CsaV3_5G014640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAGTAGGTGAGCCAGGAAGGCTTTAATTTTTGAAAACTTTAAGAGATGACTTCTTTTACAAAGCTATATATGCTTGGATTAACAATTTTTTTCTTTTTTTTTGCTTAGTTTATATAAAATTTCAAAATTATTTTTATAATATCCAAAATCTTAATGGCATTATTGGTAATTTCATCAAAATTCAAACCCAAATTCTTAAGGGTAAAAAACTCTTTATTAATAACCCCCAACCCACCTCCATTCCAAATCAAACCCAACCCAACAAAAAGCATTCACAATAGTATATTTCATATACAACAAAAGGCAAAAAAAAACAAAAAAGGAAAAGAGAAAAAAGGAAAAAACACAAAGAGGAAAAATGTCTCTCATCACAGAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA ATGATACTAAGCTTTAAATCTGTCGAACGCTTTAAATCTGTCGAACAAAAAGAGCTGAAAGCCAAAGCTGATGAAGTGTATTATGGTGACAAGATCTCACAAGAGAAAACAAGGCTTCTTCTAAAAGAAGTGGGACTTCCAAATGGGCTTTTGCCATTGAAAGACGTAATAGAATGTGGCTATGTGAAGGAGACTGGCTTCGTTTGGATGAAACAAAAGAAAGCCATAACCCACAAATTCAACAAGATTGGTAAGCAAGTGAGTTATGCAAAAGAAGTCACTGCCAATGTAGAGAAGAATAAAGTCAAGAATTTGACTGGTGTTAAGGCTAAGGAGGTTTTGATTTGGCTCACTTTGTCCGAGATCTATGTGGACGACCCACCAACCGGGAATATTACCTTTAAGATCCCTACTGGGCTCTCCAGGGCTTACCCGGTCAATGCATTTGAGGTCGAGGAGGAGGAGACGGCCACGGCAACGGAGAAGAAGGAAGTGAAAGAGGAGGAGGGAGTGAAGGAGAAGGAGGTGAGAGAGGTGAGTAATGGAGGGAGTGTGGTGGTGAATGTGAAAGAGGTTTGA MILSFKSVERFKSVEQKELKAKADEVYYGDKISQEKTRLLLKEVGLPNGLLPLKDVIECGYVKETGFVWMKQKKAITHKFNKIGKQVSYAKEVTANVEKNKVKNLTGVKAKEVLIWLTLSEIYVDDPPTGNITFKIPTGLSRAYPVNAFEVEEEETATATEKKEVKEEEGVKEKEVREVSNGGSVVVNVKEV* Homology
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: KAE8648190.1 (hypothetical protein Csa_018492 [Cucumis sativus]) HSP 1 Score: 365.5 bits (937), Expect = 2.7e-97 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_004142271.1 (uncharacterized protein LOC101204611 [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_008464697.1 (PREDICTED: uncharacterized protein LOC103502519 [Cucumis melo] >KAA0041018.1 uncharacterized protein E6C27_scaffold125G002460 [Cucumis melo var. makuwa] >TYK20377.1 uncharacterized protein E5676_scaffold228G00810 [Cucumis melo var. makuwa]) HSP 1 Score: 303.9 bits (777), Expect = 9.8e-79 Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_038892753.1 (uncharacterized protein LOC120081726 [Benincasa hispida]) HSP 1 Score: 300.8 bits (769), Expect = 8.3e-78 Identity = 161/178 (90.45%), Postives = 169/178 (94.94%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. NCBI nr
Match: XP_022942634.1 (uncharacterized protein LOC111447611 [Cucurbita moschata]) HSP 1 Score: 291.6 bits (745), Expect = 5.0e-75 Identity = 152/180 (84.44%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. ExPASy TrEMBL
Match: A0A0A0KMJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G029450 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 8.6e-89 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. ExPASy TrEMBL
Match: A0A5A7TDH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00810 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79 Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. ExPASy TrEMBL
Match: A0A1S3CM20 (uncharacterized protein LOC103502519 OS=Cucumis melo OX=3656 GN=LOC103502519 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.7e-79 Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. ExPASy TrEMBL
Match: A0A6J1FRW2 (uncharacterized protein LOC111447611 OS=Cucurbita moschata OX=3662 GN=LOC111447611 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75 Identity = 152/180 (84.44%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. ExPASy TrEMBL
Match: A0A6J1JWS7 (uncharacterized protein LOC111489547 OS=Cucurbita maxima OX=3661 GN=LOC111489547 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74 Identity = 152/180 (84.44%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR 10
Match: AT1G09310.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 171.4 bits (433), Expect = 7.1e-43 Identity = 92/162 (56.79%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR 10
Match: AT1G56580.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 165.6 bits (418), Expect = 3.9e-41 Identity = 95/161 (59.01%), Postives = 118/161 (73.29%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR 10
Match: AT5G46230.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR 10
Match: AT4G24130.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 117.9 bits (294), Expect = 9.3e-27 Identity = 55/131 (41.98%), Postives = 88/131 (67.18%), Query Frame = 0
BLAST of CsaV3_5G014640 vs. TAIR 10
Match: AT5G49600.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 111.7 bits (278), Expect = 6.7e-25 Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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