CsaV3_5G025360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G025360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 20424366 .. 20424589 (+)
RNA-Seq ExpressionCsaV3_5G025360
SyntenyCsaV3_5G025360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACACAACTCTCCGTCCACCATGTCTTCATTGCCAACCAAGTCCTCCGTTGTACTTTGCTACACGAGGACGTCGATCTCCTTGCCGTCGACGAAGCCTCCAGCCGCACGCAGTCGACGTTCAAAGATTTGAACCAATCCTCTTTTGAACTTGAGCCATCAACTTCAGTTCCAAGCTGGACAATTTGCTTCTTGTCTAGCTGTCCGATCCGTGTCCCTAGATAA

mRNA sequence

ACACAACTCTCCGTCCACCATGTCTTCATTGCCAACCAAGTCCTCCGTTGTACTTTGCTACACGAGGACGTCGATCTCCTTGCCGTCGACGAAGCCTCCAGCCGCACGCAGTCGACGTTCAAAGATTTGAACCAATCCTCTTTTGAACTTGAGCCATCAACTTCAGTTCCAAGCTGGACAATTTGCTTCTTGTCTAGCTGTCCGATCCGTGTCCCTAGATAA

Coding sequence (CDS)

ACACAACTCTCCGTCCACCATGTCTTCATTGCCAACCAAGTCCTCCGTTGTACTTTGCTACACGAGGACGTCGATCTCCTTGCCGTCGACGAAGCCTCCAGCCGCACGCAGTCGACGTTCAAAGATTTGAACCAATCCTCTTTTGAACTTGAGCCATCAACTTCAGTTCCAAGCTGGACAATTTGCTTCTTGTCTAGCTGTCCGATCCGTGTCCCTAGATAA

Protein sequence

TQLSVHHVFIANQVLRCTLLHEDVDLLAVDEASSRTQSTFKDLNQSSFELEPSTSVPSWTICFLSSCPIRVPR*
Homology
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BLAST of CsaV3_5G025360 vs. NCBI nr
Match: KAE8648491.1 (hypothetical protein Csa_023650, partial [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  TQLSVHHVFIANQVLRCTLLHEDVDLLAVDEASSRTQSTFKDLNQSSFELEPSTSVPSWT 60
          TQLSVHHVFIANQVLRCTLLHEDVDLLAVDEASSRTQSTFKDLNQSSFELEPSTSVPSWT
Sbjct: 1  TQLSVHHVFIANQVLRCTLLHEDVDLLAVDEASSRTQSTFKDLNQSSFELEPSTSVPSWT 60

Query: 61 ICFLSSCPIRVPR 74
          ICFLSSCPIRVPR
Sbjct: 61 ICFLSSCPIRVPR 73

The following BLAST results are available for this feature:
BLAST of CsaV3_5G025360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648491.12.6e-32100.00hypothetical protein Csa_023650, partial [Cucumis sativus][more]
BLAST of CsaV3_5G025360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G025360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G025360 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G025360.1CsaV3_5G025360.1mRNA