CsaV3_5G023810 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCCCTCTCTTCTTTTGGACTCTCTCATTTAAATATATTTCTTAAAGAAAACAAAACATAGTAATTAAGCCTTCTCTTCATTAATATATATAACCCCATTATTCCTCCATTTCTTTAAAAAAGAAAAAGAAAAAGAAAAAGAAGAAAAAACCCATCCCCATTTCTTCAATCTCTCTCTAAATTTGAAGAATTTAAAATATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGACCTAATGGAACCCTGAAAGCCGTTGGAGGCTAACCAAAT ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPPPIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGFVLGVAV* Homology
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_011656213.1 (uncharacterized protein LOC105435672 [Cucumis sativus] >KGN51020.1 hypothetical protein Csa_008862 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 5.0e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: KAA0062390.1 (DUF3049 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60 Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_008460498.1 (PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_038876069.1 (uncharacterized protein LOC120068390 [Benincasa hispida]) HSP 1 Score: 135.2 bits (339), Expect = 4.0e-28 Identity = 85/147 (57.82%), Postives = 100/147 (68.03%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.8 bits (312), Expect = 5.4e-25 Identity = 77/146 (52.74%), Postives = 86/146 (58.90%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. ExPASy TrEMBL
Match: A0A0A0KN42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409630 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. ExPASy TrEMBL
Match: A0A5A7V582 (DUF3049 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001680 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.5e-61 Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. ExPASy TrEMBL
Match: A0A1S3CCL8 (uncharacterized protein LOC103499298 OS=Cucumis melo OX=3656 GN=LOC103499298 PE=3 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. ExPASy TrEMBL
Match: A0A6J1JUP6 (uncharacterized protein LOC111489066 OS=Cucurbita maxima OX=3661 GN=LOC111489066 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.6e-25 Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. ExPASy TrEMBL
Match: A0A6J1FP95 (uncharacterized protein LOC111445672 OS=Cucurbita moschata OX=3662 GN=LOC111445672 PE=3 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 9.9e-25 Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome ) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR 10
Match: AT1G77932.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 50.8 bits (120), Expect = 9.2e-07 Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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