CsaV3_5G025740 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G025740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr5: 20901153 .. 20903459 (-)
RNA-Seq Expression	CsaV3_5G025740
Synteny	CsaV3_5G025740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACCACGCAATTCCAAGATCCTTGATTCTCGATATTCCACGTAAGCAAATAAAATGGATTGAGAAGTTCCAAGTGGCCCAATGAGATCACAAAACCAACCCACAATTAGCCAATGAAAATCAAACTTTAGATTCCCCAATCTCTCTACTGCAACTGCTTTTAGTCCCCTTCCTCTCCCTTCTTCTTCCTCCATTCTCACACCCTCACTCTCACTCTCTCAATCTCTTCTCTCTTTTTCTTCAATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCTGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGGTATTCAATTTTGAAATGACTTTTGTTTGTTTAATCTGGTGGGGTTTGTTAACGTAGGATGATGATTGCTTTTTCTAGGCCTTTGAGGAAATGTCCAAGAGAGTCCTGATACTCTTTGTGGATGCTTTGATTTGTCCTTGACTCCATGAAATCGTTATATGTGTGAATCTAAACTTACATAATTTTTTTTTTTTATAATTATTTGGCAAGATTTAAGTTTATAAACATTACTCAGCCTATATTTTCTTTTACCAATATTTTTAAAAATCAAGCTAAGTTTTCATAACTAAAAGAAGTAGTTTTTTTATGTTCTTTTGAACATAACTAAGAACTCAAGCCTTTCGTCAAAAGGGAAAACCTTGAGAGAAAGCAAACATAAATTCCATAAACTAAGAATGAAAGAGAAAATCATATCAAACTGGCCTCAGTTTTTGTCATGCTTAGTGATGATTAATTTACCCTTATTTATTAGCTGTAGTTTTTGGATAAGTAATGAATTAGAATCGATTAAACGTTTGAGATCTGTGGTCATGTTCAACAGTGATTTTGGATTCGACCCTCTTGGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTGTAAGCTTACCAAATTCAGTTGCTTGATTCCGAGATTGATGGGGGCTTTTCCTTTTTCATTTTCCAATGCTGTTCCTTTTGTTTTTCAGCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTAACTGCTCTCATTTTTTTCATAGCAATTAGAGAAGAATTGAACTTTTGATTACTTTTGACTCAAATGGTTATCTTATAATGAAAAACATTTGATACTAATTATCAAACACTTACGGGTTTGTAGGTCGATTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCGTTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATTCCCAGAACAATTTCGCCTTGAATTTTGTACTGAATCATACCAATTGTAATTAAGTTTCTGTGTATTAAATCTGAACTCAAGGCTTTCCTCTCTATGTGCCTTTGAACGTGCTCTGTAACTTGATTTTGACCTTCATTTTAGTGCATGGTGTTACAATTTGAGGAAGGAAAAAAAGGGATAAGATTACAAATTTAATCTTAAAGCTTTGGATTGTATGTCTATTTGGTTAATTTTTATTTATAAGAGAACACATGCATGATAAGTACAATCAAATCATTATCAAAATTTTGTTAGAACATTGAGTAGAAATTGCATCGTGAACAATATTCCCTCTAAAACTGTCCATGAGACAAATTATGAATTATAGACGTATAGTGAAACTAGGCAACGATAATTTAGGATTCGAAAATATTTAAGGGCACAAGCTGAAACAATCCCCAAACTGTATATATATGTTGAAAGATATGCTAAGTGTAGGCTTGTCTTTGAGAAGAAAGAAAATGGTTTTTTATACCCTCATAGACACAAAATAATGTGTTTGTACGACAAGAATATAATTTTGGGACGCTTAAAAAATAGAAAAAAA

mRNA sequence

ATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCTGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTGGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGATTGGCGCTATTGGCTTTTGTTGGTTTCTGTGTATTAAATCTGAACTCAAGGCTTTCCTCTCTATGTGCCTTTGAACGTGCTCTGTAA

Coding sequence (CDS)

ATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCTGTCGGTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCGCTGAGTGGATGCCCGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTGGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTTAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCCGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGATCCATTAGGCTACTCAAAAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGATTGGCGCTATTGGCTTTTGTTGGTTTCTGTGTATTAAATCTGAACTCAAGGCTTTCCTCTCTATGTGCCTTTGAACGTGCTCTGTAA

Protein sequence

MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVLNLNSRLSSLCAFERAL*

Homology

[Close]

BLAST of CsaV3_5G025740 vs. NCBI nr
Match: KGN51621.2 (hypothetical protein Csa_008760 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 3.7e-125
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVLNLNSRLSSLCAFERAL 227
           KDPEKLKEYKVKEIKNGRLALLAFVGFCVLNLNSRLSSLCAFERAL
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVLNLNSRLSSLCAFERAL 226

[Close]

BLAST of CsaV3_5G025740 vs. NCBI nr
Match: XP_004143800.1 (chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. NCBI nr
Match: XP_008453995.1 (PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA0048040.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 418.3 bits (1074), Expect = 4.2e-113
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. NCBI nr
Match: XP_038891246.1 (chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida])

HSP 1 Score: 417.9 bits (1073), Expect = 5.5e-113
Identity = 204/209 (97.61%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGS+PGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSSPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. NCBI nr
Match: TYJ96496.1 (chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 417.2 bits (1071), Expect = 9.4e-113
Identity = 205/209 (98.09%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSFEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot
Match: P12360 (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB6A PE=2 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.7e-99
Identity = 178/209 (85.17%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGI     PS LSS+KSKFA  +P+   A N  SRFSMSA+WMPGQPRP YL
Sbjct: 1   MASNTLMSCGIPAVC-PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFD LGLGEVP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AA+PGGQATYLGQPVPWGTLPTIL IEFLAIAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDP K +E KVKEIKNGRLALLA VGFCV
Sbjct: 181 KDPAKFEELKVKEIKNGRLALLAIVGFCV 208

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.5e-97
Identity = 176/210 (83.81%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           SKDP+KL+E KVKEIKNGRLALLAFVGFCV
Sbjct: 181 SKDPKKLEELKVKEIKNGRLALLAFVGFCV 207

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot
Match: Q9SDM1 (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-83
Identity = 151/208 (72.60%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 2   ASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYLD 61
           +S+ L SC  +    PS+L+ S      G+P    A   S R +MSAEW PGQPRP +LD
Sbjct: 3   SSSGLRSC--SAVGVPSLLAPSSRSGRSGLPFCAYA-TTSGRVTMSAEWFPGQPRPAHLD 62

Query: 62  GSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 121
           GS+PGDFGFDPLGL  VPEN ERFKESE+ HCRWAML VPG+LVPEALGLGNWVKAQEWA
Sbjct: 63  GSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWA 122

Query: 122 AVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 181
           A+P GQATYLG PVPWG LPTIL IEFLAIAF E QR+MEKDPEKKKYPGGAFDPLG+SK
Sbjct: 123 ALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSK 182

Query: 182 DPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           DP K +E K+KEIKNGRLA+LAFVGFCV
Sbjct: 183 DPAKFEELKLKEIKNGRLAMLAFVGFCV 207

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot
Match: Q9S7W1 (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.3 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.2e-31
Identity = 81/203 (39.90%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 50  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE----------------------------- 109
           W PG   P +LDGS  GD GFDP GLG+  E                             
Sbjct: 59  WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118

Query: 110 --------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGG 169
                          ++RF+E ELIH RWAML   G +  EAL    W  A +   V G 
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 178

Query: 170 QATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKL 210
            ++YLGQP+P+ +L T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG + DPEKL
Sbjct: 179 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 238

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot
Match: Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 81/204 (39.71%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 50  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE----------------------------- 109
           W PG   P +LDGS  GD+GFDP GLG+  E                             
Sbjct: 58  WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117

Query: 110 --------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGG 169
                          ++RF+E ELIH RWAMLA  G L  E L    W  A +   V G 
Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG- 177

Query: 170 QATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPEK 210
            ++YLGQP+P+ ++ T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DPEK
Sbjct: 178 -SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEK 237

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL
Match: A0A0A0KNM4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G490820 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-116
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL
Match: A0A5A7TXV7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001080 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL
Match: A0A1S3BYE0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494548 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.0e-113
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS+EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL
Match: A0A5D3BC57 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001420 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.5e-113
Identity = 205/209 (98.09%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMS EWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSFEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL
Match: A0A6J1BW39 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006054 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-113
Identity = 204/209 (97.61%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60
           MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGV  NASSRFSMSAEWMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYL 60

Query: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120
           DGSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180
           AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           KDPEKLKEYKVKEIKNGRLALLAFVGFCV
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCV 209

[Close]

BLAST of CsaV3_5G025740 vs. TAIR 10
Match: AT3G54890.1 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 354.8 bits (909), Expect = 5.3e-98
Identity = 176/210 (83.81%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
           SKDP+KL+E KVKEIKNGRLALLAFVGFCV
Sbjct: 181 SKDPKKLEELKVKEIKNGRLALLAFVGFCV 207

[Close]

BLAST of CsaV3_5G025740 vs. TAIR 10
Match: AT3G54890.4 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 332.8 bits (852), Expect = 2.2e-91
Identity = 164/199 (82.41%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180

Query: 181 SKDPEKLKEYKVKEIKNGR 199
           SKDP+KL+E KVKEIKNG+
Sbjct: 181 SKDPKKLEELKVKEIKNGK 196

[Close]

BLAST of CsaV3_5G025740 vs. TAIR 10
Match: AT3G54890.2 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-72
Identity = 144/210 (68.57%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 180
           WAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF                          
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAF-------------------------- 173

Query: 181 SKDPEKLKEYKVKEIKNGRLALLAFVGFCV 210
                   E KVKEIKNGRLALLAFVGFCV
Sbjct: 181 --------ELKVKEIKNGRLALLAFVGFCV 173

[Close]

BLAST of CsaV3_5G025740 vs. TAIR 10
Match: AT3G54890.3 (photosystem I light harvesting complex gene 1 )

HSP 1 Score: 241.1 bits (614), Expect = 8.6e-64
Identity = 120/151 (79.47%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 1   MASNTLMSCGIATTAFPSVLSSSKSKF-AVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 60
           MASN+LMSCGIA   +PS+LSSSKSKF + GVP+         R  M+A WMPG+PRP Y
Sbjct: 1   MASNSLMSCGIA-AVYPSLLSSSKSKFVSAGVPLPN--AGNVGRIRMAAHWMPGEPRPAY 60

Query: 61  LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 120
           LDGSAPGDFGFDPLGLGEVP NLER+KESELIHCRWAMLAVPGILVPEALG GNWVKAQE
Sbjct: 61  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 120

Query: 121 WAAVPGGQATYLGQPVPWGTLPTILVIEFLA 151
           WAA+PGGQATYLG PVPWGTLPTIL IEFLA
Sbjct: 121 WAALPGGQATYLGNPVPWGTLPTILAIEFLA 148

[Close]

BLAST of CsaV3_5G025740 vs. TAIR 10
Match: AT2G40100.1 (light harvesting complex photosystem II )

HSP 1 Score: 136.3 bits (342), Expect = 3.0e-32
Identity = 81/203 (39.90%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 50  WMPGQPRPPYLDGSAPGDFGFDPLGLGEVPE----------------------------- 109
           W PG   P +LDGS  GD GFDP GLG+  E                             
Sbjct: 59  WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118

Query: 110 --------------NLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGG 169
                          ++RF+E ELIH RWAML   G +  EAL    W  A +   V G 
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 178

Query: 170 QATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKL 210
            ++YLGQP+P+ +L T++ IE L + ++E QR+ E DPEK+ YPGG FDPLG + DPEKL
Sbjct: 179 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 238

The following BLAST results are available for this feature:

BLAST of CsaV3_5G025740 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51621.2	3.7e-125	100.00	hypothetical protein Csa_008760 [Cucumis sativus]	[more]
XP_004143800.1	1.5e-115	100.00	chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]	[more]
XP_008453995.1	4.2e-113	98.09	PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo] >KAA...	[more]
XP_038891246.1	5.5e-113	97.61	chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]	[more]
TYJ96496.1	9.4e-113	98.09	chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_5G025740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12360	4.7e-99	85.17	Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
Q01667	7.5e-97	83.81	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9SDM1	1.2e-83	72.60	Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare OX=4513 ...	[more]
Q9S7W1	4.2e-31	39.90	Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q07473	2.1e-30	39.71	Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_5G025740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNM4	7.5e-116	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7TXV7	2.0e-113	98.09	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BYE0	2.0e-113	98.09	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BC57	4.5e-113	98.09	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BW39	7.7e-113	97.61	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of CsaV3_5G025740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54890.1	5.3e-98	83.81	photosystem I light harvesting complex gene 1	[more]
AT3G54890.4	2.2e-91	82.41	photosystem I light harvesting complex gene 1	[more]
AT3G54890.2	2.2e-72	68.57	photosystem I light harvesting complex gene 1	[more]
AT3G54890.3	8.6e-64	79.47	photosystem I light harvesting complex gene 1	[more]
AT2G40100.1	3.0e-32	39.90	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 57..209 e-value: 4.4E-47 score: 160.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 51..220 e-value: 7.9E-69 score: 233.2
None	No IPR available	PANTHER	PTHR21649:SF89	CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC	coord: 32..209
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 40..212
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 32..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G025740.1	CsaV3_5G025740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0016020	membrane