTCGGATCGGCCGAGGATGAAACTTATGACCAACTTTTGGAAAGTGTTCTCGTTGGACCCATTAATGTTGGCAATTATCGTTTTGTTCTTCAGGTAATATATGTTGAATCTATCTTAACTTTATCTGTAAAGCCAAAATTACCTTTTCAATGTTGACCAAAATGTTATCTTATAAGCTAGACGTTTTGAATTTAGTGATAATCTAGCATGGTTTAAGAAGAATCGAGTTTGAATTCAAGTAAATATTGAAATCCATAATTTATTGAAGTTCGAAATTTAGGCCAATTATAACTATTTAGTTTTTGATTTGTAGTTTTAAAAATTATCCTTATAGATATACTCTCACCGTTAGTTTCTTCATTTTGTTCTCCCGTGAAGAGGTGTTTTCAAAATTCAAGCTAAGATTTGAAATTTAAGGAAAAAGAAGAATTTTGAAACCAAATGAACTTCAGTGATAACTTATCGTTAGTAACATTTCTACCATGTATGGAAAAGAGATATAGCCCTTCTCCAACACCGATTCGTCTGAATACCTGTAGAAATTTCACTGTCTCGAGTCTAATCATTGCACGAATTGGAATCTGAGTGACCTCTACTGGTGCATTTCTTGTGGTCGGATATTTTGCAGGCAGACCCTCCAGATCCTTCAAAAATCCGGGAGGAAGACATCACCGGGGTCACAGTACTTTTATTAACATGTTCATACATGGGACAGGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAACCTCCTCCAAAAGTTCTGATTGACAGGGTCCAAAGAAACATTTTAGCTGACAAGCCCAGAGTCACGAAGTTCCCAATCAATTTTCATCCAGAGAACTCTGAACATGGTGCAGAGCAACAACCATCTTCACCCCACCACTCAGTTGAAGCCCTCAACAATGAAGAAGAAGAATTACAACCACCACCATCACCATCAGCAGCAGATGAGCCACCTTTAGATAAGGAAGCCATTGATTCTGGATCTCAGCCTTCAGTCACGGCATGAGAGCTAGCCAAATTAAGGTTTGAGCCTTGAGGTGATCCATCTTTTACAACTTTTCCTCTTGGTTTGTAAGCTAAATCAGTGAAGTAGATATGTTAATTAGACCAGTTTGAGTCTGCAAAAAAGAATTTGGGAAAGATGATTTCATCTTTTCTGTTATTAAATCGAAACTCTGATAGTTCTAAATTAATTAATCATCATCTTCTTCTTGTTGAAAGTTTCTGTTTAATTCTCCCTAGCGGGTTGTTCAGTGGATCTAGATAAGATGAGGAAAACAAAGAGATTTCCACTTTATCATTCTTGCTGCTCTTTCCTTTTTCTAGGAGGATTGGCCTGCTGCAATCCTAAGACTCGACTAAAAGGTTTGATTTGACATAGTAATGGTGAAGACCCGAGAATTTGTTCACGTGTCCCTACGGCTGCAAGTTAATTTTAAAATTTAGTCTTACATTTCGAGATTCAAATCATAAATCCTTCAATCTTGTATGTCTGATGTCAATTGAATTATAATAAAAAAATAAGCATTTTTTTTTCTCGTTTTTGCACTATTTAGTGTAATAACCATAAAATAGTTGTCAACTTCTACTATCAACTTGATTTTGGACTTCATATTTTTCAC

mRNA sequence

ATGAGTGCCGTTAACATTACAAACGTCACGGTTTTGGATAACCCTGCTGCTTTTCTGAATCCATTTCAGTTCGAGATCTCATACGAGTGCTTGACTTCTCTTAAAGACGATCTGGAATGGAAACTCACCTATGTCGGATCGGCCGAGGATGAAACTTATGACCAACTTTTGGAAAGTGTTCTCGTTGGACCCATTAATGTTGGCAATTATCGTTTTGTTCTTCAGGCAGACCCTCCAGATCCTTCAAAAATCCGGGAGGAAGACATCACCGGGGTCACAGTACTTTTATTAACATGTTCATACATGGGACAGGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAACCTCCTCCAAAAGTTCTGATTGACAGGGTCCAAAGAAACATTTTAGCTGACAAGCCCAGAGTCACGAAGTTCCCAATCAATTTTCATCCAGAGAACTCTGAACATGGTGCAGAGCAACAACCATCTTCACCCCACCACTCAGTTGAAGCCCTCAACAATGAAGAAGAAGAATTACAACCACCACCATCACCATCAGCAGCAGATGAGCCACCTTTAGATAAGGAAGCCATTGATTCTGGATCTCAGCCTTCAGTCACGGCATGA

Coding sequence (CDS)

ATGAGTGCCGTTAACATTACAAACGTCACGGTTTTGGATAACCCTGCTGCTTTTCTGAATCCATTTCAGTTCGAGATCTCATACGAGTGCTTGACTTCTCTTAAAGACGATCTGGAATGGAAACTCACCTATGTCGGATCGGCCGAGGATGAAACTTATGACCAACTTTTGGAAAGTGTTCTCGTTGGACCCATTAATGTTGGCAATTATCGTTTTGTTCTTCAGGCAGACCCTCCAGATCCTTCAAAAATCCGGGAGGAAGACATCACCGGGGTCACAGTACTTTTATTAACATGTTCATACATGGGACAGGAATTTGTAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAACCTCCTCCAAAAGTTCTGATTGACAGGGTCCAAAGAAACATTTTAGCTGACAAGCCCAGAGTCACGAAGTTCCCAATCAATTTTCATCCAGAGAACTCTGAACATGGTGCAGAGCAACAACCATCTTCACCCCACCACTCAGTTGAAGCCCTCAACAATGAAGAAGAAGAATTACAACCACCACCATCACCATCAGCAGCAGATGAGCCACCTTTAGATAAGGAAGCCATTGATTCTGGATCTCAGCCTTCAGTCACGGCATGA

Protein sequence

MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESVLVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDEQLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEEEELQPPPSPSAADEPPLDKEAIDSGSQPSVTA*

Homology

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BLAST of CsaV3_5G028660 vs. NCBI nr
Match: XP_004150672.1 (probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical protein Csa_008063 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA
Sbjct: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 212

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BLAST of CsaV3_5G028660 vs. NCBI nr
Match: XP_038875350.1 (probable histone chaperone ASF1A [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 2.8e-111
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDR+QRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHS EALNNEE
Sbjct: 121 QLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSGEALNNEE 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPSPS ADEP LD+EAIDSG QPSVTA
Sbjct: 181 EELQPPPSPSPADEPSLDQEAIDSGPQPSVTA 212

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BLAST of CsaV3_5G028660 vs. NCBI nr
Match: XP_008467163.1 (PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa] >TYK30466.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 1.8e-110
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHS EALNN E
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSAEALNN-E 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPS SAADEPPLD+EAIDSG QPSVTA
Sbjct: 181 EELQPPPSASAADEPPLDQEAIDSGPQPSVTA 211

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BLAST of CsaV3_5G028660 vs. NCBI nr
Match: XP_023520975.1 (probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 185/222 (83.33%), Postives = 200/222 (90.09%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVL++R+QRNILADKPRVTKFPINFHPENSEHG EQ  S P   VEA+NNEE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPP---VEAINNEE 180

Query: 181 EELQ----------PPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EE +          PPPS +A+DEP L+++A+D+ +QPSVTA
Sbjct: 181 EEEELQASPLPSPSPPPSATASDEPSLEQDAVDTEAQPSVTA 219

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BLAST of CsaV3_5G028660 vs. NCBI nr
Match: XP_022152274.1 (histone chaperone ASF1B-like [Momordica charantia])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 188/213 (88.26%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHG---AEQQPSSPHHSVEALN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHS E +N
Sbjct: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180

Query: 181 NEEE-ELQPPPSPSAADEPPLDKEAIDSGSQPS 210
           NEEE  LQ PPSPSAA++P LD  AIDS  QPS
Sbjct: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211

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BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot
Match: Q9LS09 (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.6e-78
Identity = 152/212 (71.70%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLTSLKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPP KVLID+VQRNIL DKPRVTKFPINFHPEN +   +    +   +   +N E 
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEPFADSVVNGEA 180

Query: 181 ----EELQPPPSPSAADEPPLDKEAIDSGSQP 209
               E+ Q        D+  ++ EAI    QP
Sbjct: 181 PVFLEQPQKLQEIEQFDDSDVNGEAIALLDQP 212

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BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot
Match: Q9C9M6 (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 147/195 (75.38%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL SLKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QL+EEPP KVLID+VQRNIL+DKPRVTKFPI+FHPE  +  A   P  P  S E   N  
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAP--PEQSDEQQPNVN 180

Query: 181 EELQPPPSPSAADEP 196
            E Q  P  S   +P
Sbjct: 181 GEAQVLPDQSVEPKP 193

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BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot
Match: Q9V464 (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53
Identity = 109/211 (51.66%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V+ITNV VLDNP++F NPFQFE+++EC+  LK+DLEWK+ YVGSAE E +DQ+L+++
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
            VGP+  G + FV QADPPD SKI E D  GVT++LLTCSY GQEFVRVGYYVNNDY D 
Sbjct: 61  YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINF---HPENSEHGAEQQPSSPHHSVEALN 180
           ++RE PP K L +++ RNILA KPRVT+F IN+   H   + +G E              
Sbjct: 121 EMRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVEN------------G 180

Query: 181 NEEEELQPPPSPSAADEPPLDKEAIDSGSQP 209
           +++E     PS S A    +  E  +S + P
Sbjct: 181 HQDEMATDGPSTSEAASAVIHPEDDNSLAMP 199

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BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot
Match: Q9DAP7 (Histone chaperone ASF1B OS=Mus musculus OX=10090 GN=Asf1b PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-52
Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V++ NV VL+NP+ F +PF+FEIS+EC  +L DDLEWK+ YVGSAE E +DQ+L+SV
Sbjct: 1   MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALSDDLEWKIIYVGSAESEEFDQILDSV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+  G + FV QAD P+PS I E D  GVTV+L+TC+Y GQEF+RVGYYVNN+Y D 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYHGQEFIRVGYYVNNEYPDP 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINF--HPENSEHGAEQQPS 168
           +LRE PPPK    ++QRNILA  PRVT+F IN+  +P++ E    Q P+
Sbjct: 121 ELRENPPPKPDFSQLQRNILASNPRVTRFHINWDNNPDSLEAIENQDPN 169

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BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot
Match: Q2KIG1 (Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.0e-52
Identity = 96/170 (56.47%), Postives = 127/170 (74.71%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V + NV VLDNP+ F NPFQFEI++EC+  L +DLEWK+ YVGSAE E YDQ+L+SV
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+  G + FV QAD P+P  I + D  GVTV+L+TC+Y GQEF+RVGYYVNN+Y + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPH 171
           +LRE PP K    ++QRNILA  PRVT+F IN+  +N+E   + + S+P+
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWE-DNTEKLEDAESSNPN 169

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BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL
Match: A0A0A0KUZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.1e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA
Sbjct: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 212

[Close]

BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL
Match: A0A5A7TY70 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00060 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 8.9e-111
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHS EALNN E
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSAEALNN-E 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPS SAADEPPLD+EAIDSG QPSVTA
Sbjct: 181 EELQPPPSASAADEPPLDQEAIDSGPQPSVTA 211

[Close]

BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL
Match: A0A1S3CSW5 (probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 8.9e-111
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHS EALNN E
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSAEALNN-E 180

Query: 181 EELQPPPSPSAADEPPLDKEAIDSGSQPSVTA 213
           EELQPPPS SAADEPPLD+EAIDSG QPSVTA
Sbjct: 181 EELQPPPSASAADEPPLDQEAIDSGPQPSVTA 211

[Close]

BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL
Match: A0A6J1DFK2 (histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.6e-98
Identity = 188/213 (88.26%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHG---AEQQPSSPHHSVEALN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHS E +N
Sbjct: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180

Query: 181 NEEE-ELQPPPSPSAADEPPLDKEAIDSGSQPS 210
           NEEE  LQ PPSPSAA++P LD  AIDS  QPS
Sbjct: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211

[Close]

BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL
Match: A0A6J1GNK0 (probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.3e-97
Identity = 183/219 (83.56%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPPPKVL++R+QRNILADKPRVTKFPINFHPENSEHG EQ  S P  ++     EE
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGGEQNSSPPAEAINNEEEEE 180

Query: 181 EELQ--PPPSPS-----AADEPPLDKEAIDSGSQPSVTA 213
           EELQ  P PSPS     A+DEP L+++A+D+ +QPSVTA
Sbjct: 181 EELQASPLPSPSPPPSAASDEPSLEQDAVDTEAQPSVTA 219

[Close]

BLAST of CsaV3_5G028660 vs. TAIR 10
Match: AT5G38110.1 (anti- silencing function 1b )

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-79
Identity = 152/212 (71.70%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLTSLKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QLREEPP KVLID+VQRNIL DKPRVTKFPINFHPEN +   +    +   +   +N E 
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEPFADSVVNGEA 180

Query: 181 ----EELQPPPSPSAADEPPLDKEAIDSGSQP 209
               E+ Q        D+  ++ EAI    QP
Sbjct: 181 PVFLEQPQKLQEIEQFDDSDVNGEAIALLDQP 212

[Close]

BLAST of CsaV3_5G028660 vs. TAIR 10
Match: AT1G66740.1 (ASF1 like histone chaperone )

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-78
Identity = 147/195 (75.38%), Postives = 160/195 (82.05%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL SLKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120
           LVGP+NVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGAEQQPSSPHHSVEALNNEE 180
           QL+EEPP KVLID+VQRNIL+DKPRVTKFPI+FHPE  +  A   P  P  S E   N  
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEEEQTAATAAP--PEQSDEQQPNVN 180

Query: 181 EELQPPPSPSAADEP 196
            E Q  P  S   +P
Sbjct: 181 GEAQVLPDQSVEPKP 193

The following BLAST results are available for this feature:

BLAST of CsaV3_5G028660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150672.1	1.9e-115	100.00	probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical prot...	[more]
XP_038875350.1	2.8e-111	96.23	probable histone chaperone ASF1A [Benincasa hispida]	[more]
XP_008467163.1	1.8e-110	96.70	PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putativ...	[more]
XP_023520975.1	2.7e-98	83.33	probable histone chaperone ASF1A [Cucurbita pepo subsp. pepo]	[more]
XP_022152274.1	1.8e-97	88.26	histone chaperone ASF1B-like [Momordica charantia]	[more]

BLAST of CsaV3_5G028660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS09	5.6e-78	71.70	Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1	[more]
Q9C9M6	1.6e-77	75.38	Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 S...	[more]
Q9V464	2.1e-53	51.66	Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1	[more]
Q9DAP7	3.1e-52	57.99	Histone chaperone ASF1B OS=Mus musculus OX=10090 GN=Asf1b PE=1 SV=1	[more]
Q2KIG1	4.0e-52	56.47	Histone chaperone ASF1A OS=Bos taurus OX=9913 GN=ASF1A PE=2 SV=1	[more]

BLAST of CsaV3_5G028660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUZ5	9.1e-116	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1	[more]
A0A5A7TY70	8.9e-111	96.70	Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CSW5	8.9e-111	96.70	probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV...	[more]
A0A6J1DFK2	8.6e-98	88.26	histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3...	[more]
A0A6J1GNK0	7.3e-97	83.56	probable histone chaperone ASF1A OS=Cucurbita moschata OX=3662 GN=LOC111455553 P...	[more]

BLAST of CsaV3_5G028660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38110.1	4.0e-79	71.70	anti- silencing function 1b	[more]
AT1G66740.1	1.2e-78	75.38	ASF1 like histone chaperone	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006818	Histone chaperone ASF1-like	PFAM	PF04729	ASF1_hist_chap	coord: 1..153 e-value: 5.0E-70 score: 234.3
IPR006818	Histone chaperone ASF1-like	PANTHER	PTHR12040	ANTI-SILENCING PROTEIN 1	coord: 1..186
IPR036747	Histone chaperone ASF1-like superfamily	GENE3D	2.60.40.1490		coord: 1..157 e-value: 4.3E-76 score: 256.0
IPR036747	Histone chaperone ASF1-like superfamily	SUPERFAMILY	101546	ASF1-like	coord: 1..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..173
None	No IPR available	PANTHER	PTHR12040:SF18	HISTONE CHAPERONE ASF1B-RELATED	coord: 1..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G028660.1	CsaV3_5G028660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006333	chromatin assembly or disassembly
cellular_component	GO:0005634	nucleus